##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727332.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3327553 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40651193234187 33.0 31.0 34.0 31.0 34.0 2 32.554868096766604 34.0 31.0 34.0 31.0 34.0 3 32.64753829615937 34.0 31.0 34.0 31.0 34.0 4 36.1664382205182 37.0 35.0 37.0 35.0 37.0 5 35.97653771404993 37.0 35.0 37.0 35.0 37.0 6 35.98216437123616 37.0 35.0 37.0 35.0 37.0 7 35.95167860587044 37.0 35.0 37.0 35.0 37.0 8 35.904628716657555 37.0 35.0 37.0 35.0 37.0 9 37.75503290255632 39.0 37.0 39.0 35.0 39.0 10 37.574420302246125 39.0 37.0 39.0 35.0 39.0 11 37.68478067817402 39.0 37.0 39.0 35.0 39.0 12 37.60773667617015 39.0 37.0 39.0 35.0 39.0 13 37.685171055126695 39.0 37.0 39.0 35.0 39.0 14 38.962853484227 40.0 38.0 41.0 36.0 41.0 15 38.88946051347642 40.0 38.0 41.0 36.0 41.0 16 38.85244141866411 40.0 38.0 41.0 35.0 41.0 17 38.7888081722515 40.0 38.0 41.0 35.0 41.0 18 38.74379791997303 40.0 38.0 41.0 35.0 41.0 19 38.801163497621225 40.0 38.0 41.0 35.0 41.0 20 38.76439954525142 40.0 38.0 41.0 35.0 41.0 21 38.724109578419935 40.0 38.0 41.0 35.0 41.0 22 38.6999010984949 40.0 38.0 41.0 35.0 41.0 23 38.6353100912292 40.0 38.0 41.0 34.0 41.0 24 38.602021665770614 40.0 38.0 41.0 34.0 41.0 25 38.49515605010649 40.0 38.0 41.0 34.0 41.0 26 38.40161373838373 40.0 38.0 41.0 34.0 41.0 27 38.32478220482138 40.0 38.0 41.0 34.0 41.0 28 38.24070630881011 40.0 38.0 41.0 34.0 41.0 29 38.1739909176503 40.0 38.0 41.0 34.0 41.0 30 38.129872311575504 40.0 38.0 41.0 34.0 41.0 31 38.054011160753866 40.0 38.0 41.0 33.0 41.0 32 37.97581826645586 40.0 37.0 41.0 33.0 41.0 33 37.89822491181959 40.0 37.0 41.0 33.0 41.0 34 37.82432375983193 40.0 37.0 41.0 33.0 41.0 35 37.78350878257987 40.0 37.0 41.0 33.0 41.0 36 37.70319661324703 40.0 37.0 41.0 33.0 41.0 37 37.64150623596378 40.0 37.0 41.0 33.0 41.0 38 37.575412021987326 40.0 37.0 41.0 33.0 41.0 39 37.46775393209364 40.0 37.0 41.0 32.0 41.0 40 37.38129610557668 40.0 37.0 41.0 32.0 41.0 41 37.29123022232854 40.0 37.0 41.0 32.0 41.0 42 37.21205131819087 39.0 37.0 41.0 31.0 41.0 43 35.54636515180975 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 3.0 11 3.0 12 5.0 13 3.0 14 1.0 15 5.0 16 12.0 17 20.0 18 56.0 19 122.0 20 223.0 21 567.0 22 1089.0 23 2006.0 24 3479.0 25 5738.0 26 9206.0 27 13348.0 28 19581.0 29 27686.0 30 38554.0 31 51681.0 32 69537.0 33 92793.0 34 127695.0 35 179634.0 36 271032.0 37 454831.0 38 938804.0 39 1019836.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78980590241538 17.46589761305079 11.910914717211115 26.833381767322717 2 16.681176828738717 19.726988570880764 37.72393707928919 25.867897521091326 3 18.14089813144975 21.877277386716305 31.05158655624719 28.93023792558676 4 13.318375394772076 14.835706598813001 35.972860537458004 35.87305746895692 5 13.858562132594132 37.47426412141294 35.300474552922225 13.366699193070705 6 35.25698914487613 36.40852602497992 14.895149679058456 13.439335151085496 7 29.884753150438176 31.517965303633027 20.847661930553773 17.749619615375025 8 27.307303595164374 37.16451698891047 18.786928412560222 16.741251003364933 9 27.50276254052152 13.282553275635278 17.931074275901842 41.28360990794136 10 14.513277474468476 27.705433993087414 34.99102794155345 22.79026059089066 11 37.77803088335482 20.81030715363512 21.67896349058903 19.732698472421024 12 20.927149770416882 24.30140105957741 31.817043935889227 22.954405234116482 13 31.325000683685577 19.186982145738927 24.609465273731175 24.878551896844318 14 21.545862680474208 19.04044804094781 26.836116509639368 32.577572768938616 15 25.3405129835648 27.874988016719794 22.125537895264177 24.65896110445123 16 24.42479503707379 26.56618842735187 24.43456197391897 24.57445456165537 17 24.061074308959167 26.47020197724875 25.43169109552876 24.03703261826333 18 23.969024685707485 26.400511126344195 26.0585481283093 23.57191605963902 19 25.33290979888224 25.79366880106793 25.85046729533684 23.022954104712984 20 24.299688089115335 25.376906092855624 25.952434116000557 24.370971702028488 21 23.957154100926417 25.809776733834145 26.51029149648405 23.722777668755388 22 24.798372858373703 24.839123524103147 25.58180140181088 24.780702215712267 23 23.84226487151369 25.321640256368568 26.36862583405884 24.467469038058898 24 23.868169793238454 24.981209916115535 26.387438457028335 24.763181833617676 25 24.34109990133891 25.034492313120182 25.95471807661666 24.669689708924246 26 23.907267592732556 25.244616689801784 26.44889502886956 24.399220688596092 27 24.583680560459893 25.763706844038246 25.674331858876474 23.978280736625383 28 24.16463389163148 26.184526587555478 25.322091038069118 24.328748482743926 29 24.000008414591743 26.109366252017622 26.00836109898174 23.88226423440889 30 24.88807841678254 25.63862994819316 25.41615415291657 24.057137482107724 31 24.328237596816642 25.244676794028525 26.040005974360135 24.3870796347947 32 23.817351669530133 25.927701226697213 25.949849634250754 24.305097469521897 33 23.987626943883388 25.05955577567059 26.04177904904896 24.911038231397065 34 24.29202480020604 25.284105166769695 26.68423312866842 23.739636904355844 35 24.187082820318714 25.18096631368456 26.07162079762516 24.560330068371563 36 23.96379561798114 24.91311182721958 26.669327280437006 24.453765274362272 37 23.67917205225582 24.848409627134412 26.80927997240014 24.663138348209632 38 24.128661511927834 24.543470832771106 26.67891390460197 24.648953750699086 39 23.282153582527464 24.683754097981307 27.535910021568398 24.498182297922828 40 24.169652594564234 24.24592485829677 27.31998558700643 24.264436960132567 41 23.29384385462831 24.42296185815823 27.593129245424493 24.690065041788966 42 22.956899559526175 24.55639324152012 27.766499887454838 24.72020731149887 43 22.58281085229897 24.019392027715263 27.470817144009423 25.926979975976337 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 200.0 1 309.0 2 418.0 3 1413.5 4 2409.0 5 2409.0 6 3091.0 7 3773.0 8 3451.0 9 3129.0 10 4121.0 11 5113.0 12 5113.0 13 7734.0 14 10355.0 15 16940.0 16 23525.0 17 19866.0 18 16207.0 19 16207.0 20 18592.5 21 20978.0 22 20380.0 23 19782.0 24 24807.5 25 29833.0 26 29833.0 27 36360.0 28 42887.0 29 49668.5 30 56450.0 31 66647.0 32 76844.0 33 76844.0 34 88230.0 35 99616.0 36 113948.0 37 128280.0 38 144896.0 39 161512.0 40 161512.0 41 177770.5 42 194029.0 43 211587.0 44 229145.0 45 248463.0 46 267781.0 47 267781.0 48 283205.5 49 298630.0 50 304989.5 51 311349.0 52 302704.5 53 294060.0 54 294060.0 55 275941.5 56 257823.0 57 237555.0 58 217287.0 59 199009.5 60 180732.0 61 180732.0 62 157287.5 63 133843.0 64 112204.5 65 90566.0 66 74727.0 67 58888.0 68 58888.0 69 48031.5 70 37175.0 71 30289.0 72 23403.0 73 18703.0 74 14003.0 75 14003.0 76 11099.0 77 8195.0 78 6405.0 79 4615.0 80 3545.0 81 2475.0 82 2475.0 83 1862.5 84 1250.0 85 922.0 86 594.0 87 424.0 88 254.0 89 254.0 90 175.0 91 96.0 92 60.0 93 24.0 94 20.0 95 16.0 96 16.0 97 11.0 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3327553.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.67286175532637 #Duplication Level Percentage of deduplicated Percentage of total 1 79.17877473148705 44.08108979582207 2 10.839964452044068 12.069836847426032 3 3.661840153305322 6.115953618752109 4 1.7728210032320404 3.9479207451950558 5 1.0099034288662714 2.8112106990751005 6 0.6826384781932169 2.2802662575190404 7 0.4901523459793353 1.9101728657729504 8 0.3488381207607316 1.5536653177680047 9 0.27753654913887726 1.3906128539033151 >10 1.6130672571164244 16.39347471921934 >50 0.09315765123704285 3.4743419681010517 >100 0.030064466563832222 2.695440021996019 >500 7.01639435435709E-4 0.24780506469006175 >1k 3.7780584815459847E-4 0.2998179854657789 >5k 1.0794452804417098E-4 0.3275522007980012 >10k+ 5.397226402208549E-5 0.40083903849604036 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13340 0.4008951923530594 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5659 0.17006490955966744 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5242 0.1575331782844631 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.005211336979456E-5 0.0 2 0.0 0.0 0.0 3.005211336979456E-5 0.0 3 0.0 0.0 0.0 3.005211336979456E-5 0.0 4 0.0 0.0 0.0 3.005211336979456E-5 0.0 5 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 6 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 7 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 8 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 9 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 10 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 11 0.0 6.010422673958912E-5 0.0 3.005211336979456E-5 0.0 12 0.0 6.010422673958912E-5 0.0 6.010422673958912E-5 0.0 13 0.0 6.010422673958912E-5 0.0 6.010422673958912E-5 0.0 14 0.0 6.010422673958912E-5 0.0 6.010422673958912E-5 6.010422673958912E-5 15 0.0 6.010422673958912E-5 0.0 9.015634010938369E-5 1.2020845347917824E-4 16 0.0 6.010422673958912E-5 0.0 1.502605668489728E-4 1.502605668489728E-4 17 0.0 6.010422673958912E-5 0.0 1.8031268021876737E-4 1.502605668489728E-4 18 0.0 6.010422673958912E-5 0.0 2.1036479358856194E-4 1.502605668489728E-4 19 0.0 6.010422673958912E-5 0.0 2.7046902032815107E-4 1.502605668489728E-4 20 0.0 6.010422673958912E-5 0.0 4.207295871771239E-4 1.502605668489728E-4 21 0.0 6.010422673958912E-5 0.0 7.51302834244864E-4 1.8031268021876737E-4 22 0.0 6.010422673958912E-5 0.0 0.0013523451016407553 2.1036479358856194E-4 23 0.0 6.010422673958912E-5 0.0 0.0015927620085991118 3.005211336979456E-4 24 0.0 6.010422673958912E-5 0.0 0.002344064842843976 3.005211336979456E-4 25 0.0 6.010422673958912E-5 0.0 0.0028549507701304835 3.3057324706774015E-4 26 0.0 6.010422673958912E-5 0.0 0.0036062536043753473 3.3057324706774015E-4 27 0.0 6.010422673958912E-5 0.0 0.01093896926660522 3.3057324706774015E-4 28 0.0 6.010422673958912E-5 0.0 0.07005147626499113 3.3057324706774015E-4 29 0.0 6.010422673958912E-5 0.0 0.17048563914684453 3.3057324706774015E-4 30 0.0 6.010422673958912E-5 0.0 0.2910547179864603 3.3057324706774015E-4 31 0.0 6.010422673958912E-5 0.0 0.6966680921385775 3.3057324706774015E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2820 0.0 18.434397 37 CGTTACG 505 0.0 18.31683 24 CTCGTTA 790 0.0 16.626581 22 TCGTTAC 695 0.0 15.971223 23 TACGGAT 1240 0.0 15.814517 27 GTTACGG 1060 0.0 15.533019 25 AACGCAG 6115 0.0 15.399018 5 TAGATCG 145 5.3551048E-8 15.310345 5 TACTTAC 1100 0.0 15.136363 31 TAAGACT 640 0.0 15.03125 4 ACGGATG 1305 0.0 14.743296 28 GGGTAAG 2275 0.0 14.718681 1 ACCCGAC 2030 0.0 14.490148 11 GGAGTGT 1430 0.0 14.48951 6 GGTATCA 3745 0.0 14.473966 1 CACCCGA 2115 0.0 14.170213 10 GTATAAG 470 0.0 14.170212 1 GACCGTG 550 0.0 14.127272 7 CTTAGAC 565 0.0 14.079645 3 TAGACAG 645 0.0 14.054264 5 >>END_MODULE