##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727334.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4973386 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.336047915846464 33.0 31.0 34.0 30.0 34.0 2 32.47944056624601 34.0 31.0 34.0 31.0 34.0 3 32.573557129890986 34.0 31.0 34.0 31.0 34.0 4 36.107302952153724 37.0 35.0 37.0 35.0 37.0 5 35.915195603156484 37.0 35.0 37.0 35.0 37.0 6 35.93243898623594 37.0 35.0 37.0 35.0 37.0 7 35.89872312344146 37.0 35.0 37.0 35.0 37.0 8 35.85449108514803 37.0 35.0 37.0 35.0 37.0 9 37.69134509165386 39.0 37.0 39.0 35.0 39.0 10 37.51879584653192 39.0 37.0 39.0 35.0 39.0 11 37.62625704097772 39.0 37.0 39.0 35.0 39.0 12 37.54853574606918 39.0 37.0 39.0 35.0 39.0 13 37.62801881856747 39.0 37.0 39.0 35.0 39.0 14 38.863067535879985 40.0 38.0 41.0 36.0 41.0 15 38.790752819105535 40.0 38.0 41.0 35.0 41.0 16 38.762734684176934 40.0 38.0 41.0 35.0 41.0 17 38.70411325402854 40.0 38.0 41.0 35.0 41.0 18 38.673134761709626 40.0 38.0 41.0 35.0 41.0 19 38.730637235879136 40.0 38.0 41.0 35.0 41.0 20 38.693689972988224 40.0 38.0 41.0 34.0 41.0 21 38.65434072481002 40.0 38.0 41.0 34.0 41.0 22 38.61893587185873 40.0 38.0 41.0 34.0 41.0 23 38.5519764603029 40.0 38.0 41.0 34.0 41.0 24 38.51507986711669 40.0 38.0 41.0 34.0 41.0 25 38.40030695385397 40.0 38.0 41.0 34.0 41.0 26 38.29593801888693 40.0 38.0 41.0 34.0 41.0 27 38.20952204393546 40.0 38.0 41.0 34.0 41.0 28 38.12399017490297 40.0 38.0 41.0 34.0 41.0 29 38.03989796890891 40.0 38.0 41.0 33.0 41.0 30 37.978361020037454 40.0 37.0 41.0 33.0 41.0 31 37.884141508421024 40.0 37.0 41.0 33.0 41.0 32 37.794293063116356 40.0 37.0 41.0 33.0 41.0 33 37.69882912768082 40.0 37.0 41.0 33.0 41.0 34 37.60847117034552 40.0 37.0 41.0 33.0 41.0 35 37.54695010602435 40.0 37.0 41.0 33.0 41.0 36 37.46064632827615 40.0 37.0 41.0 32.0 41.0 37 37.37852863220349 40.0 37.0 41.0 32.0 41.0 38 37.28679857143604 40.0 36.0 41.0 32.0 41.0 39 37.1808805912109 39.0 36.0 41.0 31.0 41.0 40 37.06787126517025 39.0 36.0 41.0 31.0 41.0 41 36.95857610891252 39.0 36.0 41.0 31.0 41.0 42 36.84687394061108 39.0 36.0 41.0 31.0 41.0 43 35.178408432404 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 9.0 10 12.0 11 18.0 12 26.0 13 16.0 14 10.0 15 19.0 16 29.0 17 48.0 18 95.0 19 214.0 20 485.0 21 1019.0 22 1990.0 23 3586.0 24 6259.0 25 10064.0 26 15922.0 27 24222.0 28 34888.0 29 49188.0 30 66574.0 31 87044.0 32 113542.0 33 148818.0 34 200672.0 35 279189.0 36 413622.0 37 696255.0 38 1368464.0 39 1451087.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.97834795047076 17.632132313880323 12.349534100108055 26.03998563554086 2 16.399833031258783 20.539105551027006 37.66369632278693 25.397365094927277 3 18.15465359012954 22.598145408379725 31.15798773712718 28.089213264363554 4 13.026175728165882 15.088211532344362 36.101862996357006 35.783749743132745 5 13.844752850472494 37.59291959240646 35.21132282915503 13.351004727966018 6 34.58997552170694 36.84079618995992 14.971088107780092 13.598140180553047 7 29.229744081798597 31.29714846183264 21.4293843268952 18.043723129473562 8 27.256400367878143 36.82814887080955 19.142371012424935 16.77307974888738 9 26.68059547358681 13.614366550273798 18.58824149181262 41.11679648432677 10 14.61638006782502 27.921259278889675 34.93841016965102 22.523950483634287 11 36.84940199694936 21.252161002584558 21.99893593620121 19.899501064264868 12 20.744136891847926 25.238620127213128 31.85332889906394 22.163914081875006 13 31.473607719167585 19.25635774098371 24.975600124341845 24.29443441550686 14 21.411086933529795 19.46283678765332 27.66612123008349 31.459955048733395 15 24.907899768889845 28.33514229541001 22.701736804663863 24.05522113103628 16 23.96914295411617 26.557842081833183 24.944816268031477 24.52819869601917 17 23.505495049047067 26.88854233313079 26.36477442128964 23.2411881965325 18 23.485126632037005 26.159702866417366 26.995270425420426 23.359900076125196 19 24.560691649512023 26.07925465668661 26.857416657383926 22.502637036417443 20 23.735117282270068 25.880717885159125 26.880680486091368 23.503484346479443 21 23.469181760675724 26.243549163487412 27.005967363080202 23.28130171275666 22 23.986515424300467 25.569541555793172 26.487487598991915 23.956455420914445 23 23.425469086855514 25.650070193626632 26.896645464478325 24.027815255039524 24 23.336093357724497 25.62141768203795 26.991510411618965 24.050978548618588 25 23.78602827128238 25.50720977619674 26.811532424790673 23.8952295277302 26 23.448009062638615 25.77405011394652 27.174243060964905 23.60369776244997 27 23.90144259866417 26.184756220409998 26.64209051941675 23.271710661509083 28 23.671357903850616 26.31933254326127 26.530536740964806 23.478772811923303 29 23.383385082115083 26.454311006626067 26.835841818833284 23.32646209242556 30 23.671458438979 26.27051268491929 26.58983235968413 23.46819651641759 31 23.51653380614334 25.64546568474677 26.920190791545235 23.91780971756465 32 22.986271325008754 26.252255505605238 26.94972801226368 23.81174515712233 33 23.415777500479553 25.711316193836552 26.836163531244107 24.036742774439787 34 23.62294018602216 25.663280509495944 27.406579742654202 23.307199561827694 35 23.432225047482742 25.789090169152363 26.989238317717547 23.789446465647348 36 23.248326190647578 25.418859505375213 27.378691298041215 23.954123005935994 37 22.979615899509913 25.192092469798244 27.418442887803202 24.40984874288865 38 23.021780332353046 25.12316558577999 27.72722648111367 24.12782760075329 39 22.6614624322343 24.9803855964528 28.2993920037576 24.058759967555304 40 23.04299324444151 24.836660576918824 28.381891130107334 23.738455048532327 41 22.542851087769982 24.678136786487116 28.630876429056585 24.14813569668632 42 22.08205838034691 24.8957350183557 28.616198300312906 24.40600830098448 43 21.819360089886448 24.392938734294905 28.576104891114422 25.211596284704225 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 402.0 1 606.0 2 810.0 3 3629.0 4 6448.0 5 6448.0 6 8199.5 7 9951.0 8 9176.0 9 8401.0 10 10895.0 11 13389.0 12 13389.0 13 20736.0 14 28083.0 15 45663.0 16 63243.0 17 50608.0 18 37973.0 19 37973.0 20 42049.5 21 46126.0 22 41027.5 23 35929.0 24 43649.0 25 51369.0 26 51369.0 27 62999.5 28 74630.0 29 85486.5 30 96343.0 31 110001.5 32 123660.0 33 123660.0 34 140989.0 35 158318.0 36 178812.5 37 199307.0 38 223010.5 39 246714.0 40 246714.0 41 269600.5 42 292487.0 43 315969.5 44 339452.0 45 363222.0 46 386992.0 47 386992.0 48 407084.5 49 427177.0 50 434121.0 51 441065.0 52 432232.0 53 423399.0 54 423399.0 55 395872.0 56 368345.0 57 338385.0 58 308425.0 59 282111.0 60 255797.0 61 255797.0 62 222275.5 63 188754.0 64 158452.5 65 128151.0 66 105706.0 67 83261.0 68 83261.0 69 67572.5 70 51884.0 71 42157.5 72 32431.0 73 26009.5 74 19588.0 75 19588.0 76 15457.5 77 11327.0 78 8966.0 79 6605.0 80 5077.0 81 3549.0 82 3549.0 83 2766.0 84 1983.0 85 1458.0 86 933.0 87 694.5 88 456.0 89 456.0 90 298.5 91 141.0 92 98.0 93 55.0 94 40.5 95 26.0 96 26.0 97 16.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4973386.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.03473519591279 #Duplication Level Percentage of deduplicated Percentage of total 1 79.45879386838774 42.14076091796562 2 10.71789332391654 11.368412685839104 3 3.6244821938515406 5.766703601196524 4 1.6775611954816902 3.5587605510924125 5 0.9948577797387957 2.638100945302038 6 0.657827819788147 2.0932634536181403 7 0.44837539977190743 1.6645629416685248 8 0.3481961619100668 1.4773192994506852 9 0.25910897412984946 1.2367598246875062 >10 1.6350300032290623 16.400334437424466 >50 0.12588173438092348 4.520642830694579 >100 0.049754527118256064 4.527625509574813 >500 0.0015166232742134542 0.5380008534221066 >1k 5.687329115203621E-4 0.6081584366862246 >5k 3.791552743427869E-5 0.1761897970577793 >10k+ 1.1374658230283607E-4 1.2844039143196297 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36487 0.7336450458500506 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14167 0.2848562327557121 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13220 0.26581487944028476 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8762 0.17617775897547466 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.010702567626965E-5 2.010702567626965E-5 2 0.0 0.0 0.0 2.010702567626965E-5 2.010702567626965E-5 3 0.0 0.0 0.0 4.02140513525393E-5 2.010702567626965E-5 4 0.0 0.0 0.0 4.02140513525393E-5 2.010702567626965E-5 5 0.0 4.02140513525393E-5 0.0 6.0321077028808944E-5 2.010702567626965E-5 6 0.0 4.02140513525393E-5 0.0 6.0321077028808944E-5 4.02140513525393E-5 7 0.0 4.02140513525393E-5 0.0 6.0321077028808944E-5 6.0321077028808944E-5 8 0.0 4.02140513525393E-5 0.0 6.0321077028808944E-5 6.0321077028808944E-5 9 0.0 4.02140513525393E-5 0.0 8.04281027050786E-5 8.04281027050786E-5 10 0.0 4.02140513525393E-5 0.0 8.04281027050786E-5 8.04281027050786E-5 11 0.0 4.02140513525393E-5 0.0 1.2064215405761789E-4 8.04281027050786E-5 12 0.0 4.02140513525393E-5 0.0 1.608562054101572E-4 1.0053512838134823E-4 13 0.0 4.02140513525393E-5 0.0 1.8096323108642684E-4 1.0053512838134823E-4 14 2.010702567626965E-5 4.02140513525393E-5 0.0 2.4128430811523577E-4 1.8096323108642684E-4 15 2.010702567626965E-5 4.02140513525393E-5 0.0 3.619264621728537E-4 2.4128430811523577E-4 16 2.010702567626965E-5 4.02140513525393E-5 0.0 4.222475392016626E-4 3.0160538514404473E-4 17 2.010702567626965E-5 4.02140513525393E-5 0.0 4.8256861623047155E-4 3.0160538514404473E-4 18 2.010702567626965E-5 4.02140513525393E-5 0.0 5.831037446118198E-4 3.217124108203144E-4 19 6.0321077028808944E-5 4.02140513525393E-5 0.0 7.238529243457074E-4 3.217124108203144E-4 20 6.0321077028808944E-5 4.02140513525393E-5 0.0 0.0010053512838134825 3.4181943649658404E-4 21 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.0017090971824829202 3.4181943649658404E-4 22 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.0029356257487353687 3.4181943649658404E-4 23 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.003619264621728537 3.820334878491233E-4 24 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.004906114265009794 3.820334878491233E-4 25 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.006012000677204625 3.820334878491233E-4 26 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.00796238216780278 3.820334878491233E-4 27 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.02002659757356457 3.820334878491233E-4 28 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.10373214546387512 3.820334878491233E-4 29 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.25192092469798244 4.0214051352539294E-4 30 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.431898911526272 4.0214051352539294E-4 31 6.0321077028808944E-5 4.02140513525393E-5 2.010702567626965E-5 0.9202583511515092 4.0214051352539294E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 5265 0.0 17.28775 37 AACGCAG 15765 0.0 15.572153 5 CGCGAAC 135 3.979585E-7 15.074075 14 TACGGAT 955 0.0 14.335079 27 TATACTG 865 0.0 14.329479 5 TTAGACT 570 0.0 14.280702 4 ACGCAGA 17485 0.0 14.146125 6 TCGTTAC 695 0.0 14.107915 23 CGCAGAG 17860 0.0 13.828387 7 GTCTTAT 555 0.0 13.666667 1 AGAGTAC 18040 0.0 13.6288805 10 GTTACGG 845 0.0 13.573965 25 CTCGTTA 775 0.0 13.367743 22 CAGAGTA 18600 0.0 13.337904 9 GTCTTAG 960 0.0 13.296874 1 CAATACT 755 0.0 13.231787 4 GCAGAGT 18890 0.0 13.1919 8 TTACGGA 1015 0.0 13.123153 26 TAGACAG 945 0.0 13.116403 5 GTACTAC 555 0.0 13.0 1 >>END_MODULE