##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727330.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3088037 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28994924607445 33.0 31.0 34.0 30.0 34.0 2 32.412398232275066 34.0 31.0 34.0 31.0 34.0 3 32.50428994212181 34.0 31.0 34.0 31.0 34.0 4 36.04327020693081 37.0 35.0 37.0 35.0 37.0 5 35.84775247187777 37.0 35.0 37.0 35.0 37.0 6 35.87986899120703 37.0 35.0 37.0 35.0 37.0 7 35.83439382364914 37.0 35.0 37.0 35.0 37.0 8 35.80019151324935 37.0 35.0 37.0 35.0 37.0 9 37.62702713730438 39.0 37.0 39.0 35.0 39.0 10 37.46801026023976 39.0 37.0 39.0 35.0 39.0 11 37.58021390287746 39.0 37.0 39.0 35.0 39.0 12 37.511090378774604 39.0 37.0 39.0 35.0 39.0 13 37.587356628175115 39.0 37.0 39.0 35.0 39.0 14 38.74610925970123 40.0 38.0 41.0 35.0 41.0 15 38.67520207821344 40.0 38.0 41.0 35.0 41.0 16 38.65001390851211 40.0 38.0 41.0 35.0 41.0 17 38.60814718217431 40.0 38.0 41.0 34.0 41.0 18 38.61043763400503 40.0 38.0 41.0 34.0 41.0 19 38.67346149026064 40.0 38.0 41.0 34.0 41.0 20 38.639580095704815 40.0 38.0 41.0 34.0 41.0 21 38.592887002325426 40.0 38.0 41.0 34.0 41.0 22 38.541220199110306 40.0 38.0 41.0 34.0 41.0 23 38.46155664585625 40.0 38.0 41.0 34.0 41.0 24 38.41871842856805 40.0 38.0 41.0 34.0 41.0 25 38.29783127598536 40.0 38.0 41.0 34.0 41.0 26 38.170167650193314 40.0 38.0 41.0 34.0 41.0 27 38.05316840439412 40.0 37.0 41.0 33.0 41.0 28 37.94026917423593 40.0 37.0 41.0 33.0 41.0 29 37.80828144222365 40.0 37.0 41.0 33.0 41.0 30 37.70101005914113 40.0 37.0 41.0 33.0 41.0 31 37.55709792337333 39.0 36.0 41.0 33.0 41.0 32 37.41904452569707 39.0 36.0 41.0 33.0 41.0 33 37.269368534120545 39.0 36.0 41.0 32.0 41.0 34 37.12499429249067 39.0 35.0 41.0 32.0 41.0 35 37.00058775202499 39.0 35.0 41.0 31.0 41.0 36 36.86523574685148 39.0 35.0 41.0 31.0 41.0 37 36.724552847002805 39.0 35.0 41.0 31.0 41.0 38 36.58020969308334 39.0 35.0 41.0 30.0 41.0 39 36.421755309279 39.0 35.0 41.0 30.0 41.0 40 36.23372776945354 39.0 35.0 40.0 30.0 41.0 41 36.06089143361948 39.0 35.0 40.0 29.0 41.0 42 35.87096203834345 39.0 35.0 40.0 28.0 41.0 43 34.22120525110289 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 17.0 11 17.0 12 17.0 13 7.0 14 7.0 15 11.0 16 20.0 17 35.0 18 88.0 19 183.0 20 391.0 21 833.0 22 1563.0 23 2987.0 24 5031.0 25 8214.0 26 12711.0 27 19225.0 28 27984.0 29 38483.0 30 50119.0 31 63294.0 32 79280.0 33 103153.0 34 138480.0 35 187349.0 36 278514.0 37 470809.0 38 813184.0 39 786029.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.28854414632985 17.35290088816941 13.117297493520965 24.24125747197977 2 16.28532948277498 22.736482755873716 36.140175781572566 24.83801197977874 3 19.06764718168856 23.793011547465266 31.042536083602624 26.09680518724355 4 13.242911273407671 14.959244335479141 34.69404673583898 37.10379765527421 5 14.673820294251655 37.81823210019828 33.80027506147109 13.707672544078973 6 34.78844327318617 35.64737080546638 14.838811840661236 14.72537408068621 7 28.731488644728024 30.901637512762964 21.772083689411755 18.59479015309726 8 28.482301215950457 35.40171312714194 19.509351733803708 16.6066339231039 9 26.088709429323547 13.964308070142941 19.356374292147407 40.5906082083861 10 15.052928446129368 28.45943879558438 33.93495609022819 22.55267666805806 11 35.593453057719195 21.86563826793526 21.811429072902946 20.7294796014426 12 20.759239607556516 26.260857625734406 31.527633898168965 21.452268868540113 13 32.10764637858938 18.940576165376257 25.43444265726091 23.517334798773458 14 21.520564682353225 19.960609280264453 28.922159935259845 29.596666102122484 15 24.874021911006896 28.501990099211895 23.67371245875616 22.95027553102505 16 23.080520084441993 25.930259255313327 26.094085012582426 24.895135647662254 17 22.786514539819308 26.99980602564024 27.949697493909557 22.26398194063089 18 22.61394536399661 25.41838067354763 28.827731014880975 23.139942947574788 19 23.384596751917154 26.431289521466226 28.70250583137443 21.48160789524219 20 22.736126542525234 26.487344549304296 28.417049407115265 22.3594795010552 21 22.135259389702906 27.24672664220021 28.323818658908557 22.29419530918833 22 22.68078394138412 26.669304804314198 27.79921354569262 22.85069770860906 23 22.184157767539702 26.358136252901115 28.080103962484905 23.377602017074278 24 22.27991439221745 26.441004430970228 28.39865584512103 22.8804253316913 25 22.61316817123629 26.33358991488768 28.159571922227617 22.893669991648416 26 22.326092595393124 26.610982964258522 28.770056835458902 22.292867604889448 27 22.738458120806197 27.04828342406519 28.502443461655414 21.7108149934732 28 22.600603554944453 27.228430229301008 28.267407417722 21.903558798032535 29 22.04342111185844 27.340766966198913 28.64175526394276 21.97405665799989 30 21.80475816837687 27.531697320984172 28.669928501504355 21.993616009134605 31 21.853624163181983 26.831543793030978 28.491951359391095 22.822880684395944 32 21.47927631696123 27.258255001478286 28.512903180888056 22.749565500672432 33 22.18580930215538 26.98274016794488 28.189688141690013 22.641762388209727 34 22.27813332547505 26.96479996839416 28.570156380898286 22.186910325232503 35 21.98603837972149 27.05278466546871 28.61769467140452 22.343482283405283 36 21.80430480593335 26.766583431480907 28.719409773911387 22.709701988674357 37 21.3606572719174 26.367430182993274 28.833559960583372 23.43835258450595 38 21.38432926807548 26.419016352459508 29.327465959766673 22.86918841969834 39 21.267620821900774 26.13984223634626 29.630862583576555 22.961674358176406 40 21.40239899975292 26.19699828726145 29.897342551271244 22.503260161714383 41 21.12895668024703 25.7969059308551 30.074963480036022 22.999173908861845 42 20.496613220631748 26.1475493978861 30.012690910115392 23.34314647136676 43 20.285961599553374 25.57802901973001 30.07405675514898 24.061952625567635 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 195.0 1 401.0 2 607.0 3 4359.5 4 8112.0 5 8112.0 6 10962.0 7 13812.0 8 12736.0 9 11660.0 10 14626.5 11 17593.0 12 17593.0 13 29058.5 14 40524.0 15 64317.0 16 88110.0 17 68518.0 18 48926.0 19 48926.0 20 50392.5 21 51859.0 22 39386.5 23 26914.0 24 30921.5 25 34929.0 26 34929.0 27 40865.0 28 46801.0 29 52924.0 30 59047.0 31 64608.0 32 70169.0 33 70169.0 34 78264.0 35 86359.0 36 98499.5 37 110640.0 38 124367.5 39 138095.0 40 138095.0 41 152979.5 42 167864.0 43 182536.0 44 197208.0 45 211290.5 46 225373.0 47 225373.0 48 241357.5 49 257342.0 50 260418.0 51 263494.0 52 263918.0 53 264342.0 54 264342.0 55 243790.0 56 223238.0 57 200541.5 58 177845.0 59 162738.0 60 147631.0 61 147631.0 62 128311.5 63 108992.0 64 91703.5 65 74415.0 66 61672.0 67 48929.0 68 48929.0 69 39843.5 70 30758.0 71 24901.5 72 19045.0 73 15234.5 74 11424.0 75 11424.0 76 9183.5 77 6943.0 78 5567.0 79 4191.0 80 3250.5 81 2310.0 82 2310.0 83 1777.0 84 1244.0 85 949.5 86 655.0 87 473.0 88 291.0 89 291.0 90 186.0 91 81.0 92 63.0 93 45.0 94 32.0 95 19.0 96 19.0 97 11.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3088037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.78838681456594 #Duplication Level Percentage of deduplicated Percentage of total 1 81.13881185750527 44.45464609723289 2 10.00451347081536 10.962623078611353 3 3.274569641860666 5.382251645684906 4 1.6162532599809005 3.5420763519254717 5 0.9060086764693245 2.4819376911877136 6 0.6065780297471112 1.9940059036201208 7 0.40822575097818936 1.5656221246581798 8 0.30157999178590866 1.3218464996399988 9 0.2343473803443366 1.155556343095715 >10 1.3872110584671267 13.715635429026229 >50 0.08012956127379325 3.0065139272277457 >100 0.03652076734906024 3.681038358429408 >500 0.0030087440965779937 1.171169808782685 >1k 0.0018878394327843454 1.9650079302618715 >5k 1.1798996454902158E-4 0.3966604816293334 >10k+ 2.3597992909804317E-4 3.2034083289863076 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 50624 1.6393585957681207 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17968 0.5818583132261692 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16862 0.5460426801880935 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13654 0.44215791455866627 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 6615 0.21421375456317396 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5657 0.18319081021373773 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4544 0.14714849595390211 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 4304 0.13937656835070306 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3981 0.12891684911806434 No Hit GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 3957 0.12813965635774444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.476606335999212E-5 0.0 3 0.0 0.0 0.0 9.714909503998818E-5 0.0 4 0.0 0.0 0.0 1.619151583999803E-4 0.0 5 0.0 0.0 0.0 1.619151583999803E-4 0.0 6 0.0 0.0 0.0 1.619151583999803E-4 0.0 7 0.0 0.0 0.0 1.619151583999803E-4 0.0 8 3.238303167999606E-5 0.0 0.0 1.619151583999803E-4 0.0 9 3.238303167999606E-5 0.0 0.0 1.9429819007997636E-4 3.238303167999606E-5 10 3.238303167999606E-5 0.0 0.0 1.9429819007997636E-4 3.238303167999606E-5 11 6.476606335999212E-5 0.0 0.0 2.590642534399685E-4 3.238303167999606E-5 12 6.476606335999212E-5 0.0 0.0 2.9144728511996455E-4 3.238303167999606E-5 13 6.476606335999212E-5 0.0 0.0 3.5621334847995667E-4 3.238303167999606E-5 14 6.476606335999212E-5 0.0 0.0 4.5336244351994485E-4 3.238303167999606E-5 15 9.714909503998818E-5 0.0 0.0 8.095757919999015E-4 6.476606335999212E-5 16 1.2953212671998424E-4 0.0 0.0 0.0015220024889598149 6.476606335999212E-5 17 1.2953212671998424E-4 0.0 0.0 0.002202046154239732 6.476606335999212E-5 18 1.2953212671998424E-4 0.0 0.0 0.0026877916294396733 6.476606335999212E-5 19 1.2953212671998424E-4 0.0 0.0 0.00427456018175948 6.476606335999212E-5 20 1.619151583999803E-4 0.0 0.0 0.006347074209279228 6.476606335999212E-5 21 1.619151583999803E-4 0.0 0.0 0.01020065497919876 6.476606335999212E-5 22 1.619151583999803E-4 0.0 0.0 0.014896194572798189 6.476606335999212E-5 23 1.619151583999803E-4 0.0 0.0 0.017875433487357827 6.476606335999212E-5 24 1.619151583999803E-4 0.0 0.0 0.025064466520316953 6.476606335999212E-5 25 1.619151583999803E-4 0.0 0.0 0.032253499553276076 6.476606335999212E-5 26 1.619151583999803E-4 0.0 0.0 0.03953968168127519 6.476606335999212E-5 27 1.619151583999803E-4 0.0 0.0 0.056022644806393185 6.476606335999212E-5 28 1.619151583999803E-4 0.0 0.0 0.14782853961918202 6.476606335999212E-5 29 1.619151583999803E-4 0.0 0.0 0.3340957378425194 9.714909503998818E-5 30 1.619151583999803E-4 0.0 0.0 0.5550775460268125 9.714909503998818E-5 31 1.619151583999803E-4 0.0 0.0 1.0977847739518665 1.2953212671998424E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 185 0.0 18.0 5 AGTCGGT 480 0.0 17.729166 11 CTTATAC 3845 0.0 16.984394 37 TACCGAC 165 5.4569682E-11 16.818182 7 GTACTAG 225 0.0 16.444445 1 TCTATAC 335 0.0 16.014925 3 GTATTAA 505 0.0 15.019802 1 AACGCAG 20495 0.0 14.785558 5 CGGTGAT 565 0.0 14.734513 14 CGTACAC 195 6.7484507E-10 14.23077 3 ATACCGA 170 2.4410838E-8 14.147059 6 TATACAC 1420 0.0 13.809859 37 TAGACAG 670 0.0 13.80597 5 TACACCG 215 1.9826984E-10 13.767442 5 ACGTTTA 135 6.57509E-6 13.703704 26 ATAATAC 250 1.0913936E-11 13.32 3 TAATACC 320 0.0 13.296875 4 GAGTACT 15640 0.0 13.259911 11 AGTACTT 15825 0.0 13.15166 12 CTATACA 380 0.0 13.144737 4 >>END_MODULE