##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727337.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5255284 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1301813565166 33.0 31.0 34.0 30.0 34.0 2 32.27492500881018 34.0 31.0 34.0 30.0 34.0 3 32.35577563458036 34.0 31.0 34.0 30.0 34.0 4 35.92685304923578 37.0 35.0 37.0 35.0 37.0 5 35.80871024287175 37.0 35.0 37.0 35.0 37.0 6 35.82959417607117 37.0 35.0 37.0 35.0 37.0 7 35.769435486264875 37.0 35.0 37.0 35.0 37.0 8 35.746437490343055 37.0 35.0 37.0 35.0 37.0 9 37.46849627917349 39.0 37.0 39.0 35.0 39.0 10 37.313209333691574 39.0 37.0 39.0 34.0 39.0 11 37.418718379444385 39.0 37.0 39.0 35.0 39.0 12 37.32636162003804 39.0 37.0 39.0 34.0 39.0 13 37.38345596546257 39.0 37.0 39.0 34.0 39.0 14 38.544910988635436 40.0 38.0 41.0 34.0 41.0 15 38.50608435243462 40.0 38.0 41.0 34.0 41.0 16 38.441611718795784 40.0 38.0 41.0 34.0 41.0 17 38.409383774502004 40.0 38.0 41.0 34.0 41.0 18 38.37140885249969 40.0 38.0 41.0 34.0 41.0 19 38.38008259877107 40.0 38.0 41.0 34.0 41.0 20 38.268055732097444 40.0 38.0 41.0 34.0 41.0 21 38.19467758545495 40.0 38.0 41.0 34.0 41.0 22 38.121588671516136 40.0 38.0 41.0 33.0 41.0 23 38.009586922419416 40.0 37.0 41.0 33.0 41.0 24 37.902053438025426 40.0 37.0 41.0 33.0 41.0 25 37.81724964816364 40.0 37.0 41.0 33.0 41.0 26 37.461884077054634 39.0 37.0 41.0 32.0 41.0 27 37.24613569885091 39.0 37.0 41.0 31.0 41.0 28 37.09777397377573 39.0 36.0 41.0 31.0 41.0 29 37.045094232776 39.0 36.0 40.0 31.0 41.0 30 36.95766908125232 39.0 36.0 40.0 31.0 41.0 31 36.74383439600981 39.0 36.0 40.0 30.0 41.0 32 36.62936065871987 39.0 36.0 40.0 30.0 41.0 33 36.44458986422047 39.0 35.0 40.0 30.0 41.0 34 36.304590960260185 39.0 35.0 40.0 30.0 41.0 35 36.15119430272465 39.0 35.0 40.0 29.0 41.0 36 35.99614502279991 38.0 35.0 40.0 28.0 41.0 37 35.75349191404308 38.0 35.0 40.0 27.0 41.0 38 35.630922325035144 38.0 35.0 40.0 27.0 41.0 39 35.460284734374014 38.0 35.0 40.0 26.0 41.0 40 35.314672051976636 38.0 34.0 40.0 25.0 41.0 41 35.160847824779786 38.0 34.0 40.0 25.0 41.0 42 34.94803002083236 38.0 34.0 40.0 24.0 41.0 43 31.60656512569064 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 22.0 11 25.0 12 20.0 13 21.0 14 26.0 15 80.0 16 132.0 17 279.0 18 530.0 19 1146.0 20 2341.0 21 4589.0 22 7677.0 23 12822.0 24 19558.0 25 27823.0 26 38527.0 27 50923.0 28 66604.0 29 84911.0 30 106730.0 31 133554.0 32 166762.0 33 210469.0 34 271281.0 35 356506.0 36 502006.0 37 794979.0 38 1400590.0 39 994346.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.64886540860589 18.471085482725577 12.86297752890234 26.017071579766192 2 18.76444736383419 21.56313531295359 33.97955277012622 25.692864553085997 3 19.143932088161172 22.100099633055038 30.4364140929396 28.319554185844193 4 15.06082259303208 15.499276537671419 32.66660755156144 36.77329331773506 5 14.92459779528566 36.942989189547134 33.49221469286912 14.64019832229809 6 36.82164465326707 34.60492334952783 13.776572303228521 14.796859693976577 7 30.251666703455037 30.489389346037242 19.905013696690798 19.35393025381692 8 28.65749976594985 34.51767782673591 18.481646282103878 18.34317612521036 9 26.926670375949236 13.62466804838711 17.987705326676924 41.46095624898673 10 15.81202842700794 27.864488389209797 33.15145289959591 23.172030284186356 11 37.4924932696311 21.024839000137767 20.542067755044258 20.94059997518688 12 21.80510130375447 25.10615981933612 29.531172815779318 23.557566061130093 13 32.39255956481134 19.271917559545784 23.36081170874876 24.97471116689412 14 22.752338408352433 19.985180629629152 25.55648752760079 31.70599343441763 15 25.968568016495396 27.881385668215074 21.488600806350334 24.66144550893919 16 25.08794957608381 25.67815554782577 23.760028953715917 25.47386592237451 17 24.54908240924753 26.044187145737506 25.214603054754036 24.192127390260925 18 24.48706863415945 25.04009298070285 25.827471931107816 24.645366454029887 19 25.43050004528775 25.281868686830244 25.682760436924056 23.604870830957946 20 24.970962558826507 25.159553698715424 25.57212892776109 24.297354814696977 21 24.715695669349174 25.379028041110622 25.411909232688473 24.493367056851735 22 25.20731515175964 24.96805120332222 25.009209778196574 24.81542386672157 23 24.760431596085006 24.921412429851557 25.21932211465641 25.098833859407026 24 24.736018072477147 24.85686786860615 25.240462741880364 25.166651317036337 25 24.998915377361147 24.73835857396099 25.284114045977347 24.97861200270052 26 24.664356864443484 24.977698636267803 25.614257954470204 24.74368654481851 27 24.937700797901694 25.30700529219734 25.37583125859611 24.37946265130486 28 24.792513592034226 25.375526803118536 25.355356627729346 24.476602977117885 29 24.52135793232107 25.54027527342005 25.58160510450054 24.356761689758347 30 24.6591240359227 25.511161718377164 25.367477761430212 24.46223648426993 31 24.62072458881385 24.913173103489743 25.430176561342833 25.035925746353577 32 24.22841467749412 25.387019997396905 25.41584812542957 24.968717199679407 33 24.50897040007733 25.00041862628166 25.382015510484308 25.108595463156703 34 24.64782112631782 24.870149738815257 25.756286434757854 24.72574270010907 35 24.487239890365583 24.976366643553423 25.753070623775994 24.783322842305004 36 24.22481829716529 24.594484332340556 26.12859742689453 25.05209994359962 37 24.02117563960387 24.28131381672237 26.416802593351758 25.280707950322 38 23.73150528116083 24.32576431644798 26.837712291095972 25.105018111295223 39 23.566699725457273 24.11968601506598 27.283853736544017 25.029760522932726 40 23.74318876011268 24.030727930212713 27.53333597194747 24.692747337727134 41 23.379745033760308 23.928240605074816 27.705315259841335 24.986699101323545 42 23.00688221607053 24.06986948754815 27.76074518522691 25.16250311115441 43 23.16540837754915 23.398126533218758 27.641398638018423 25.79506645121367 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 827.0 1 881.5 2 936.0 3 2324.0 4 3712.0 5 3712.0 6 4102.5 7 4493.0 8 4515.5 9 4538.0 10 6771.0 11 9004.0 12 9004.0 13 18343.5 14 27683.0 15 45817.0 16 63951.0 17 46561.0 18 29171.0 19 29171.0 20 34281.0 21 39391.0 22 32958.5 23 26526.0 24 32915.0 25 39304.0 26 39304.0 27 48326.0 28 57348.0 29 66566.5 30 75785.0 31 87938.0 32 100091.0 33 100091.0 34 114850.5 35 129610.0 36 150384.5 37 171159.0 38 196550.5 39 221942.0 40 221942.0 41 249475.5 42 277009.0 43 304375.5 44 331742.0 45 359853.0 46 387964.0 47 387964.0 48 417015.0 49 446066.0 50 460558.5 51 475051.0 52 473205.5 53 471360.0 54 471360.0 55 447693.0 56 424026.0 57 397231.0 58 370436.0 59 342281.5 60 314127.0 61 314127.0 62 277645.5 63 241164.0 64 205193.5 65 169223.0 66 142921.5 67 116620.0 68 116620.0 69 96997.0 70 77374.0 71 65323.0 72 53272.0 73 43880.5 74 34489.0 75 34489.0 76 28480.0 77 22471.0 78 18836.0 79 15201.0 80 12182.0 81 9163.0 82 9163.0 83 7382.0 84 5601.0 85 4508.5 86 3416.0 87 2756.0 88 2096.0 89 2096.0 90 1594.5 91 1093.0 92 798.5 93 504.0 94 362.5 95 221.0 96 221.0 97 158.5 98 96.0 99 62.0 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5255284.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.08610158017042 #Duplication Level Percentage of deduplicated Percentage of total 1 81.18363671955265 46.34457332420037 2 9.811274409157033 11.201748151041297 3 3.3513456197460245 5.7394576943724225 4 1.5518182155408355 3.543490091452918 5 0.9410067714628527 2.6859204071678318 6 0.6191592617537285 2.1207233106466004 7 0.42887396873691147 1.7137920061084315 8 0.3181422539482027 1.4529200820665182 9 0.23852614738489528 1.2254875091226751 >10 1.4342874899084739 15.070387581986164 >50 0.09117608746780635 3.5110346382459063 >100 0.028855810258751672 2.7803262978497134 >500 0.0011649770608986065 0.4208750558715858 >1k 5.991283808233482E-4 0.6710033466537257 >5k 0.0 0.0 >10k+ 1.3313964018061056E-4 1.5182605032138474 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 42146 0.8019737848611036 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13896 0.264419582271862 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13733 0.2613179420940904 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10129 0.19273934577084703 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.9028467348291737E-5 7 0.0 0.0 0.0 0.0 1.9028467348291737E-5 8 0.0 0.0 0.0 0.0 1.9028467348291737E-5 9 0.0 0.0 0.0 1.9028467348291737E-5 7.611386939316695E-5 10 1.9028467348291737E-5 0.0 0.0 3.8056934696583475E-5 9.51423367414587E-5 11 1.9028467348291737E-5 0.0 0.0 3.8056934696583475E-5 1.1417080408975043E-4 12 1.9028467348291737E-5 0.0 0.0 7.611386939316695E-5 1.7125620613462565E-4 13 1.9028467348291737E-5 0.0 0.0 7.611386939316695E-5 1.902846734829174E-4 14 3.8056934696583475E-5 0.0 0.0 1.1417080408975043E-4 3.2348394492095957E-4 15 5.7085402044875215E-5 0.0 0.0 2.0931314083120911E-4 3.425124122692513E-4 16 5.7085402044875215E-5 0.0 0.0 3.805693469658348E-4 3.995978143141265E-4 17 7.611386939316695E-5 0.0 0.0 7.611386939316696E-4 3.995978143141265E-4 18 7.611386939316695E-5 0.0 0.0 8.372525633248365E-4 4.3765474901071E-4 19 7.611386939316695E-5 0.0 0.0 0.0010275372368077538 4.3765474901071E-4 20 9.51423367414587E-5 1.9028467348291737E-5 0.0 0.0015222773878633392 4.947401510555852E-4 21 9.51423367414587E-5 1.9028467348291737E-5 0.0 0.0023595299511881755 5.137686184038769E-4 22 9.51423367414587E-5 1.9028467348291737E-5 0.0 0.0034631810573890966 5.327970857521687E-4 23 9.51423367414587E-5 1.9028467348291737E-5 0.0 0.004129177414579307 5.898824877970439E-4 24 1.1417080408975043E-4 1.9028467348291737E-5 0.0 0.0055753409330494795 5.898824877970439E-4 25 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.006469678898419191 6.089109551453356E-4 26 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.007934870884237655 6.279394224936273E-4 27 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.013300898676455924 6.279394224936273E-4 28 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.04003589530080582 6.279394224936273E-4 29 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.09940471342747605 6.279394224936273E-4 30 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.1846903040825196 6.279394224936273E-4 31 1.1417080408975043E-4 1.9028467348291737E-5 1.9028467348291737E-5 0.4567593302283949 6.279394224936273E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3010 0.0 19.053154 37 TATACTG 650 0.0 15.36923 5 TCTTATA 5080 0.0 15.258859 37 CGTATAC 135 3.9797123E-7 15.074073 3 AACGCAG 17485 0.0 14.802115 5 CTATACT 615 0.0 14.739839 4 GAGTACT 11935 0.0 14.121073 11 AGTACTT 12195 0.0 13.820007 12 TATACTA 445 0.0 13.719102 5 CTCTTAT 8175 0.0 13.487461 37 GTATAAG 655 0.0 13.274809 1 CTATACG 140 9.573541E-6 13.214286 4 GTACTTT 12725 0.0 13.1426325 13 TAGTACT 395 0.0 13.113924 4 ACGCAGA 20050 0.0 12.973066 6 TAGATCG 230 5.7661964E-10 12.869565 5 CGCAGAG 20395 0.0 12.79897 7 GTATTAC 465 0.0 12.731182 1 TACTTTT 13145 0.0 12.722708 14 TATACCG 220 4.094545E-9 12.613636 5 >>END_MODULE