##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727318.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3710104 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34887243053025 33.0 31.0 34.0 31.0 34.0 2 32.49470877366241 34.0 31.0 34.0 31.0 34.0 3 32.5854711889478 34.0 31.0 34.0 31.0 34.0 4 36.111115214020955 37.0 35.0 37.0 35.0 37.0 5 35.92319514493394 37.0 35.0 37.0 35.0 37.0 6 35.941214046829955 37.0 35.0 37.0 35.0 37.0 7 35.91208817866022 37.0 35.0 37.0 35.0 37.0 8 35.8654156325537 37.0 35.0 37.0 35.0 37.0 9 37.70125635292165 39.0 37.0 39.0 35.0 39.0 10 37.52407964844112 39.0 37.0 39.0 35.0 39.0 11 37.63355393811063 39.0 37.0 39.0 35.0 39.0 12 37.558801047086554 39.0 37.0 39.0 35.0 39.0 13 37.63452426131451 39.0 37.0 39.0 35.0 39.0 14 38.86625765746729 40.0 38.0 41.0 36.0 41.0 15 38.7928640275313 40.0 38.0 41.0 35.0 41.0 16 38.75940593579048 40.0 38.0 41.0 35.0 41.0 17 38.71484788566574 40.0 38.0 41.0 35.0 41.0 18 38.68317572768849 40.0 38.0 41.0 35.0 41.0 19 38.744845427513624 40.0 38.0 41.0 35.0 41.0 20 38.702543378837895 40.0 38.0 41.0 34.0 41.0 21 38.660215185342516 40.0 38.0 41.0 34.0 41.0 22 38.620207411975514 40.0 38.0 41.0 34.0 41.0 23 38.55227966655382 40.0 38.0 41.0 34.0 41.0 24 38.51243927393949 40.0 38.0 41.0 34.0 41.0 25 38.404882181200314 40.0 38.0 41.0 34.0 41.0 26 38.303386913143136 40.0 38.0 41.0 34.0 41.0 27 38.21507672022132 40.0 38.0 41.0 34.0 41.0 28 38.13051493974293 40.0 38.0 41.0 34.0 41.0 29 38.046352069915024 40.0 38.0 41.0 33.0 41.0 30 37.98459881448067 40.0 37.0 41.0 33.0 41.0 31 37.87871768554197 40.0 37.0 41.0 33.0 41.0 32 37.787472264928425 40.0 37.0 41.0 33.0 41.0 33 37.696679661810016 40.0 37.0 41.0 33.0 41.0 34 37.60259928023581 40.0 37.0 41.0 33.0 41.0 35 37.5429090397466 40.0 37.0 41.0 33.0 41.0 36 37.44785159661293 40.0 37.0 41.0 32.0 41.0 37 37.37702528015387 40.0 37.0 41.0 32.0 41.0 38 37.28378449768524 40.0 36.0 41.0 32.0 41.0 39 37.16788100818737 39.0 36.0 41.0 31.0 41.0 40 37.066719693032866 39.0 36.0 41.0 31.0 41.0 41 36.95555434564638 39.0 36.0 41.0 31.0 41.0 42 36.85351488799236 39.0 36.0 41.0 31.0 41.0 43 35.21326059862473 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 13.0 12 10.0 13 10.0 14 9.0 15 9.0 16 19.0 17 35.0 18 84.0 19 163.0 20 377.0 21 725.0 22 1433.0 23 2744.0 24 4690.0 25 7507.0 26 11720.0 27 17368.0 28 25382.0 29 36224.0 30 49358.0 31 64594.0 32 84757.0 33 110307.0 34 150813.0 35 208628.0 36 310182.0 37 522471.0 38 1018051.0 39 1082414.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.42174774615483 18.633143437488545 12.514420080946516 25.43068873541011 2 16.503607446044636 21.35613988179307 37.66678777737767 24.473464894784623 3 17.91049523140052 23.28902370391773 31.73425866229087 27.066222402390878 4 12.701827226406593 15.461965486681775 37.14068392691957 34.695523359992066 5 13.19704245487458 38.49115819933889 35.560674309938484 12.751125035848052 6 33.36984623611629 38.00351688254561 15.164561424693215 13.46207545664488 7 28.479579009105944 32.0421745589881 21.76761082708194 17.710635604824017 8 26.948651574187675 37.141923784346744 19.468025694158438 16.441398947307135 9 26.84593208168828 13.324100887737918 19.244474009353915 40.58549302121989 10 14.275529742562473 28.385107263839505 35.167585598678635 22.17177739491939 11 36.414046614326715 21.785346178975036 22.427538419408187 19.37306878729006 12 20.151429717334068 25.840731149315495 32.300900459933196 21.70693867341724 13 31.099613380110096 19.83712585954464 25.45869334121092 23.60456741913434 14 20.83421381179611 19.969197628961343 28.33831612267473 30.85827243656782 15 24.60548275735667 29.101340555413003 23.07134786518114 23.221828822049194 16 23.005231120205792 27.560575121344304 25.464515280434185 23.96967847801571 17 22.83628706904173 27.25397994234124 26.9124800814209 22.997252907196135 18 22.785506821372124 26.77676959998965 27.710894357678384 22.726829220959843 19 24.128191554738088 26.339180788463075 27.692323449693056 21.840304207105785 20 23.306300847631224 26.319370023050563 27.612083111416823 22.762246017901386 21 22.98558207532727 26.527450443437704 28.041127688064808 22.44583979317022 22 23.495594732654396 25.831297451500014 27.326861996321394 23.346245819524196 23 22.754699059649003 26.140480159046753 27.883396260589997 23.221424520714244 24 22.68451234790184 25.979649088004003 27.994040059254406 23.341798504839755 25 23.13749156357881 25.90792603118403 27.678954552217405 23.275627853019753 26 22.66082028967382 26.078622054799546 28.12093677158376 23.139620883942875 27 23.206384511054136 26.6413286527817 27.57844524034906 22.573841595815104 28 22.925610710643152 26.80334567440697 27.186488572827066 23.08455504212281 29 22.62602342144587 26.89436738161518 27.751540118551933 22.72806907838702 30 23.41198521658692 26.649980701349612 27.249829115302425 22.688204966761038 31 22.96765804947786 26.330528739895158 27.63011495095555 23.07169825967143 32 22.44945155176243 26.79428932450411 27.59849858656253 23.157760537170926 33 22.776207890668292 26.15630181795443 27.73167544629477 23.33581484508251 34 22.971997550472977 26.016952624508637 28.38750611842687 22.623543706591516 35 22.87545039168713 26.143471988925377 27.81593184449816 23.16514577488933 36 22.66502502355729 26.04220798123179 28.118807451219695 23.173959543991216 37 22.442443661956645 25.852779329096975 28.177053796874695 23.527723212071685 38 22.671736425717445 25.69008847191346 28.291740608888595 23.346434493480505 39 22.065796538318065 25.6386343886856 28.944175149807123 23.351393923189214 40 22.594326196785858 25.33427634373592 28.998917550559227 23.072479908918993 41 22.047980326157973 25.423007010046078 29.10646170565569 23.422550958140256 42 21.764322509557683 25.479501383249637 29.159425180534022 23.59675092665866 43 21.38034405504536 25.052640033810373 28.968891438083677 24.598124473060594 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 998.0 1 1112.5 2 1227.0 3 3649.5 4 6072.0 5 6072.0 6 7369.0 7 8666.0 8 7587.0 9 6508.0 10 8654.0 11 10800.0 12 10800.0 13 16659.0 14 22518.0 15 36993.5 16 51469.0 17 42042.0 18 32615.0 19 32615.0 20 36464.0 21 40313.0 22 36531.5 23 32750.0 24 39764.0 25 46778.0 26 46778.0 27 55893.5 28 65009.0 29 74663.5 30 84318.0 31 95890.0 32 107462.0 33 107462.0 34 121600.5 35 135739.0 36 151104.0 37 166469.0 38 184406.5 39 202344.0 40 202344.0 41 218478.0 42 234612.0 43 249208.5 44 263805.0 45 279260.5 46 294716.0 47 294716.0 48 305717.5 49 316719.0 50 317325.5 51 317932.0 52 306632.5 53 295333.0 54 295333.0 55 274571.0 56 253809.0 57 231404.0 58 208999.0 59 188731.5 60 168464.0 61 168464.0 62 145344.0 63 122224.0 64 101581.5 65 80939.0 66 66026.0 67 51113.0 68 51113.0 69 41317.0 70 31521.0 71 25482.5 72 19444.0 73 15708.0 74 11972.0 75 11972.0 76 9596.0 77 7220.0 78 5664.5 79 4109.0 80 3338.0 81 2567.0 82 2567.0 83 1959.5 84 1352.0 85 1002.5 86 653.0 87 508.0 88 363.0 89 363.0 90 240.0 91 117.0 92 75.0 93 33.0 94 31.0 95 29.0 96 29.0 97 15.0 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3710104.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.57739649614265 #Duplication Level Percentage of deduplicated Percentage of total 1 85.16707074012912 54.998676956003465 2 8.253717935712848 10.660072314037052 3 2.482458664548322 4.809321523974653 4 1.1708263310552507 3.0243566483471556 5 0.6795320653370187 2.1941205807555684 6 0.44474348593861607 1.7232225858320787 7 0.3091633376773384 1.3975474407482222 8 0.22993644942229507 1.1878957810607038 9 0.18396310488952913 1.069187252860134 >10 0.9979176901775019 11.513539695403631 >50 0.05692137594871267 2.4749280417666895 >100 0.02245610577762569 2.464918799730136 >500 8.757090732461848E-4 0.3863511270322916 >1k 2.502025874793066E-4 0.36601968602032353 >5k 4.1700431246550775E-5 0.20824236550876632 >10k+ 1.2510129373965233E-4 1.5215992009190913 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31043 0.8367150893883297 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13311 0.35877700463383233 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12150 0.32748408130877193 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7733 0.20843081487742662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6953422329940077E-5 2 2.6953422329940077E-5 0.0 0.0 0.0 2.6953422329940077E-5 3 2.6953422329940077E-5 0.0 0.0 0.0 2.6953422329940077E-5 4 2.6953422329940077E-5 0.0 0.0 0.0 2.6953422329940077E-5 5 2.6953422329940077E-5 0.0 0.0 0.0 5.3906844659880154E-5 6 2.6953422329940077E-5 0.0 0.0 0.0 5.3906844659880154E-5 7 2.6953422329940077E-5 0.0 0.0 0.0 5.3906844659880154E-5 8 2.6953422329940077E-5 0.0 0.0 0.0 5.3906844659880154E-5 9 2.6953422329940077E-5 0.0 0.0 8.086026698982023E-5 5.3906844659880154E-5 10 2.6953422329940077E-5 0.0 0.0 1.3476711164970038E-4 8.086026698982023E-5 11 2.6953422329940077E-5 0.0 0.0 1.8867395630958053E-4 8.086026698982023E-5 12 2.6953422329940077E-5 0.0 0.0 2.425808009694607E-4 8.086026698982023E-5 13 2.6953422329940077E-5 0.0 0.0 3.7734791261916106E-4 8.086026698982023E-5 14 2.6953422329940077E-5 0.0 0.0 4.851616019389214E-4 1.0781368931976031E-4 15 2.6953422329940077E-5 0.0 0.0 7.00788980578442E-4 1.3476711164970038E-4 16 2.6953422329940077E-5 0.0 0.0 0.001051183470867663 1.6172053397964047E-4 17 2.6953422329940077E-5 0.0 0.0 0.0012937642718371238 1.6172053397964047E-4 18 2.6953422329940077E-5 0.0 0.0 0.0014285313834868241 1.6172053397964047E-4 19 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.0018597861407658653 1.6172053397964047E-4 20 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.002776202499983828 1.8867395630958053E-4 21 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.004447314684440113 2.425808009694607E-4 22 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.006549681626175439 2.425808009694607E-4 23 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.008301654077621543 3.50394490289221E-4 24 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.011212623689255073 4.3125475727904123E-4 25 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.012479434538762256 4.3125475727904123E-4 26 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.014312267257198181 4.3125475727904123E-4 27 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.021697504975601762 4.3125475727904123E-4 28 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.07520004830053281 4.3125475727904123E-4 29 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.1737148069164638 4.3125475727904123E-4 30 2.6953422329940077E-5 2.6953422329940077E-5 0.0 0.2916360296099516 4.3125475727904123E-4 31 5.3906844659880154E-5 2.6953422329940077E-5 0.0 0.6864228064765839 4.3125475727904123E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3325 0.0 17.081203 37 AACGCAG 12725 0.0 16.108448 5 CCGCTAG 70 0.002593954 15.857142 36 ACGGATG 1080 0.0 15.759259 28 TACGGAT 1130 0.0 15.38938 27 GAGTGTC 1305 0.0 15.026819 7 GGAGTGT 1505 0.0 14.873754 6 TTAGACT 595 0.0 14.613445 4 GGTATCA 7480 0.0 14.592245 1 CGGATGG 1235 0.0 14.530365 29 ACGCAGA 14320 0.0 14.443437 6 CGCAGAG 14415 0.0 14.284079 7 TGTTACG 480 0.0 14.260416 24 TTACGGA 1315 0.0 14.068441 26 GGACCGT 360 0.0 13.875 6 TATACTG 615 0.0 13.837399 5 TCTATAC 605 0.0 13.760331 3 AGAGTAC 15100 0.0 13.599338 10 GTTACGG 1015 0.0 13.487685 25 CAGAGTA 15435 0.0 13.41205 9 >>END_MODULE