##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727338.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7224626 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13128485820581 33.0 31.0 34.0 30.0 34.0 2 32.27418858775527 34.0 31.0 34.0 30.0 34.0 3 32.35862673029718 34.0 31.0 34.0 30.0 34.0 4 35.930003850718364 37.0 35.0 37.0 35.0 37.0 5 35.8125400539765 37.0 35.0 37.0 35.0 37.0 6 35.83348743588942 37.0 35.0 37.0 35.0 37.0 7 35.77790241321834 37.0 35.0 37.0 35.0 37.0 8 35.75366143520786 37.0 35.0 37.0 35.0 37.0 9 37.4777549730602 39.0 37.0 39.0 35.0 39.0 10 37.32413691726049 39.0 37.0 39.0 34.0 39.0 11 37.4288183222218 39.0 37.0 39.0 35.0 39.0 12 37.33831481380489 39.0 37.0 39.0 34.0 39.0 13 37.39456146242034 39.0 37.0 39.0 34.0 39.0 14 38.558716395838346 40.0 38.0 41.0 34.0 41.0 15 38.52127985587074 40.0 38.0 41.0 34.0 41.0 16 38.4532450537924 40.0 38.0 41.0 34.0 41.0 17 38.42594384816598 40.0 38.0 41.0 34.0 41.0 18 38.38667690202925 40.0 38.0 41.0 34.0 41.0 19 38.39844415475625 40.0 38.0 41.0 34.0 41.0 20 38.28768326554205 40.0 38.0 41.0 34.0 41.0 21 38.21327553841542 40.0 38.0 41.0 34.0 41.0 22 38.141612866880585 40.0 38.0 41.0 33.0 41.0 23 38.0282654077872 40.0 38.0 41.0 33.0 41.0 24 37.920314214189084 40.0 37.0 41.0 33.0 41.0 25 37.83851399366556 40.0 37.0 41.0 33.0 41.0 26 37.48270830905295 39.0 37.0 41.0 32.0 41.0 27 37.26886955809201 39.0 37.0 41.0 31.0 41.0 28 37.11158238502588 39.0 36.0 41.0 31.0 41.0 29 37.05759813725998 39.0 36.0 40.0 31.0 41.0 30 36.97442829566541 39.0 36.0 40.0 31.0 41.0 31 36.76039728561727 39.0 36.0 40.0 30.0 41.0 32 36.64413119793329 39.0 36.0 40.0 30.0 41.0 33 36.4587811189119 39.0 35.0 40.0 30.0 41.0 34 36.31723109265449 39.0 35.0 40.0 30.0 41.0 35 36.16244744018583 39.0 35.0 40.0 29.0 41.0 36 36.00165821732502 38.0 35.0 40.0 28.0 41.0 37 35.761654651742525 38.0 35.0 40.0 27.0 41.0 38 35.643547361482796 38.0 35.0 40.0 27.0 41.0 39 35.475113175408666 38.0 35.0 40.0 26.0 41.0 40 35.328499634444746 38.0 34.0 40.0 25.0 41.0 41 35.176707140272725 38.0 34.0 40.0 25.0 41.0 42 34.96732329119874 38.0 34.0 40.0 24.0 41.0 43 31.66242072600021 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 33.0 11 46.0 12 47.0 13 46.0 14 56.0 15 133.0 16 180.0 17 403.0 18 856.0 19 1628.0 20 3284.0 21 6308.0 22 10964.0 23 17547.0 24 26713.0 25 38107.0 26 52241.0 27 69467.0 28 90306.0 29 115551.0 30 145422.0 31 181681.0 32 227544.0 33 287419.0 34 370513.0 35 487495.0 36 688827.0 37 1094166.0 38 1934134.0 39 1373505.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.57502049241027 18.6665856474785 12.876209785807596 25.882184074303638 2 18.777207290730345 21.76143097234376 34.12076971181622 25.340592025109675 3 19.06026692592807 22.31787500141876 30.633987143417528 27.987870929235648 4 14.994437082279417 15.63099598512089 32.99416468063537 36.38040225196432 5 14.766854367271055 37.24023914871164 33.54983358308098 14.443072900936324 6 36.48759119157172 34.91351663048025 13.86826113905412 14.730631038893915 7 30.058843184408442 30.866455924500453 20.00023253798882 19.07446835310229 8 28.48831205933705 34.80433450811156 18.49265276846165 18.21470066408974 9 27.137972263200894 13.683158131645845 18.11019698459131 41.068672620561955 10 15.687732486083018 28.04096710334902 33.23174099254411 23.039559418023853 11 37.27120268924647 21.24505822169895 20.703438489411077 20.780300599643496 12 21.692486226968704 25.334543269091025 29.614501844109302 23.358468659830972 13 32.168613295691706 19.53334331770254 23.48244739589288 24.815595990712875 14 22.596353084574897 20.2986424487579 25.693122384466683 31.41188208220052 15 25.894779882031266 28.146522740415907 21.566583515880268 24.392113861672563 16 24.79967821171643 25.99344242871534 23.923785120503123 25.283094239065107 17 24.523553191542373 26.17844854529494 25.21783134517967 24.08016691798302 18 24.2848557143304 25.366641816476037 25.929134601569686 24.419367867623873 19 25.37608175149828 25.472543492216758 25.795425257999515 23.355949498285447 20 24.77501257504541 25.32335929915265 25.70535831197352 24.196269813828426 21 24.55929206577614 25.651985306921077 25.631776648369065 24.15694597893372 22 25.110628564025323 25.154409377039034 25.080094111446044 24.6548679474896 23 24.537685410981826 25.208958913582517 25.37547272343233 24.877882952003326 24 24.407976274481197 25.14437425549779 25.42917792561165 25.01847154440936 25 24.70168005928611 24.952475048535383 25.47601772050207 24.86982717167643 26 24.31458735718638 25.30377351021354 25.75421897271914 24.62742015988094 27 24.882741334983987 25.594141482202676 25.403792528499054 24.119324654314287 28 24.526224610104386 25.80648465401531 25.339913789308955 24.327376946571352 29 24.314019853761287 25.923431884224872 25.667833878182762 24.094714383831082 30 24.636237225290277 25.736045021569282 25.351734470407187 24.27598328273325 31 24.423990944306322 25.171559053714336 25.620952558651478 24.78349744332786 32 24.04251791026968 25.620897192463666 25.531771471630506 24.80481342563615 33 24.32463632027457 25.123667301255452 25.52922462699107 25.022471751478896 34 24.47747468173439 25.153426627205338 25.970022531270132 24.39907615979014 35 24.363046613070352 25.141979667874846 25.829046375549407 24.665927343505395 36 24.080900519971554 24.76423000996868 26.334968758244372 24.819900711815393 37 23.794698853615397 24.589189807195556 26.541664578900004 25.074446760289042 38 23.60513886808812 24.498638407026192 26.969423745948923 24.926798978936766 39 23.310424650355603 24.440490068274816 27.402262760729762 24.846822520639822 40 23.65271226496707 24.206429509292246 27.649043701362537 24.491814524378146 41 23.09960404870785 24.24578102728086 27.8988005745903 24.755814349420994 42 22.84046260664566 24.391075745651055 27.871615776373755 24.896845871329536 43 22.86143255028011 23.693627877761422 27.718472900880958 25.726466671077507 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1670.0 1 1628.5 2 1587.0 3 3452.5 4 5318.0 5 5318.0 6 5938.0 7 6558.0 8 6688.5 9 6819.0 10 10174.0 11 13529.0 12 13529.0 13 26907.0 14 40285.0 15 63054.5 16 85824.0 17 64647.0 18 43470.0 19 43470.0 20 51636.5 21 59803.0 22 51609.0 23 43415.0 24 53221.5 25 63028.0 26 63028.0 27 76432.0 28 89836.0 29 103272.0 30 116708.0 31 133264.0 32 149820.0 33 149820.0 34 169981.5 35 190143.0 36 217951.5 37 245760.0 38 278874.0 39 311988.0 40 311988.0 41 347597.5 42 383207.0 43 419786.5 44 456366.0 45 495453.0 46 534540.0 47 534540.0 48 571705.0 49 608870.0 50 628126.5 51 647383.0 52 642467.5 53 637552.0 54 637552.0 55 600348.0 56 563144.0 57 526966.5 58 490789.0 59 453215.5 60 415642.0 61 415642.0 62 367237.5 63 318833.0 64 272621.0 65 226409.0 66 190520.5 67 154632.0 68 154632.0 69 129155.5 70 103679.0 71 88512.5 72 73346.0 73 60503.5 74 47661.0 75 47661.0 76 39811.0 77 31961.0 78 26808.0 79 21655.0 80 17610.5 81 13566.0 82 13566.0 83 10884.5 84 8203.0 85 6656.5 86 5110.0 87 4273.0 88 3436.0 89 3436.0 90 2606.5 91 1777.0 92 1279.5 93 782.0 94 575.5 95 369.0 96 369.0 97 238.0 98 107.0 99 76.5 100 46.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7224626.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.0145427011539 #Duplication Level Percentage of deduplicated Percentage of total 1 81.46682050741535 44.81859875532442 2 9.64870965674117 10.616386988436464 3 3.196544646586217 5.275693258672871 4 1.557859671829612 3.428197497531032 5 0.921272279602837 2.5341686582799836 6 0.576139700675992 1.9017637298801633 7 0.42695623992600185 1.6442161605053198 8 0.3074766705965024 1.3532550739311933 9 0.22536338736656647 1.1158437327799193 >10 1.5037519383221714 15.552655693555609 >50 0.11989773454426127 4.490284617424244 >100 0.046514761934091285 4.334030977767425 >500 0.001988194602259323 0.7443077823029302 >1k 5.787866697974242E-4 0.6233632579230983 >5k 2.5164637421695652E-5 0.09085955154226731 >10k+ 1.0065854968678261E-4 1.4763742641429942 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 54169 0.7497827569205658 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19263 0.26662971896399895 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18912 0.2617713359833436 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14298 0.1979064383401992 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.152464086030197E-5 2 0.0 0.0 0.0 0.0 4.152464086030197E-5 3 0.0 0.0 0.0 0.0 4.152464086030197E-5 4 0.0 0.0 0.0 0.0 4.152464086030197E-5 5 1.384154695343399E-5 0.0 0.0 0.0 4.152464086030197E-5 6 2.768309390686798E-5 0.0 0.0 0.0 9.689082867403793E-5 7 2.768309390686798E-5 0.0 0.0 0.0 9.689082867403793E-5 8 4.152464086030197E-5 0.0 0.0 0.0 1.245739225809059E-4 9 4.152464086030197E-5 0.0 0.0 0.0 1.6609856344120788E-4 10 4.152464086030197E-5 0.0 0.0 0.0 1.9378165734807587E-4 11 5.536618781373596E-5 0.0 0.0 0.0 1.9378165734807587E-4 12 5.536618781373596E-5 0.0 0.0 5.536618781373596E-5 2.491478451618118E-4 13 5.536618781373596E-5 0.0 0.0 5.536618781373596E-5 2.768309390686798E-4 14 6.920773476716995E-5 0.0 0.0 6.920773476716995E-5 3.3219712688241577E-4 15 8.304928172060394E-5 1.384154695343399E-5 0.0 9.689082867403793E-5 4.290879555564537E-4 16 8.304928172060394E-5 1.384154695343399E-5 0.0 2.2146475125494385E-4 4.982956903236236E-4 17 8.304928172060394E-5 1.384154695343399E-5 0.0 5.675034250907936E-4 4.982956903236236E-4 18 8.304928172060394E-5 1.384154695343399E-5 0.0 8.028097232991715E-4 5.121372372770577E-4 19 8.304928172060394E-5 1.384154695343399E-5 0.0 0.0011626899440884552 5.121372372770577E-4 20 8.304928172060394E-5 1.384154695343399E-5 0.0 0.0017025102752723808 5.536618781373596E-4 21 9.689082867403793E-5 1.384154695343399E-5 0.0 0.00253300309247842 5.675034250907936E-4 22 9.689082867403793E-5 1.384154695343399E-5 0.0 0.004083256351263028 5.951865189976616E-4 23 9.689082867403793E-5 1.384154695343399E-5 0.0 0.0049967984501896705 7.197604415785675E-4 24 9.689082867403793E-5 1.384154695343399E-5 0.0 0.00679619955413609 7.197604415785675E-4 25 9.689082867403793E-5 1.384154695343399E-5 0.0 0.007778949387829903 7.197604415785675E-4 26 9.689082867403793E-5 1.384154695343399E-5 0.0 0.009232311817940472 7.751266293923035E-4 27 9.689082867403793E-5 1.384154695343399E-5 0.0 0.014782772146267503 7.751266293923035E-4 28 9.689082867403793E-5 1.384154695343399E-5 0.0 0.043517823621596466 7.751266293923035E-4 29 9.689082867403793E-5 1.384154695343399E-5 0.0 0.10173537010773984 7.751266293923035E-4 30 9.689082867403793E-5 1.384154695343399E-5 0.0 0.18672246840182455 7.751266293923035E-4 31 9.689082867403793E-5 1.384154695343399E-5 0.0 0.48992155441679613 7.889681763457375E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4225 0.0 19.528994 37 AACGCAG 22570 0.0 15.057377 5 TCTTATA 7070 0.0 14.574965 37 TATACCG 315 0.0 13.507937 5 TAAGACT 1100 0.0 13.454546 4 GAGTACT 15985 0.0 13.36722 11 ACGCAGA 26025 0.0 13.093948 6 AGTACTT 16330 0.0 13.028169 12 CGCAGAG 26590 0.0 12.857466 7 CTCTTAT 11095 0.0 12.722398 37 GTACTTT 16820 0.0 12.681628 13 CGTTACG 540 0.0 12.675926 24 AGAGTAC 27105 0.0 12.544917 10 CAGAGTA 27665 0.0 12.384602 9 TACTTTT 17475 0.0 12.24864 14 GCAGAGT 28460 0.0 12.110155 8 ATACCGT 415 0.0 12.036144 6 CTCGTTA 910 0.0 11.994506 22 ACTTTTT 18255 0.0 11.796221 15 TACTTAC 1285 0.0 11.661479 31 >>END_MODULE