##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727339.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3970667 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.382377822164386 31.0 31.0 34.0 30.0 34.0 2 31.56137847872914 31.0 31.0 34.0 30.0 34.0 3 31.61907281572592 31.0 31.0 34.0 30.0 34.0 4 35.384838114100226 37.0 35.0 37.0 33.0 37.0 5 35.00865622828608 37.0 35.0 37.0 32.0 37.0 6 35.00747355545051 36.0 35.0 37.0 32.0 37.0 7 34.9775803410359 36.0 35.0 37.0 32.0 37.0 8 34.91091899673279 35.0 35.0 37.0 32.0 37.0 9 36.524983837728016 38.0 35.0 39.0 32.0 39.0 10 36.20485701772523 38.0 35.0 39.0 32.0 39.0 11 36.37382611032353 38.0 35.0 39.0 32.0 39.0 12 36.24557637293684 38.0 35.0 39.0 32.0 39.0 13 36.33912060618531 38.0 35.0 39.0 32.0 39.0 14 37.25215159065215 39.0 36.0 40.0 32.0 41.0 15 37.189670148617346 39.0 36.0 40.0 32.0 41.0 16 37.08619886784764 38.0 36.0 40.0 32.0 41.0 17 37.03222934585046 38.0 36.0 40.0 32.0 41.0 18 36.95570215281211 38.0 36.0 40.0 31.0 41.0 19 36.96712365957659 39.0 36.0 40.0 31.0 41.0 20 36.80715733653817 39.0 36.0 40.0 31.0 41.0 21 36.70251270126656 38.0 36.0 40.0 31.0 41.0 22 36.60387511720323 38.0 36.0 40.0 30.0 41.0 23 36.46915341931217 38.0 35.0 40.0 30.0 41.0 24 36.314568559891825 38.0 35.0 40.0 30.0 41.0 25 36.223616082638 38.0 35.0 40.0 30.0 41.0 26 35.79732699820962 38.0 34.0 40.0 28.0 41.0 27 35.512628482821654 38.0 34.0 40.0 27.0 41.0 28 35.327238975214996 38.0 34.0 40.0 27.0 41.0 29 35.24079833438563 38.0 34.0 40.0 27.0 41.0 30 35.15170247215392 38.0 34.0 40.0 26.0 41.0 31 34.879696786459306 38.0 33.0 40.0 25.0 41.0 32 34.75426244507535 38.0 33.0 40.0 25.0 40.0 33 34.54648350012731 38.0 33.0 40.0 24.0 40.0 34 34.35821815327249 37.0 33.0 40.0 24.0 40.0 35 34.18120230177952 37.0 33.0 40.0 24.0 40.0 36 33.989894393057895 37.0 32.0 39.0 23.0 40.0 37 33.71254703554843 37.0 32.0 39.0 22.0 40.0 38 33.58282827545095 37.0 31.0 39.0 22.0 40.0 39 33.35264604158445 37.0 31.0 39.0 20.0 40.0 40 33.217261986462226 37.0 31.0 39.0 20.0 40.0 41 33.03356866743044 36.0 31.0 39.0 19.0 40.0 42 32.81105189631868 36.0 30.0 39.0 18.0 40.0 43 29.74604543770606 33.0 25.0 38.0 9.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 20.0 11 32.0 12 26.0 13 57.0 14 115.0 15 264.0 16 467.0 17 783.0 18 1532.0 19 2904.0 20 5069.0 21 8624.0 22 13680.0 23 20741.0 24 29470.0 25 39994.0 26 52563.0 27 68048.0 28 85857.0 29 106510.0 30 131053.0 31 159282.0 32 196110.0 33 241634.0 34 307106.0 35 402958.0 36 553965.0 37 737904.0 38 677432.0 39 126464.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.75733371748374 19.88673439500215 13.413741318524067 25.942190568990046 2 19.403893602762455 22.319172068571856 34.042643213344256 24.23429111532143 3 18.799284855667825 22.75272643110087 31.52850641970228 26.919482293529022 4 15.149772066003017 16.710315924251518 33.66162410496775 34.47828790477771 5 14.192300689027812 37.78962073626421 34.03808478525144 13.979993789456532 6 35.19645439922311 36.64744487513055 14.049553891071701 14.106546834574646 7 29.49640450836094 32.09740328262229 19.873713912549203 18.532478296467573 8 28.064277361964628 35.55254066885992 18.417837607636198 17.965344361539255 9 27.959534254572343 13.376039844187387 17.757797367545553 40.906628533694715 10 15.41282610704952 28.415704464766243 33.41839041148502 22.75307901669921 11 37.92584470065105 21.087792051058425 20.826576492060404 20.159786756230126 12 21.753926985063217 25.715478029258055 29.491569048726575 23.039025936952154 13 32.405512726199404 19.995129281805802 23.066426874880218 24.532931117114583 14 22.113790957539376 20.798596306363642 25.83606230389 31.251550432206983 15 26.075921249502915 28.539512379154434 21.325006604683796 24.05955976665885 16 24.547714527559222 26.913916478012386 23.906159846695783 24.63220914773261 17 25.0046150936354 26.410524982326645 24.311003667645764 24.273856256392186 18 24.57126220859115 25.830546857744558 25.23210835862086 24.36608257504344 19 26.349804705355552 25.397697666412217 25.26326181470267 22.989235813529564 20 25.053977077402866 25.224880353854907 25.208762155073693 24.512380413668534 21 24.89770610328189 25.592803425721673 25.84019259232769 23.669297878668747 22 25.52122854925885 25.275627495330127 24.579573154837714 24.623570800573304 23 24.724964344781366 25.3856593866975 25.197957924953162 24.69141834356797 24 24.3495362366071 25.33367819562809 25.35367483599103 24.96311073177378 25 24.75375044041719 24.830765208968668 25.349267516011793 25.066216834602344 26 24.361221930723477 25.18619667678 25.565729888706358 24.88685150379017 27 25.22102709695877 25.686163055224725 24.92953954587479 24.163270301941715 28 24.398822666317773 25.972235898905648 24.77807884670258 24.850862588073994 29 24.67361277085185 26.01857572040164 25.098125831252027 24.209685677494484 30 25.2029444927011 25.788765464341378 24.60140827724914 24.40688176570838 31 24.88916849486497 24.995397498707398 25.269356508616813 24.84607749781082 32 24.284912333368673 25.752675809882824 24.9994270484027 24.9629848083458 33 24.543962009405472 24.706226938698208 25.39601029247731 25.35380075941901 34 24.799460644773283 25.010609048807165 26.03393837861498 24.155991927804575 35 24.76838274274826 24.95681456037487 25.538555612948656 24.736247083928216 36 24.287632279413003 24.54801674378637 26.103725142400506 25.060625834400113 37 24.08310744769078 24.602642326843323 26.210936348981168 25.103313876484734 38 24.22671052495714 24.063992271323684 26.451072326135634 25.25822487758354 39 23.575761956366527 24.221623218466824 27.126273746954855 25.076341078211794 40 24.150778697886274 23.57520789328342 27.417786482724438 24.856226926105865 41 23.46915518224016 23.703700159192397 27.83582707892654 24.9913175796409 42 23.00628584567782 23.8470765742884 27.73944528715201 25.407192292881774 43 23.000971877017136 22.943676717287044 27.554614879565577 26.500736526130243 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 622.0 1 567.5 2 513.0 3 917.0 4 1321.0 5 1321.0 6 1634.5 7 1948.0 8 2261.0 9 2574.0 10 3649.5 11 4725.0 12 4725.0 13 8505.0 14 12285.0 15 20434.5 16 28584.0 17 23622.5 18 18661.0 19 18661.0 20 22204.0 21 25747.0 22 25420.0 23 25093.0 24 30262.0 25 35431.0 26 35431.0 27 42977.5 28 50524.0 29 58946.0 30 67368.0 31 78969.0 32 90570.0 33 90570.0 34 102692.0 35 114814.0 36 129522.5 37 144231.0 38 161312.0 39 178393.0 40 178393.0 41 201059.0 42 223725.0 43 244077.0 44 264429.0 45 285974.0 46 307519.0 47 307519.0 48 327576.5 49 347634.0 50 357206.5 51 366779.0 52 357400.0 53 348021.0 54 348021.0 55 328284.0 56 308547.0 57 288715.0 58 268883.0 59 244195.5 60 219508.0 61 219508.0 62 191504.0 63 163500.0 64 139164.0 65 114828.0 66 95548.5 67 76269.0 68 76269.0 69 62678.0 70 49087.0 71 41301.5 72 33516.0 73 28510.5 74 23505.0 75 23505.0 76 20477.5 77 17450.0 78 14885.0 79 12320.0 80 10287.5 81 8255.0 82 8255.0 83 6740.0 84 5225.0 85 4286.5 86 3348.0 87 3003.5 88 2659.0 89 2659.0 90 2013.5 91 1368.0 92 989.0 93 610.0 94 400.5 95 191.0 96 191.0 97 129.5 98 68.0 99 43.5 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3970667.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.24927625346099 #Duplication Level Percentage of deduplicated Percentage of total 1 86.03618726278327 55.27762763241064 2 7.561301603233255 9.716163110837416 3 2.3249868979621438 4.481361764785414 4 1.1723881343457576 3.0130035647944124 5 0.6621779016508176 2.1272225466050245 6 0.441952622354773 1.7037081674767998 7 0.3109128693021316 1.3983148781384203 8 0.23221919301554309 1.1935932066729125 9 0.17153115402582414 0.9918677250972129 >10 0.9965847913073346 11.510325443358264 >50 0.05819518749104047 2.5404300644978335 >100 0.028581117122828226 3.414615808994675 >500 0.0018436773282143116 0.8552698140734264 >1k 9.806793768092036E-4 0.8628811394055736 >5k 1.1768152521709971E-4 0.4710473609104092 >10k+ 3.9227175072366566E-5 0.4425677719415081 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17560 0.44224307905951316 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7698 0.19387170971526949 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5788 0.14576896022758895 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5204 0.1310611038397327 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5184685595644257E-5 2 0.0 0.0 0.0 0.0 2.5184685595644257E-5 3 0.0 0.0 0.0 0.0 2.5184685595644257E-5 4 0.0 0.0 0.0 0.0 2.5184685595644257E-5 5 0.0 0.0 0.0 0.0 2.5184685595644257E-5 6 2.5184685595644257E-5 0.0 0.0 0.0 5.036937119128851E-5 7 5.036937119128851E-5 0.0 0.0 0.0 5.036937119128851E-5 8 5.036937119128851E-5 0.0 0.0 0.0 5.036937119128851E-5 9 5.036937119128851E-5 0.0 0.0 0.0 5.036937119128851E-5 10 1.2592342797822128E-4 0.0 0.0 0.0 5.036937119128851E-5 11 2.2666217036079834E-4 0.0 0.0 0.0 5.036937119128851E-5 12 2.2666217036079834E-4 0.0 0.0 2.5184685595644257E-5 5.036937119128851E-5 13 2.2666217036079834E-4 2.5184685595644257E-5 0.0 2.5184685595644257E-5 5.036937119128851E-5 14 2.2666217036079834E-4 2.5184685595644257E-5 0.0 5.036937119128851E-5 7.555405678693277E-5 15 2.2666217036079834E-4 2.5184685595644257E-5 0.0 7.555405678693277E-5 7.555405678693277E-5 16 2.2666217036079834E-4 2.5184685595644257E-5 0.0 3.022162271477311E-4 1.2592342797822128E-4 17 2.2666217036079834E-4 2.5184685595644257E-5 0.0 4.533243407215967E-4 1.2592342797822128E-4 18 2.2666217036079834E-4 2.5184685595644257E-5 0.0 6.044324542954622E-4 1.2592342797822128E-4 19 2.5184685595644257E-4 2.5184685595644257E-5 0.0 7.303558822736835E-4 1.2592342797822128E-4 20 2.5184685595644257E-4 2.5184685595644257E-5 0.0 0.0011081261662083473 1.2592342797822128E-4 21 2.770315415520868E-4 2.5184685595644257E-5 0.0 0.0017125586205038097 1.5110811357386554E-4 22 3.022162271477311E-4 2.5184685595644257E-5 0.0 0.0028710541579034456 1.5110811357386554E-4 23 3.022162271477311E-4 2.5184685595644257E-5 0.0 0.0034251172410076193 2.0147748476515405E-4 24 3.022162271477311E-4 2.5184685595644257E-5 0.0 0.004382135293642101 2.0147748476515405E-4 25 3.2740091274337534E-4 2.5184685595644257E-5 0.0 0.004608797464002899 2.0147748476515405E-4 26 3.2740091274337534E-4 2.5184685595644257E-5 0.0 0.005515446145446093 2.0147748476515405E-4 27 3.2740091274337534E-4 2.5184685595644257E-5 0.0 0.00982202738230126 2.0147748476515405E-4 28 3.2740091274337534E-4 5.036937119128851E-5 0.0 0.034326726466863126 2.0147748476515405E-4 29 3.2740091274337534E-4 7.555405678693277E-5 0.0 0.08676124187699447 2.0147748476515405E-4 30 3.2740091274337534E-4 7.555405678693277E-5 0.0 0.15584283446584668 2.0147748476515405E-4 31 3.525855983390196E-4 7.555405678693277E-5 0.0 0.4721876702327342 2.2666217036079834E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5030 0.0 21.515903 1 CTTATAC 2430 0.0 20.25103 37 TACTTAC 810 0.0 15.759259 31 ACCGTGA 975 0.0 15.558974 8 GTATCAA 6900 0.0 15.523912 2 AACGCAG 11360 0.0 15.454666 5 TAGGACG 145 5.3560143E-8 15.310345 4 TTAGCGC 110 1.453575E-5 15.136364 4 ATCAACG 11580 0.0 15.113127 2 TAGATCG 135 3.9789848E-7 15.074075 5 CAACGCA 11625 0.0 15.022796 4 TCAACGC 11625 0.0 15.022796 3 GACCGTG 1100 0.0 14.968183 7 TCGTTAC 695 0.0 14.906476 23 CAGACCG 910 0.0 14.84066 5 CTAATCG 765 0.0 14.751634 19 TATCAAC 11915 0.0 14.672682 1 TAATCGA 760 0.0 14.605264 20 CGCAGAG 12045 0.0 14.591117 7 GTACTTA 995 0.0 14.502513 30 >>END_MODULE