##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727317.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3394513 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23852611552821 33.0 31.0 34.0 30.0 34.0 2 32.36773758120826 34.0 31.0 34.0 30.0 34.0 3 32.46126587230628 34.0 31.0 34.0 30.0 34.0 4 36.00948530761261 37.0 35.0 37.0 35.0 37.0 5 35.81736054626982 37.0 35.0 37.0 35.0 37.0 6 35.84793400408247 37.0 35.0 37.0 35.0 37.0 7 35.80944070622207 37.0 35.0 37.0 35.0 37.0 8 35.76751422074389 37.0 35.0 37.0 35.0 37.0 9 37.59777116776397 39.0 37.0 39.0 35.0 39.0 10 37.43320853388984 39.0 37.0 39.0 35.0 39.0 11 37.54872466241844 39.0 37.0 39.0 35.0 39.0 12 37.47091291151337 39.0 37.0 39.0 35.0 39.0 13 37.55524223946115 39.0 37.0 39.0 35.0 39.0 14 38.70006036211969 40.0 38.0 41.0 35.0 41.0 15 38.629974903616514 40.0 38.0 41.0 34.0 41.0 16 38.595407942170205 40.0 38.0 41.0 34.0 41.0 17 38.55978221323648 40.0 38.0 41.0 34.0 41.0 18 38.559486147202854 40.0 38.0 41.0 34.0 41.0 19 38.625288517086254 40.0 38.0 41.0 34.0 41.0 20 38.59506650880406 40.0 38.0 41.0 34.0 41.0 21 38.54742138268435 40.0 38.0 41.0 34.0 41.0 22 38.50658931045484 40.0 38.0 41.0 34.0 41.0 23 38.42387523630047 40.0 38.0 41.0 34.0 41.0 24 38.387034016367004 40.0 38.0 41.0 34.0 41.0 25 38.26403286715944 40.0 38.0 41.0 34.0 41.0 26 38.1293298920935 40.0 37.0 41.0 34.0 41.0 27 38.021978115859326 40.0 37.0 41.0 33.0 41.0 28 37.90357144014473 40.0 37.0 41.0 33.0 41.0 29 37.772790677189924 40.0 37.0 41.0 33.0 41.0 30 37.664069632374364 40.0 37.0 41.0 33.0 41.0 31 37.514822892120314 39.0 36.0 41.0 33.0 41.0 32 37.38495742982867 39.0 36.0 41.0 33.0 41.0 33 37.24152212703265 39.0 36.0 41.0 32.0 41.0 34 37.10220405695898 39.0 35.0 41.0 31.0 41.0 35 36.98221571106076 39.0 35.0 41.0 31.0 41.0 36 36.8418553707115 39.0 35.0 41.0 31.0 41.0 37 36.70975689296226 39.0 35.0 41.0 31.0 41.0 38 36.572913404662174 39.0 35.0 41.0 30.0 41.0 39 36.417340572859786 39.0 35.0 40.0 30.0 41.0 40 36.24049281885207 39.0 35.0 40.0 30.0 41.0 41 36.06880987051751 39.0 35.0 40.0 29.0 41.0 42 35.88207027046295 39.0 35.0 40.0 28.0 41.0 43 34.238522875004456 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 13.0 11 17.0 12 15.0 13 9.0 14 7.0 15 9.0 16 10.0 17 28.0 18 93.0 19 195.0 20 445.0 21 927.0 22 1840.0 23 3179.0 24 5534.0 25 9065.0 26 14278.0 27 21466.0 28 31406.0 29 43038.0 30 56261.0 31 70261.0 32 89349.0 33 116097.0 34 153627.0 35 209381.0 36 308951.0 37 522130.0 38 890878.0 39 845998.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.54317511819811 16.71948229392552 12.998506707736867 24.738835880139508 2 16.288345338491855 22.34712313666202 36.18130200120017 25.183229523645956 3 19.076197380890868 23.42562835964982 30.93401026892517 26.564163990534134 4 13.264023440181258 14.650702471900976 34.35208526230419 37.733188825613574 5 14.577643390966537 38.00960550158447 33.74439868104792 13.668352426401079 6 35.42923535717789 35.245350363955005 14.517929376025368 14.807484902841733 7 29.18312582688592 30.91506793463451 21.38100516922457 18.520801069255 8 29.037096042937527 35.51204546867253 19.07817115444837 16.372687333941567 9 26.933230186480355 13.595381723387126 18.58296020666293 40.88842788346959 10 14.94709255790153 28.53652350130932 33.713083437889324 22.803300502899827 11 36.27162423593605 21.604247796370203 21.250912870270344 20.8732150974234 12 20.976764560925236 25.852014707264342 31.37622392372632 21.794996808084104 13 32.494175158557354 18.58107481102591 25.082537612906474 23.842212417510257 14 21.56704069184593 19.54353982441664 28.82009878883952 30.06932069489791 15 25.50003490927859 28.164570293293913 23.292501752092274 23.042893045335223 16 23.205272744573374 25.84956958479758 25.892256120391938 25.052901550237106 17 23.104757589674865 26.64455843886884 27.563512056074025 22.687171915382265 18 22.88027767164244 25.378927698907027 28.531957308750915 23.20883732069961 19 23.921752545946944 26.178335449002553 28.351283379972326 21.548628625078177 20 22.918103421610112 25.95915820619924 28.25886953445163 22.86386883773902 21 22.261985739927937 26.801399788423257 28.527184901044716 22.40942957060409 22 23.03370174160476 25.95049716999169 27.555911554912292 23.459889533491253 23 22.283255359458042 25.867598680576563 28.21774434211918 23.631401617846212 24 22.368952483021864 25.777924550590907 28.492305081759888 23.360817884627338 25 22.86920097227496 25.73417747995073 27.987902830243982 23.40871871753032 26 22.50679257967196 26.094582639689406 28.799477274059637 22.599147506579 27 23.287994478147528 26.549522715040418 28.199950920794826 21.962531886017228 28 22.755753181678788 27.019398658953435 27.87256964401079 22.35227851535699 29 22.417471961368243 26.949403345929152 28.551341532644003 22.081783160058603 30 22.56694848421556 26.845117399756607 28.342740180992088 22.245193935035747 31 22.290031000028577 26.30598262549002 28.44210642292429 22.961879951557115 32 21.79676436649381 26.779216930381473 28.339853168922907 23.084165534201816 33 22.412493338514246 26.259584217235286 28.168782974170377 23.1591394700801 34 22.73224465482972 26.52630878125964 28.473510044003365 22.267936519907273 35 22.424895706689004 26.585286313530098 28.315343025641678 22.674474954139225 36 22.180000489024494 26.320034714847168 28.654773158918523 22.845191637209812 37 21.628728480344602 26.099620181157064 28.803601577015613 23.468049761482725 38 21.99311064650511 25.900652022838035 28.974436097313514 23.131801233343342 39 21.521408225568734 25.90739820410174 29.4249867359471 23.14620683438243 40 22.116898653798057 25.753738459684794 29.462841945221598 22.666520941295556 41 21.647494058794294 25.588589585604772 29.574433799487586 23.18948255611335 42 20.971402967082465 25.91175818151234 29.630759994143492 23.486078857261706 43 20.715489968664137 25.404675133075056 29.518195982752164 24.361638915508646 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 211.0 1 467.5 2 724.0 3 4651.0 4 8578.0 5 8578.0 6 11704.0 7 14830.0 8 13521.0 9 12212.0 10 15415.5 11 18619.0 12 18619.0 13 30441.0 14 42263.0 15 69167.0 16 96071.0 17 74767.5 18 53464.0 19 53464.0 20 54933.0 21 56402.0 22 41530.5 23 26659.0 24 29837.0 25 33015.0 26 33015.0 27 38965.0 28 44915.0 29 51237.5 30 57560.0 31 63785.0 32 70010.0 33 70010.0 34 77858.5 35 85707.0 36 98591.5 37 111476.0 38 125965.5 39 140455.0 40 140455.0 41 156662.0 42 172869.0 43 189420.0 44 205971.0 45 226784.0 46 247597.0 47 247597.0 48 268782.5 49 289968.0 50 298692.5 51 307417.0 52 306894.0 53 306371.0 54 306371.0 55 282016.5 56 257662.0 57 230418.5 58 203175.0 59 187080.0 60 170985.0 61 170985.0 62 148739.5 63 126494.0 64 106436.5 65 86379.0 66 71380.0 67 56381.0 68 56381.0 69 45870.0 70 35359.0 71 28752.5 72 22146.0 73 18046.5 74 13947.0 75 13947.0 76 11158.5 77 8370.0 78 6660.5 79 4951.0 80 3886.0 81 2821.0 82 2821.0 83 2089.0 84 1357.0 85 1014.5 86 672.0 87 485.5 88 299.0 89 299.0 90 203.0 91 107.0 92 67.0 93 27.0 94 18.5 95 10.0 96 10.0 97 7.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3394513.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.084291408443676 #Duplication Level Percentage of deduplicated Percentage of total 1 80.69998072338572 42.83901293375995 2 10.125113116935031 10.749689104856694 3 3.3046786613228027 5.262795752067755 4 1.635896316307546 3.4736158707547733 5 0.9604497138735534 2.5492396247210025 6 0.6137115897620297 1.9547066923000092 7 0.4637718478320647 1.7233299942144806 8 0.3145035145078866 1.3356156970493078 9 0.2455565464910633 1.1731675744064383 >10 1.4979092446353839 14.527679874591035 >50 0.0904414564316691 3.2519865247836948 >100 0.04223550026274104 4.135869929475579 >500 0.003484244231077585 1.31796239525524 >1k 0.001935691237912563 1.9966725128530767 >5k 1.1061092788071788E-4 0.39431419673768076 >10k+ 2.2122185576143577E-4 3.3143413221733495 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 57124 1.6828334432656467 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20739 0.6109565643142331 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20364 0.5999093242535822 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14665 0.43202073463851814 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 7361 0.21684995756386852 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6070 0.1788179924484013 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4609 0.1357779451721057 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 4567 0.1345406542853128 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4345 0.12800068816940752 No Hit GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 4060 0.11960478572331289 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.891861365680438E-5 2 0.0 0.0 0.0 2.945930682840219E-5 5.891861365680438E-5 3 0.0 0.0 0.0 2.945930682840219E-5 5.891861365680438E-5 4 0.0 0.0 0.0 8.837792048520657E-5 5.891861365680438E-5 5 0.0 0.0 0.0 1.1783722731360876E-4 5.891861365680438E-5 6 0.0 0.0 0.0 1.1783722731360876E-4 5.891861365680438E-5 7 2.945930682840219E-5 0.0 0.0 1.4729653414201094E-4 5.891861365680438E-5 8 5.891861365680438E-5 0.0 0.0 1.4729653414201094E-4 5.891861365680438E-5 9 8.837792048520657E-5 0.0 0.0 2.3567445462721753E-4 1.1783722731360876E-4 10 1.1783722731360876E-4 0.0 0.0 2.3567445462721753E-4 1.1783722731360876E-4 11 1.1783722731360876E-4 0.0 0.0 3.535116819408263E-4 1.1783722731360876E-4 12 1.4729653414201094E-4 0.0 0.0 4.4188960242603283E-4 1.1783722731360876E-4 13 1.4729653414201094E-4 0.0 0.0 5.008082160828372E-4 1.1783722731360876E-4 14 2.0621514779881533E-4 0.0 0.0 7.364826707100548E-4 1.4729653414201094E-4 15 2.0621514779881533E-4 0.0 0.0 9.721571253372722E-4 1.7675584097041314E-4 16 2.3567445462721753E-4 0.0 0.0 0.0016202618755621204 2.0621514779881533E-4 17 2.3567445462721753E-4 0.0 0.0 0.002179988705301762 2.0621514779881533E-4 18 2.3567445462721753E-4 0.0 0.0 0.002621878307727795 2.0621514779881533E-4 19 2.3567445462721753E-4 0.0 0.0 0.003711872660378676 2.0621514779881533E-4 20 2.3567445462721753E-4 0.0 0.0 0.005715105524710024 2.0621514779881533E-4 21 2.945930682840219E-4 0.0 0.0 0.00927968165094669 2.0621514779881533E-4 22 2.945930682840219E-4 0.0 0.0 0.014552897573230682 2.3567445462721753E-4 23 2.945930682840219E-4 0.0 0.0 0.01814693300629575 3.535116819408263E-4 24 3.2405237511242405E-4 0.0 0.0 0.025629596940709903 3.535116819408263E-4 25 3.2405237511242405E-4 0.0 0.0 0.03152145830639034 3.535116819408263E-4 26 3.2405237511242405E-4 0.0 0.0 0.039387093229573726 3.535116819408263E-4 27 3.2405237511242405E-4 0.0 0.0 0.0524964847682127 3.535116819408263E-4 28 3.8297098876922844E-4 2.945930682840219E-5 0.0 0.13168310152295779 3.535116819408263E-4 29 3.8297098876922844E-4 2.945930682840219E-5 0.0 0.2974800803532053 3.535116819408263E-4 30 3.8297098876922844E-4 2.945930682840219E-5 0.0 0.5021338848901153 3.535116819408263E-4 31 3.8297098876922844E-4 2.945930682840219E-5 0.0 0.9889489302294615 3.535116819408263E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGGT 775 0.0 20.051615 11 TCGCGTG 50 0.007037643 18.5 11 CGGTGAT 825 0.0 18.38788 14 CGCCTTA 720 0.0 16.958334 25 TATACTG 525 0.0 16.914286 5 CTTATAC 3695 0.0 16.672531 37 GTCGGTG 990 0.0 16.631313 12 TCGGTGA 955 0.0 16.46597 13 TACGGAT 1075 0.0 16.004652 27 ACGGATG 1180 0.0 15.991526 28 CTCGCCT 855 0.0 15.795321 23 TAGTACT 295 0.0 15.677966 4 GTTACGG 810 0.0 15.530864 25 TCGGTAA 205 5.456968E-12 15.341464 22 CGGTAAT 200 6.184564E-11 14.8 23 TTACGGA 1210 0.0 14.677686 26 TCGCCTT 950 0.0 14.605263 24 GTGATTC 1070 0.0 14.523364 16 ATGGTTG 2055 0.0 14.223845 32 TATACAC 1340 0.0 14.220149 37 >>END_MODULE