##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727329.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4637610 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.332330877326896 33.0 31.0 34.0 30.0 34.0 2 32.4754597734609 34.0 31.0 34.0 31.0 34.0 3 32.56733015497206 34.0 31.0 34.0 31.0 34.0 4 36.1044100301664 37.0 35.0 37.0 35.0 37.0 5 35.909064798463 37.0 35.0 37.0 35.0 37.0 6 35.92462475283605 37.0 35.0 37.0 35.0 37.0 7 35.89119568053372 37.0 35.0 37.0 35.0 37.0 8 35.84664989078426 37.0 35.0 37.0 35.0 37.0 9 37.68490105895062 39.0 37.0 39.0 35.0 39.0 10 37.512521104620696 39.0 37.0 39.0 35.0 39.0 11 37.621837972576394 39.0 37.0 39.0 35.0 39.0 12 37.54723316535888 39.0 37.0 39.0 35.0 39.0 13 37.62748743426032 39.0 37.0 39.0 35.0 39.0 14 38.853394959903916 40.0 38.0 41.0 36.0 41.0 15 38.77644196040633 40.0 38.0 41.0 35.0 41.0 16 38.752595410135825 40.0 38.0 41.0 35.0 41.0 17 38.69610402772118 40.0 38.0 41.0 35.0 41.0 18 38.665785825026255 40.0 38.0 41.0 35.0 41.0 19 38.717614029640266 40.0 38.0 41.0 35.0 41.0 20 38.6845219843842 40.0 38.0 41.0 34.0 41.0 21 38.64151297758975 40.0 38.0 41.0 34.0 41.0 22 38.60378061113375 40.0 38.0 41.0 34.0 41.0 23 38.54037877268679 40.0 38.0 41.0 34.0 41.0 24 38.49960044074426 40.0 38.0 41.0 34.0 41.0 25 38.38237367954615 40.0 38.0 41.0 34.0 41.0 26 38.2751190807334 40.0 38.0 41.0 34.0 41.0 27 38.18523981102335 40.0 38.0 41.0 34.0 41.0 28 38.10066693835834 40.0 38.0 41.0 33.0 41.0 29 38.02035164664558 40.0 37.0 41.0 33.0 41.0 30 37.95714279553477 40.0 37.0 41.0 33.0 41.0 31 37.86272239364673 40.0 37.0 41.0 33.0 41.0 32 37.768611418381454 40.0 37.0 41.0 33.0 41.0 33 37.66845745976915 40.0 37.0 41.0 33.0 41.0 34 37.57369205258743 40.0 37.0 41.0 33.0 41.0 35 37.50455622615959 40.0 37.0 41.0 33.0 41.0 36 37.4183010214313 40.0 37.0 41.0 32.0 41.0 37 37.33361321887783 40.0 36.0 41.0 32.0 41.0 38 37.238934494276144 40.0 36.0 41.0 31.0 41.0 39 37.12804828349085 39.0 36.0 41.0 31.0 41.0 40 37.005288715523726 39.0 36.0 41.0 31.0 41.0 41 36.896000094876456 39.0 36.0 41.0 31.0 41.0 42 36.781215108644325 39.0 36.0 41.0 30.0 41.0 43 35.11405982823049 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 19.0 11 18.0 12 9.0 13 6.0 14 6.0 15 10.0 16 25.0 17 36.0 18 103.0 19 199.0 20 457.0 21 1055.0 22 1903.0 23 3457.0 24 5964.0 25 9819.0 26 15111.0 27 22811.0 28 33073.0 29 45861.0 30 62288.0 31 82163.0 32 107031.0 33 140960.0 34 190915.0 35 263648.0 36 389154.0 37 654711.0 38 1267583.0 39 1339209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63935302882304 18.013869212805734 12.608865342277594 25.737912416093632 2 16.59766560793167 20.966855772693265 37.128197498280365 25.3072811210947 3 18.15667984155632 22.512910744974242 31.44537811502045 27.885031298448986 4 13.117122828353397 15.269653981253276 35.98456963824039 35.62865355215294 5 13.972951584975881 37.49539094490481 35.04552991734967 13.48612755276964 6 34.42706480277557 36.788302595517955 15.109614650649798 13.675017951056686 7 29.119481802048902 31.48250930975222 21.36870068850119 18.029308199697688 8 27.318769797374078 36.38602642309293 19.33373008942106 16.961473690111934 9 26.47171711290945 13.689551299052743 18.940682808601846 40.89804877943596 10 14.731596662936298 27.92494409836101 34.86563121952903 22.477828019173668 11 36.531273651730096 21.328529134618908 22.346747570408034 19.793449643242962 12 20.75590659844187 25.457379986674173 31.74346268875563 22.04325072612833 13 31.234019246982818 19.38218177035154 25.166454272782744 24.217344709882894 14 21.343148733938385 19.770442102721013 27.78957264625529 31.096836517085308 15 24.63350734537833 28.581661674871324 22.810283745291215 23.974547234459127 16 23.750358482062957 26.667809496701967 25.08311393152939 24.49871808970569 17 23.35371020849101 26.97885333178081 26.623821321758406 23.043615137969773 18 23.31347396611617 26.04992657856094 27.214125379236286 23.422474076086605 19 24.300598799812832 26.079187340030746 27.279396068233424 22.340817791922994 20 23.64894848855337 26.065494942438022 27.13218662198848 23.153369947020124 21 23.40252845754602 26.286643335683678 27.19452476598938 23.116303440780918 22 23.87988640700706 25.741405594692097 26.749899193765753 23.628808804535094 23 23.230284564678787 25.847925979114244 27.128995323021986 23.79279413318498 24 23.306121040794718 25.812282619711446 27.181155810859476 23.700440528634363 25 23.649164116861918 25.650863267933268 27.102408352578163 23.597564262626655 26 23.220689104948455 25.992246006024654 27.377808828254206 23.40925606077268 27 23.5391074281796 26.364614532054226 26.94916131369391 23.147116726072266 28 23.447637899694023 26.3421676251345 26.898078967399158 23.312115507772322 29 23.153003378895594 26.600166896310817 27.11017097168585 23.136658753107742 30 23.343101295710504 26.431243679395205 26.920116180532645 23.305538844361642 31 23.28367413387499 25.861963382000642 27.146418090352576 23.707944393771793 32 22.71210817640983 26.440774450632976 27.193425061615788 23.653692311341402 33 23.09734971245965 25.978208603138253 27.151161913140605 23.773279771261492 34 23.326842921246072 25.794795163888296 27.692432093254933 23.185929821610703 35 23.156884688449438 25.870761016989352 27.386929905705742 23.585424388855465 36 22.972048102363072 25.504559460584225 27.757206837142405 23.7661855999103 37 22.814747251278135 25.139436045721826 27.77611743980197 24.26969926319807 38 22.5663218770013 25.14793180107857 28.2608067517536 24.024939570166527 39 22.393603601855265 24.961585816832375 28.68126039058912 23.96355019072324 40 22.533891379395854 24.943171159282475 28.84147222383944 23.68146523748224 41 22.086139196698298 24.716071424720923 29.176019544549884 24.02176983403089 42 21.69440724856122 24.963871476902973 29.04549972938647 24.296221545149333 43 21.29739240686474 24.492033612140737 29.184127168951246 25.026446812043275 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 580.0 1 736.0 2 892.0 3 3616.5 4 6341.0 5 6341.0 6 8190.0 7 10039.0 8 9211.0 9 8383.0 10 11146.0 11 13909.0 12 13909.0 13 21821.0 14 29733.0 15 48039.0 16 66345.0 17 52908.0 18 39471.0 19 39471.0 20 43722.5 21 47974.0 22 42007.0 23 36040.0 24 43727.5 25 51415.0 26 51415.0 27 62125.5 28 72836.0 29 82815.5 30 92795.0 31 105260.5 32 117726.0 33 117726.0 34 133713.5 35 149701.0 36 168058.5 37 186416.0 38 209233.0 39 232050.0 40 232050.0 41 255144.0 42 278238.0 43 299828.5 44 321419.0 45 340936.0 46 360453.0 47 360453.0 48 378073.0 49 395693.0 50 399626.0 51 403559.0 52 392077.5 53 380596.0 54 380596.0 55 357769.0 56 334942.0 57 308552.5 58 282163.0 59 257575.0 60 232987.0 61 232987.0 62 202466.0 63 171945.0 64 144276.0 65 116607.0 66 96590.5 67 76574.0 68 76574.0 69 62272.5 70 47971.0 71 38833.5 72 29696.0 73 23884.0 74 18072.0 75 18072.0 76 14369.5 77 10667.0 78 8437.5 79 6208.0 80 4900.0 81 3592.0 82 3592.0 83 2757.0 84 1922.0 85 1459.0 86 996.0 87 714.0 88 432.0 89 432.0 90 291.0 91 150.0 92 92.0 93 34.0 94 34.0 95 34.0 96 34.0 97 23.0 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4637610.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.584220604197974 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28333346773199 41.69052297303411 2 10.705633711232268 11.258948095583525 3 3.5486823533785654 5.598140871728487 4 1.7304327218110336 3.639738239377365 5 1.0515655432860538 2.7647877253963573 6 0.6764190614580523 2.134138148915686 7 0.47131329541062983 1.734854960969486 8 0.3594860202958843 1.5122633756291173 9 0.264998812486696 1.2541280414085823 >10 1.7264172143677976 17.068031386354008 >50 0.13376330849978532 4.758844776109305 >100 0.04647670908916131 4.145377992737565 >500 8.620391281782512E-4 0.3001254521596845 >1k 4.5154400425177294E-4 0.5047130013080539 >5k 4.104945493195086E-5 0.2093365275290308 >10k+ 1.2314836479585258E-4 1.4260484317596844 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37925 0.8177703601639638 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14749 0.31803019227576274 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13391 0.2887478679750992 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9698 0.2091163336287441 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.1562830854685926E-5 0.0 2 0.0 0.0 0.0 2.1562830854685926E-5 0.0 3 0.0 0.0 0.0 2.1562830854685926E-5 0.0 4 0.0 0.0 0.0 2.1562830854685926E-5 0.0 5 0.0 0.0 0.0 2.1562830854685926E-5 0.0 6 0.0 0.0 0.0 2.1562830854685926E-5 0.0 7 0.0 0.0 0.0 2.1562830854685926E-5 0.0 8 0.0 0.0 0.0 2.1562830854685926E-5 2.1562830854685926E-5 9 0.0 0.0 0.0 6.468849256405778E-5 4.312566170937185E-5 10 0.0 0.0 0.0 6.468849256405778E-5 4.312566170937185E-5 11 0.0 0.0 0.0 1.2937698512811556E-4 4.312566170937185E-5 12 0.0 2.1562830854685926E-5 0.0 2.587539702562311E-4 4.312566170937185E-5 13 0.0 2.1562830854685926E-5 0.0 3.0187963196560296E-4 4.312566170937185E-5 14 0.0 2.1562830854685926E-5 0.0 3.450052936749748E-4 8.62513234187437E-5 15 2.1562830854685926E-5 2.1562830854685926E-5 0.0 3.6656812452966073E-4 1.5093981598280148E-4 16 2.1562830854685926E-5 2.1562830854685926E-5 0.0 5.606336022218341E-4 2.587539702562311E-4 17 2.1562830854685926E-5 2.1562830854685926E-5 0.0 7.546990799140074E-4 2.587539702562311E-4 18 2.1562830854685926E-5 2.1562830854685926E-5 0.0 8.84076065042123E-4 2.8031680111091704E-4 19 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.0012290813587170978 2.8031680111091704E-4 20 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.0018975291152123616 3.0187963196560296E-4 21 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.003148173304784145 3.0187963196560296E-4 22 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.0054553962062355394 3.234424628202889E-4 23 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.006576663410679208 4.0969378623903263E-4 24 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.00884076065042123 4.0969378623903263E-4 25 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.009918902193155527 4.0969378623903263E-4 26 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.011643928661530401 4.3125661709371855E-4 27 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.02397786791041075 4.3125661709371855E-4 28 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.10723195784035311 4.3125661709371855E-4 29 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.25519610316520797 4.3125661709371855E-4 30 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.4305666065063686 4.3125661709371855E-4 31 2.1562830854685926E-5 2.1562830854685926E-5 0.0 0.9485273664667793 4.528194479484045E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4950 0.0 17.079798 37 AACGCAG 13890 0.0 16.715263 5 AGTCGGT 390 0.0 15.653847 11 TACGGAT 800 0.0 15.493751 27 TAGGCCG 180 2.0190782E-10 15.416667 5 TATACTG 810 0.0 15.074074 5 GTTACGG 690 0.0 15.014492 25 ACGCAGA 15765 0.0 14.738978 6 CGCAGAG 16060 0.0 14.456724 7 ACGGATG 910 0.0 13.824177 28 AGAGTAC 16720 0.0 13.808612 10 TAAGACT 795 0.0 13.729561 4 CAGAGTA 17215 0.0 13.647983 9 GTATAGA 605 0.0 13.454546 1 GCAGAGT 17415 0.0 13.385014 8 TATACAG 790 0.0 13.348101 5 TCTATAC 540 0.0 13.0185175 3 TCTTATA 7520 0.0 12.841755 37 TTACGGA 940 0.0 12.792552 26 GTATTAG 595 0.0 12.747899 1 >>END_MODULE