##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727333.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4431272 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33501983177742 33.0 31.0 34.0 30.0 34.0 2 32.482732046238645 34.0 31.0 34.0 31.0 34.0 3 32.57870471503442 34.0 31.0 34.0 31.0 34.0 4 36.11568867810416 37.0 35.0 37.0 35.0 37.0 5 35.91787279137909 37.0 35.0 37.0 35.0 37.0 6 35.92940198660791 37.0 35.0 37.0 35.0 37.0 7 35.8959738874075 37.0 35.0 37.0 35.0 37.0 8 35.849789857178706 37.0 35.0 37.0 35.0 37.0 9 37.693678022924345 39.0 37.0 39.0 35.0 39.0 10 37.50988068437234 39.0 37.0 39.0 35.0 39.0 11 37.62337698972214 39.0 37.0 39.0 35.0 39.0 12 37.5459723528594 39.0 37.0 39.0 35.0 39.0 13 37.62542448308296 39.0 37.0 39.0 35.0 39.0 14 38.8717970821922 40.0 38.0 41.0 36.0 41.0 15 38.795002879534366 40.0 38.0 41.0 35.0 41.0 16 38.766471568434525 40.0 38.0 41.0 35.0 41.0 17 38.699203073067956 40.0 38.0 41.0 35.0 41.0 18 38.658819634633126 40.0 38.0 41.0 35.0 41.0 19 38.71608987216312 40.0 38.0 41.0 34.0 41.0 20 38.67696950221065 40.0 38.0 41.0 34.0 41.0 21 38.6399304759446 40.0 38.0 41.0 34.0 41.0 22 38.610162499616365 40.0 38.0 41.0 34.0 41.0 23 38.548911012458724 40.0 38.0 41.0 34.0 41.0 24 38.507577959556535 40.0 38.0 41.0 34.0 41.0 25 38.393964532080176 40.0 38.0 41.0 34.0 41.0 26 38.29669494447644 40.0 38.0 41.0 34.0 41.0 27 38.21752264361113 40.0 38.0 41.0 34.0 41.0 28 38.135651117782885 40.0 38.0 41.0 34.0 41.0 29 38.064166225860205 40.0 38.0 41.0 33.0 41.0 30 38.01791539765557 40.0 38.0 41.0 33.0 41.0 31 37.93440912676992 40.0 37.0 41.0 33.0 41.0 32 37.85187909927443 40.0 37.0 41.0 33.0 41.0 33 37.76934794343475 40.0 37.0 41.0 33.0 41.0 34 37.69586294860708 40.0 37.0 41.0 33.0 41.0 35 37.6432071874622 40.0 37.0 41.0 33.0 41.0 36 37.56287562577968 40.0 37.0 41.0 33.0 41.0 37 37.501034465950184 40.0 37.0 41.0 32.0 41.0 38 37.42456567775573 40.0 37.0 41.0 32.0 41.0 39 37.32682489361971 40.0 37.0 41.0 32.0 41.0 40 37.234058301995454 39.0 36.0 41.0 31.0 41.0 41 37.141975712617054 39.0 36.0 41.0 31.0 41.0 42 37.05304097785015 39.0 36.0 41.0 31.0 41.0 43 35.369490746675 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 6.0 11 6.0 12 6.0 13 9.0 14 5.0 15 4.0 16 24.0 17 28.0 18 73.0 19 165.0 20 368.0 21 808.0 22 1644.0 23 3054.0 24 5207.0 25 8597.0 26 13489.0 27 20067.0 28 29334.0 29 41193.0 30 56245.0 31 74556.0 32 99120.0 33 131584.0 34 178596.0 35 247588.0 36 367168.0 37 614470.0 38 1237150.0 39 1300707.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.53546791982076 17.74959876080728 12.108306599098407 26.606626720273546 2 16.69026410475367 20.061214928805995 37.3538342940808 25.89468667235954 3 17.97677957931718 22.01406277926519 31.256172042700154 28.75298559871748 4 13.196210929954196 15.072647312103612 36.06045848686337 35.67068327107882 5 13.81989189560018 37.378138827858 35.34104880043473 13.460920476107086 6 34.86082551466035 36.72717449978246 15.009234368822316 13.402765616734879 7 29.612716168179247 31.50686755405671 21.083314226705106 17.79710205105893 8 27.322719074793874 36.6318971166744 19.05764304244921 16.987740766082517 9 27.024046368627335 13.398365074407529 18.339068330718582 41.23852022624655 10 14.578545392835284 27.70263256238841 35.08380889279647 22.635013151979837 11 37.227143808820585 20.90142514384132 22.097154045159044 19.77427700217906 12 20.895535187187786 24.727279210122962 31.77207357165166 22.60511203103759 13 31.173419280062248 19.30955716552719 24.830206766815486 24.686816787595074 14 21.50235869068746 19.359429978570486 27.111515609964815 32.02669572077724 15 24.937625133370283 28.15530168312846 22.363781776428983 24.54329140707228 16 24.297899113392273 26.63165339433012 24.56123207963763 24.509215412639982 17 23.741354626843037 26.68624268607298 25.86780951383711 23.70459317324687 18 23.789264121001825 26.241020636963835 26.394768815816317 23.574946426218023 19 24.896598538749146 25.88071777133067 26.322915858020004 22.899767831900185 20 24.112850666806278 25.594095781075954 26.358977738220542 23.93407581389723 21 23.86605922633501 25.83982657801191 26.673740632486563 23.620373563166513 22 24.564391443359828 25.152394165828685 26.017518220501923 24.265696170309564 23 23.850894280468452 25.433916040360423 26.49907295241637 24.216116726754755 24 23.775633723228907 25.282266581694827 26.53064402275464 24.411455672321626 25 24.14852890998341 25.17480308137257 26.376421939343825 24.30024606930019 26 23.794883275050598 25.43651123198937 26.694953503192764 24.07365198976727 27 24.243670891789083 25.89552164705755 26.0226183362249 23.838189124928462 28 23.996540948061863 26.021963896596734 25.87557252184023 24.10592263350117 29 23.758212088989346 26.193201410339967 26.30077774508087 23.747808755589816 30 24.33867747229238 25.848605095782883 25.830325919961584 23.982391511963154 31 23.961787947117667 25.366847261914867 26.413521896195945 24.257842894771525 32 23.47745748850443 25.937338082609234 26.33056603160447 24.254638397281862 33 23.68505025193669 25.305081701145856 26.475761361523283 24.53410668539417 34 24.053793132084873 25.24221036307408 27.026709260907477 23.67728724393357 35 23.858567020936654 25.284703805137664 26.591732577011744 24.264996596913935 36 23.63204064205492 24.945816912164272 27.045417207519645 24.37672523826116 37 23.45416846449507 24.685372507036355 27.15297097537682 24.70748805309175 38 23.463037249800962 24.509599049663393 27.40463686273377 24.622726837801878 39 22.9926079915654 24.426236981164777 28.099380945245517 24.481774082024305 40 23.44812053965543 24.201583653632635 28.120751784137827 24.229544022574103 41 22.7879940567855 24.12070394234432 28.530972596581748 24.56032940428843 42 22.36784381550038 24.36767591788543 28.456366478970374 24.80811378764382 43 21.98199523748486 23.819300643246454 28.513550962342187 25.6851531569265 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 412.0 1 538.5 2 665.0 3 2212.5 4 3760.0 5 3760.0 6 4812.0 7 5864.0 8 5314.0 9 4764.0 10 6294.5 11 7825.0 12 7825.0 13 12069.0 14 16313.0 15 27209.5 16 38106.0 17 31449.0 18 24792.0 19 24792.0 20 28224.5 21 31657.0 22 30194.5 23 28732.0 24 35674.0 25 42616.0 26 42616.0 27 52464.0 28 62312.0 29 71534.5 30 80757.0 31 94454.0 32 108151.0 33 108151.0 34 124381.5 35 140612.0 36 159526.5 37 178441.0 38 199242.5 39 220044.0 40 220044.0 41 241971.5 42 263899.0 43 286353.0 44 308807.0 45 330955.0 46 353103.0 47 353103.0 48 371276.5 49 389450.0 50 394095.0 51 398740.0 52 389897.5 53 381055.0 54 381055.0 55 357113.5 56 333172.0 57 307903.0 58 282634.0 59 259231.0 60 235828.0 61 235828.0 62 205346.0 63 174864.0 64 146673.0 65 118482.0 66 97567.0 67 76652.0 68 76652.0 69 62276.0 70 47900.0 71 38636.5 72 29373.0 73 23698.5 74 18024.0 75 18024.0 76 14362.5 77 10701.0 78 8510.5 79 6320.0 80 4830.5 81 3341.0 82 3341.0 83 2516.5 84 1692.0 85 1252.5 86 813.0 87 599.0 88 385.0 89 385.0 90 262.0 91 139.0 92 93.5 93 48.0 94 33.0 95 18.0 96 18.0 97 11.0 98 4.0 99 4.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4431272.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.54746985448913 #Duplication Level Percentage of deduplicated Percentage of total 1 78.93403630524782 43.05651965853656 2 10.945436853277382 11.940917735967247 3 3.757658276498775 6.149122546823656 4 1.788283839648261 3.901854353379343 5 1.021829402673412 2.786910426937929 6 0.6703992258848611 2.1941148938656387 7 0.4734286461040409 1.8077034361128241 8 0.35725348187930944 1.5589818826578328 9 0.2697670187741406 1.3243597491886054 >10 1.635813059960794 16.494863914243787 >50 0.107992670928418 3.999034432396109 >100 0.037066043852961784 3.319055013032626 >500 5.796983695067288E-4 0.20605646793004462 >1k 2.8984893656735665E-4 0.24149449339915122 >5k 1.2422097281452116E-4 0.5179076630790056 >10k+ 4.140699093817372E-5 0.501103332449665 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22186 0.5006688824337572 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9210 0.20784099915329052 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8499 0.19179594482126125 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5221 0.11782169995432464 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 2.256688372999897E-5 0.0 0.0 0.0 6 2.256688372999897E-5 2.256688372999897E-5 0.0 0.0 0.0 7 2.256688372999897E-5 2.256688372999897E-5 0.0 2.256688372999897E-5 0.0 8 4.513376745999794E-5 2.256688372999897E-5 0.0 2.256688372999897E-5 0.0 9 4.513376745999794E-5 2.256688372999897E-5 0.0 2.256688372999897E-5 0.0 10 4.513376745999794E-5 2.256688372999897E-5 0.0 6.770065118999691E-5 0.0 11 4.513376745999794E-5 2.256688372999897E-5 0.0 9.026753491999588E-5 0.0 12 4.513376745999794E-5 2.256688372999897E-5 0.0 2.0310195356999073E-4 4.513376745999794E-5 13 4.513376745999794E-5 2.256688372999897E-5 0.0 2.0310195356999073E-4 4.513376745999794E-5 14 4.513376745999794E-5 2.256688372999897E-5 0.0 2.4823572102998867E-4 4.513376745999794E-5 15 4.513376745999794E-5 2.256688372999897E-5 0.0 2.933694884899866E-4 1.1283441864999485E-4 16 4.513376745999794E-5 2.256688372999897E-5 0.0 3.836370234099825E-4 1.1283441864999485E-4 17 4.513376745999794E-5 2.256688372999897E-5 0.0 4.964714420599773E-4 1.3540130237999382E-4 18 4.513376745999794E-5 2.256688372999897E-5 0.0 5.416052095199753E-4 1.8053506983999176E-4 19 4.513376745999794E-5 2.256688372999897E-5 0.0 5.867389769799732E-4 1.8053506983999176E-4 20 6.770065118999691E-5 2.256688372999897E-5 0.0 7.22140279359967E-4 1.8053506983999176E-4 21 6.770065118999691E-5 2.256688372999897E-5 0.0 0.0010380766515799527 1.8053506983999176E-4 22 6.770065118999691E-5 2.256688372999897E-5 0.0 0.0017602169309399198 2.256688372999897E-4 23 6.770065118999691E-5 2.256688372999897E-5 0.0 0.002234121489269898 2.256688372999897E-4 24 6.770065118999691E-5 2.256688372999897E-5 0.0 0.003227064373389853 2.256688372999897E-4 25 6.770065118999691E-5 2.256688372999897E-5 0.0 0.00372353581544983 2.256688372999897E-4 26 6.770065118999691E-5 2.256688372999897E-5 0.0 0.004423109211079798 2.4823572102998867E-4 27 6.770065118999691E-5 2.256688372999897E-5 0.0 0.01405916856378936 2.4823572102998867E-4 28 6.770065118999691E-5 2.256688372999897E-5 0.0 0.08654399910454605 2.4823572102998867E-4 29 6.770065118999691E-5 2.256688372999897E-5 0.0 0.20770559785091053 2.4823572102998867E-4 30 6.770065118999691E-5 2.256688372999897E-5 0.0 0.35718863567842374 2.4823572102998867E-4 31 6.770065118999691E-5 2.256688372999897E-5 0.0 0.8400296799654817 2.4823572102998867E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4510 0.0 17.76164 37 AACGCAG 8775 0.0 16.866098 5 GGTATCA 4950 0.0 15.584849 1 ACGCAGA 9940 0.0 14.907948 6 CGCAGAG 10160 0.0 14.585139 7 GGACCGT 295 0.0 14.423729 6 GGAGTGT 1595 0.0 14.382446 6 TACTTAC 1080 0.0 14.217593 31 AGAGTAC 10590 0.0 13.992919 10 GTATAGA 670 0.0 13.80597 1 CAGAGTA 10945 0.0 13.67428 9 TATACCG 285 0.0 13.631578 5 CAACGCA 10955 0.0 13.628024 4 TCAACGC 11020 0.0 13.530853 3 CTTAGAC 690 0.0 13.405797 3 CTATACT 760 0.0 13.388158 4 ATCAACG 11060 0.0 13.381555 2 GTACCGT 265 1.8189894E-12 13.264152 6 GCAGAGT 11375 0.0 13.254945 8 CGTTACG 475 0.0 13.2421055 24 >>END_MODULE