##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727327.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4367389 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17414729945054 33.0 31.0 34.0 30.0 34.0 2 32.31954080573084 34.0 31.0 34.0 30.0 34.0 3 32.4051418364611 34.0 31.0 34.0 30.0 34.0 4 35.97865772890851 37.0 35.0 37.0 35.0 37.0 5 35.759896130159234 37.0 35.0 37.0 35.0 37.0 6 35.776347836201445 37.0 35.0 37.0 35.0 37.0 7 35.7396442130527 37.0 35.0 37.0 33.0 37.0 8 35.70047916501141 37.0 35.0 37.0 33.0 37.0 9 37.51167345065896 39.0 37.0 39.0 35.0 39.0 10 37.33328105190538 39.0 37.0 39.0 34.0 39.0 11 37.440547887994406 39.0 37.0 39.0 35.0 39.0 12 37.37044284353878 39.0 37.0 39.0 34.0 39.0 13 37.452117042928855 39.0 37.0 39.0 35.0 39.0 14 38.60564836335852 40.0 38.0 41.0 34.0 41.0 15 38.51923700865666 40.0 38.0 41.0 34.0 41.0 16 38.49807150221792 40.0 38.0 41.0 34.0 41.0 17 38.441195872407974 40.0 38.0 41.0 34.0 41.0 18 38.4286616099459 40.0 38.0 41.0 34.0 41.0 19 38.48127199111414 40.0 38.0 41.0 34.0 41.0 20 38.44178409571485 40.0 38.0 41.0 34.0 41.0 21 38.396278188180624 40.0 38.0 41.0 34.0 41.0 22 38.342100966962185 40.0 38.0 41.0 34.0 41.0 23 38.2681329737287 40.0 38.0 41.0 34.0 41.0 24 38.218610249739605 40.0 38.0 41.0 34.0 41.0 25 38.095211120420004 40.0 37.0 41.0 33.0 41.0 26 37.95925918208797 40.0 37.0 41.0 33.0 41.0 27 37.84726915784236 40.0 37.0 41.0 33.0 41.0 28 37.74631982633102 40.0 37.0 41.0 33.0 41.0 29 37.63000341851848 40.0 37.0 41.0 33.0 41.0 30 37.53564635529375 39.0 37.0 41.0 33.0 41.0 31 37.40856287360709 39.0 36.0 41.0 32.0 41.0 32 37.29181531574128 39.0 36.0 41.0 32.0 41.0 33 37.163125153266634 39.0 36.0 41.0 31.0 41.0 34 37.03825603810423 39.0 36.0 41.0 31.0 41.0 35 36.94081452327695 39.0 35.0 40.0 31.0 41.0 36 36.82871367766874 39.0 35.0 40.0 31.0 41.0 37 36.71008215663867 39.0 35.0 40.0 30.0 41.0 38 36.584152911499295 39.0 35.0 40.0 30.0 41.0 39 36.4376246311011 39.0 35.0 40.0 30.0 41.0 40 36.2754645853621 39.0 35.0 40.0 30.0 41.0 41 36.12647030067622 39.0 35.0 40.0 29.0 41.0 42 35.96538961837381 39.0 35.0 40.0 28.0 41.0 43 34.289387091463574 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 10.0 10 37.0 11 34.0 12 20.0 13 9.0 14 14.0 15 22.0 16 30.0 17 53.0 18 125.0 19 288.0 20 675.0 21 1367.0 22 2605.0 23 4749.0 24 7843.0 25 12805.0 26 19626.0 27 28909.0 28 41108.0 29 56530.0 30 74090.0 31 94338.0 32 120363.0 33 154774.0 34 205729.0 35 279514.0 36 408869.0 37 673538.0 38 1171065.0 39 1008247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75726549661594 18.12155958628828 13.36446100862552 24.756713908470253 2 16.720195979794795 22.232734478197386 36.17142874152039 24.87564080048743 3 18.74584562996335 23.112253110496912 31.414375957809114 26.72752530173062 4 13.62461644703506 15.531156029380483 34.79930457305269 36.04492295053177 5 14.587411380117501 37.52017509775291 34.064494827458695 13.82791869467089 6 34.426747880713165 36.01852273749831 15.043610724851849 14.511118656936672 7 28.618678116375712 31.32308571551561 21.555052687086036 18.503183481022642 8 27.83125112052075 35.60795706542284 19.56631296181769 16.994478852238718 9 26.110886847954234 13.972284126740256 19.389502515118302 40.52732651018721 10 15.202332560713048 28.294182176123993 34.060671032509354 22.442814230653603 11 35.78359976635926 21.789197161049774 22.040354087991705 20.386848984599265 12 20.81493084311931 26.07429748071445 31.357957809574554 21.752813866591687 13 31.64165133904949 19.30180709801669 25.209364221964197 23.847177340969626 14 21.377120288575167 20.21319832055262 28.331779010296543 30.077902380575672 15 24.62347640661274 28.69208582061273 23.321760438559515 23.36267733421502 16 23.249337304279514 26.45592137544881 25.648345040938647 24.64639627933303 17 23.06410077050613 27.04771661054236 27.373792442120454 22.514390176831053 18 22.942998665793223 25.775972783738748 28.0126180653933 23.26841048507472 19 23.79405635724228 26.318218963321105 28.192908852405868 21.69481582703075 20 23.26355632621688 26.36815726741996 27.78053431924658 22.58775208711658 21 22.796938857518757 26.818243119630512 27.83006047778203 22.55475754506869 22 23.385528516008076 26.326484771564886 27.378280249366384 22.90970646306065 23 22.709678482956292 26.234003886532665 27.69437299951985 23.361944630991193 24 22.838084722931708 26.19411735478566 27.870084391383504 23.097713530899124 25 23.037265514933523 26.007964941982497 27.843363620689615 23.111405922394365 26 22.713822835566056 26.418507717082218 28.24183968957196 22.625829757779766 27 23.071313317865663 26.74156114786203 27.873083895206037 22.31404163906627 28 22.862676074881353 27.024979913628027 27.66614102842682 22.44620298306379 29 22.513886443364676 27.114758955522394 27.959199420981278 22.412155180131656 30 22.483204495866982 27.104043170873947 27.872786234521357 22.53996609873771 31 22.4865016603742 26.473666531650835 27.9068340374535 23.13299777052147 32 21.972121100272954 26.8252266972326 28.092780377474963 23.10987182501948 33 22.447393625802512 26.408890987269512 27.966091410680388 23.177623976247595 34 22.61921253178959 26.232607171012244 28.470282816575303 22.67789748062286 35 22.334053595867005 26.2495967270147 28.28781681686701 23.128532860251287 36 22.100985279763265 25.896456670106556 28.73506344408524 23.267494606044938 37 21.76149182039887 25.540614770060554 28.800159546126984 23.89773386341359 38 21.466029245391237 25.527174245298507 29.39426737577074 23.612529133539514 39 21.30664339723345 25.289709709851817 29.979216415116678 23.42443047779806 40 21.42316610679745 25.440371810250927 30.03155890166871 23.104903181282914 41 21.053311257595787 25.06458664433143 30.393193736578077 23.488908361494705 42 20.428223819769663 25.476113989388168 30.21079642779702 23.884865763045152 43 20.16614503539758 24.90957411854085 30.228152335411384 24.696128510650183 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 996.0 1 1099.0 2 1202.0 3 5290.0 4 9378.0 5 9378.0 6 12524.5 7 15671.0 8 14580.0 9 13489.0 10 17580.0 11 21671.0 12 21671.0 13 35090.0 14 48509.0 15 75239.0 16 101969.0 17 78856.0 18 55743.0 19 55743.0 20 58596.5 21 61450.0 22 48912.0 23 36374.0 24 42626.0 25 48878.0 26 48878.0 27 57553.0 28 66228.0 29 74619.5 30 83011.0 31 92690.5 32 102370.0 33 102370.0 34 115205.5 35 128041.0 36 146002.0 37 163963.0 38 184953.0 39 205943.0 40 205943.0 41 228489.5 42 251036.0 43 272468.0 44 293900.0 45 314295.5 46 334691.0 47 334691.0 48 352261.0 49 369831.0 50 371189.0 51 372547.0 52 365058.0 53 357569.0 54 357569.0 55 333421.0 56 309273.0 57 282514.0 58 255755.0 59 233306.5 60 210858.0 61 210858.0 62 183625.0 63 156392.0 64 131123.0 65 105854.0 66 88231.5 67 70609.0 68 70609.0 69 57849.0 70 45089.0 71 36759.0 72 28429.0 73 22906.0 74 17383.0 75 17383.0 76 13836.5 77 10290.0 78 8209.5 79 6129.0 80 4754.0 81 3379.0 82 3379.0 83 2625.5 84 1872.0 85 1410.5 86 949.0 87 687.0 88 425.0 89 425.0 90 288.5 91 152.0 92 100.5 93 49.0 94 38.5 95 28.0 96 28.0 97 19.5 98 11.0 99 7.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4367389.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.27328782264177 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07590877259294 45.62407949842369 2 10.14239137471994 11.41491418078989 3 3.198407803784939 5.399547687497202 4 1.5846662150263842 3.5669751208398415 5 0.9175133158005703 2.5815745450575953 6 0.5979996422017032 2.019084359007194 7 0.41343660268970633 1.6285805857701123 8 0.32029522523227966 1.4419252318171156 9 0.23996657514297276 1.2153337335750691 >10 1.3940363632172426 14.303983197650414 >50 0.08248406898907819 3.150314925019346 >100 0.029724994364494835 2.926728818829042 >500 0.0017470384220455131 0.6777098227610442 >1k 0.0011782350472035862 1.1606482462240686 >5k 8.125758946229935E-5 0.29470611432731986 >10k+ 1.625151789245987E-4 2.593893932410971 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 57293 1.3118364313323132 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20939 0.479439775115063 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19546 0.44754428790290945 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15675 0.3589100947957693 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 6787 0.15540177437823835 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6103 0.13974024296896842 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4943 0.11317975110529425 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4830 0.11059239284616049 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.2896975744546683E-5 2.2896975744546683E-5 2 0.0 0.0 0.0 2.2896975744546683E-5 2.2896975744546683E-5 3 0.0 0.0 0.0 2.2896975744546683E-5 2.2896975744546683E-5 4 0.0 0.0 0.0 2.2896975744546683E-5 2.2896975744546683E-5 5 0.0 0.0 0.0 2.2896975744546683E-5 2.2896975744546683E-5 6 0.0 0.0 0.0 2.2896975744546683E-5 4.5793951489093366E-5 7 0.0 0.0 0.0 2.2896975744546683E-5 9.158790297818673E-5 8 0.0 0.0 0.0 2.2896975744546683E-5 9.158790297818673E-5 9 0.0 0.0 0.0 4.5793951489093366E-5 9.158790297818673E-5 10 0.0 0.0 0.0 1.373818544672801E-4 9.158790297818673E-5 11 2.2896975744546683E-5 0.0 2.2896975744546683E-5 3.205576604236536E-4 9.158790297818673E-5 12 2.2896975744546683E-5 0.0 2.2896975744546683E-5 4.808364906354804E-4 9.158790297818673E-5 13 2.2896975744546683E-5 0.0 2.2896975744546683E-5 5.495274178691204E-4 9.158790297818673E-5 14 2.2896975744546683E-5 0.0 2.2896975744546683E-5 6.182183451027605E-4 1.1448487872273342E-4 15 2.2896975744546683E-5 0.0 2.2896975744546683E-5 8.929820540373207E-4 1.373818544672801E-4 16 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.0015798913263737212 1.602788302118268E-4 17 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.001969139914031015 1.602788302118268E-4 18 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.002243903622965575 2.5186673319001353E-4 19 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.003045297774024709 2.5186673319001353E-4 20 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.004739673979121163 2.747637089345602E-4 21 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.007258341311021299 2.747637089345602E-4 22 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.011219518114827876 2.747637089345602E-4 23 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.01373818544672801 3.205576604236536E-4 24 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.019233459625419214 3.205576604236536E-4 25 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.022439036229655752 3.205576604236536E-4 26 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.026537594887929606 3.6635161191274693E-4 27 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.046572448664407955 3.6635161191274693E-4 28 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.18645007348784365 3.6635161191274693E-4 29 4.5793951489093366E-5 0.0 2.2896975744546683E-5 0.44001118288295366 3.6635161191274693E-4 30 6.869092723364006E-5 0.0 2.2896975744546683E-5 0.7362980490173877 3.6635161191274693E-4 31 6.869092723364006E-5 0.0 2.2896975744546683E-5 1.467215308734807 3.6635161191274693E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 7420 0.0 17.128706 37 AACGCAG 21925 0.0 16.158495 5 TATACAC 2665 0.0 15.89681 37 TATACCG 220 1.8189894E-11 14.295454 5 GTACTAG 325 0.0 14.23077 1 ACGCAGA 24965 0.0 14.183456 6 CGCAGAG 25055 0.0 14.147276 7 GGACCGT 290 0.0 14.034483 6 AGAGTAC 25830 0.0 13.629694 10 CAGAGTA 26350 0.0 13.451992 9 GCAGAGT 26675 0.0 13.322774 8 TAGACAG 670 0.0 12.977612 5 TAGAGAG 1255 0.0 12.972113 5 GGGTAAG 1130 0.0 12.933627 1 GAGTACT 18010 0.0 12.881178 11 ATACCGA 275 3.6379788E-12 12.781818 6 GTCTTAG 745 0.0 12.66443 1 TATTCCG 190 1.0480835E-7 12.657895 5 GTATAAG 645 0.0 12.620155 1 GTATTAA 865 0.0 12.618498 1 >>END_MODULE