##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727315.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1906433 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38246190660779 33.0 31.0 34.0 31.0 34.0 2 32.506665065071786 34.0 31.0 34.0 31.0 34.0 3 32.60461448159993 34.0 31.0 34.0 31.0 34.0 4 36.118600024233736 37.0 35.0 37.0 35.0 37.0 5 35.94139054454051 37.0 35.0 37.0 35.0 37.0 6 35.974894475704104 37.0 35.0 37.0 35.0 37.0 7 35.93763588859404 37.0 35.0 37.0 35.0 37.0 8 35.89783957789233 37.0 35.0 37.0 35.0 37.0 9 37.73945478283265 39.0 37.0 39.0 35.0 39.0 10 37.59032811538617 39.0 37.0 39.0 35.0 39.0 11 37.69182761733562 39.0 37.0 39.0 35.0 39.0 12 37.626204015562045 39.0 37.0 39.0 35.0 39.0 13 37.70598127497793 39.0 37.0 39.0 35.0 39.0 14 38.904399472732585 40.0 38.0 41.0 36.0 41.0 15 38.842356904229 40.0 38.0 41.0 35.0 41.0 16 38.811643000304755 40.0 38.0 41.0 35.0 41.0 17 38.77022218981732 40.0 38.0 41.0 35.0 41.0 18 38.769154226768 40.0 38.0 41.0 35.0 41.0 19 38.82374413367792 40.0 38.0 41.0 35.0 41.0 20 38.79370216524787 40.0 38.0 41.0 35.0 41.0 21 38.75401600790586 40.0 38.0 41.0 35.0 41.0 22 38.70144138293871 40.0 38.0 41.0 35.0 41.0 23 38.626891687250485 40.0 38.0 41.0 34.0 41.0 24 38.58727267100391 40.0 38.0 41.0 34.0 41.0 25 38.46873716516657 40.0 38.0 41.0 34.0 41.0 26 38.3475553559973 40.0 38.0 41.0 34.0 41.0 27 38.24245646188458 40.0 38.0 41.0 34.0 41.0 28 38.13262516962306 40.0 38.0 41.0 34.0 41.0 29 38.01309775900858 40.0 37.0 41.0 33.0 41.0 30 37.905083997182174 40.0 37.0 41.0 33.0 41.0 31 37.770073745051626 40.0 37.0 41.0 33.0 41.0 32 37.64652363864872 40.0 36.0 41.0 33.0 41.0 33 37.50768162321991 40.0 36.0 41.0 33.0 41.0 34 37.369422371517906 40.0 36.0 41.0 33.0 41.0 35 37.24918683216247 39.0 36.0 41.0 32.0 41.0 36 37.109834964040175 39.0 36.0 41.0 32.0 41.0 37 36.97866644146424 39.0 35.0 41.0 31.0 41.0 38 36.841355033195505 39.0 35.0 41.0 31.0 41.0 39 36.68662208427991 39.0 35.0 41.0 31.0 41.0 40 36.50547593332679 39.0 35.0 41.0 30.0 41.0 41 36.34037912688251 39.0 35.0 41.0 30.0 41.0 42 36.15730896391324 39.0 35.0 41.0 29.0 41.0 43 34.53529864411705 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 4.0 10 3.0 11 5.0 12 3.0 13 1.0 14 2.0 15 2.0 16 16.0 17 18.0 18 25.0 19 102.0 20 172.0 21 390.0 22 820.0 23 1452.0 24 2539.0 25 4263.0 26 6611.0 27 10246.0 28 15021.0 29 20972.0 30 27570.0 31 35183.0 32 44667.0 33 58825.0 34 79159.0 35 110431.0 36 164368.0 37 281884.0 38 500543.0 39 541135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.40914891842514 17.187438530491235 13.003184481175053 24.400228069908568 2 15.986924271663364 22.5736230961172 36.78025925904556 24.659193373173878 3 18.802129421805013 23.953110337473177 30.932637024222725 26.312123216499085 4 13.155563295431834 15.02570507329657 34.9769438527344 36.841787778537196 5 14.446508217178364 37.908911564161976 34.1723522410701 13.472227977589563 6 34.614539299309236 35.838710303483 14.945975022463417 14.600775374744352 7 28.709637317440478 30.96799100728953 21.945119498036387 18.377252177233608 8 28.1319616267658 36.01700138426055 19.516237916569846 16.3347990724038 9 26.20417292398946 14.08698863269782 19.13715299724669 40.57168544606603 10 14.878886381005785 28.584691935147998 34.10641758719032 22.4300040966559 11 35.5784336506974 22.09839002996696 21.706034253498547 20.61714206583709 12 20.587138388813035 26.264442547941623 31.753751639842577 21.394667423402762 13 31.90424211079015 19.05343644387188 25.35090401813229 23.69141742720568 14 21.2447014922633 20.082898271274154 28.92375446711214 29.748645769350407 15 24.873258068864736 28.716141611061076 23.41828954912132 22.992310770952873 16 22.977518748364094 26.39762320522148 26.000599024460865 24.624259021953566 17 22.699407742102657 27.481532264705866 27.763839589432198 22.05522040375927 18 22.68561234514929 25.96571712722136 28.437925696838022 22.910744830791327 19 23.514752419833272 27.02025195745143 28.238443207812708 21.226552414902596 20 22.6605393423215 27.023504104261733 28.0417932337512 22.274163319665576 21 22.03219310618312 27.718152172145572 28.002400294161923 22.247254427509386 22 22.641026461459703 26.973305644625327 27.463330733364348 22.922337160550622 23 22.01755844553677 26.784051681858212 27.85657822750655 23.341811645098463 24 22.20261608983898 26.75488726852714 28.15981469057659 22.882681951057286 25 22.535016966240093 26.833410877801633 27.7326819248303 22.898890231127975 26 22.2277940006284 27.22487493659625 28.431578765159855 22.115752297615497 27 22.761985341210522 27.560475505826847 28.0176119485972 21.65992720436543 28 22.51492709158937 27.793895720437067 27.771602778592268 21.91957440938129 29 21.963898023166823 27.869796630670997 28.2900054709502 21.87629987521198 30 21.89387195878376 27.863187429088775 28.352320800154008 21.890619811973462 31 21.814509085816287 27.224717574653816 28.220031860547945 22.740741478981953 32 21.460706985244173 27.65185034040011 28.191391987024982 22.69605068733074 33 22.00129771148527 27.32091817546171 28.004550907375187 22.67323320567783 34 22.223597682163497 27.400962950179736 28.262047499177783 22.11339186847899 35 21.925868887078646 27.538077656020434 28.1556708260925 22.380382630808427 36 21.71542351606377 27.221465427843516 28.489068328129026 22.57404272796369 37 21.31824197336072 26.87164982981306 28.48933059803308 23.32077759879314 38 21.388740123571086 26.906374365110132 28.918299253107765 22.786586258211013 39 21.06420734429167 26.744606288288125 29.37055747566266 22.82062889175754 40 21.447278766156483 26.760342482531513 29.369351034104003 22.423027717208 41 21.056286793189166 26.47231767389675 29.54664548924615 22.924750043667938 42 20.518108950065383 26.74555045994273 29.46439764733405 23.271942942657834 43 20.31909854686737 26.14421802392216 29.48999518996996 24.046688239240506 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 179.0 1 324.0 2 469.0 3 2743.5 4 5018.0 5 5018.0 6 6810.0 7 8602.0 8 7848.5 9 7095.0 10 9148.5 11 11202.0 12 11202.0 13 17975.5 14 24749.0 15 38251.5 16 51754.0 17 40722.0 18 29690.0 19 29690.0 20 30874.0 21 32058.0 22 24604.0 23 17150.0 24 19520.5 25 21891.0 26 21891.0 27 25756.5 28 29622.0 29 33386.0 30 37150.0 31 40815.5 32 44481.0 33 44481.0 34 49677.5 35 54874.0 36 62112.5 37 69351.0 38 78026.0 39 86701.0 40 86701.0 41 95704.5 42 104708.0 43 113796.0 44 122884.0 45 132494.0 46 142104.0 47 142104.0 48 152136.5 49 162169.0 50 163412.5 51 164656.0 52 163948.0 53 163240.0 54 163240.0 55 149801.5 56 136363.0 57 122451.5 58 108540.0 59 98879.5 60 89219.0 61 89219.0 62 77021.5 63 64824.0 64 54242.0 65 43660.0 66 36126.5 67 28593.0 68 28593.0 69 23154.5 70 17716.0 71 14314.5 72 10913.0 73 8694.5 74 6476.0 75 6476.0 76 5091.0 77 3706.0 78 2980.5 79 2255.0 80 1722.0 81 1189.0 82 1189.0 83 897.5 84 606.0 85 476.5 86 347.0 87 245.0 88 143.0 89 143.0 90 97.0 91 51.0 92 36.5 93 22.0 94 16.5 95 11.0 96 11.0 97 6.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1906433.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.15359015397465 #Duplication Level Percentage of deduplicated Percentage of total 1 83.3775837180535 50.154609990044996 2 9.15635447150158 11.015751883664382 3 2.813230912318669 5.076778179243282 4 1.3759535599352142 3.3107418606098102 5 0.7915775983074494 2.3808117211826945 6 0.48534195885960557 1.7517036766660763 7 0.363135062308702 1.5290714396058995 8 0.2602729378979124 1.2525081307585535 9 0.1973928149520948 1.06864978409709 >10 1.093713422225636 11.547964445859728 >50 0.05391384085169926 2.192017578591629 >100 0.026653149824745134 3.043796560721516 >500 0.003222008207793617 1.2763527273257906 >1k 0.001306219543700114 1.5387892029025036 >5k 1.7416260582668185E-4 0.8725881856600594 >10k+ 1.7416260582668185E-4 1.98786463306601 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27876 1.4622071690953733 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10073 0.5283689487120712 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9456 0.4960048425515085 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7202 0.3777735698028727 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 4313 0.22623401923907108 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3460 0.18149077360704519 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2708 0.14204538003695907 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 2413 0.1265714556976301 No Hit GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 2299 0.12059170188514362 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2234 0.11718219313241011 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.5736194243385422E-4 0.0 10 5.2453980811284736E-5 0.0 0.0 2.0981592324513895E-4 0.0 11 5.2453980811284736E-5 0.0 0.0 4.196318464902779E-4 0.0 12 5.2453980811284736E-5 0.0 0.0 7.343557313579863E-4 0.0 13 5.2453980811284736E-5 0.0 0.0 8.917176737918406E-4 0.0 14 5.2453980811284736E-5 0.0 0.0 0.0013113495202821185 0.0 15 5.2453980811284736E-5 0.0 0.0 0.001416257481904688 5.2453980811284736E-5 16 5.2453980811284736E-5 0.0 0.0 0.0020457052516401047 1.5736194243385422E-4 17 5.2453980811284736E-5 0.0 0.0 0.0027276070021868067 1.5736194243385422E-4 18 5.2453980811284736E-5 0.0 0.0 0.0030423308870545147 1.5736194243385422E-4 19 5.2453980811284736E-5 0.0 0.0 0.004720858273015626 1.5736194243385422E-4 20 5.2453980811284736E-5 0.0 0.0 0.00708128740952344 2.0981592324513895E-4 21 5.2453980811284736E-5 0.0 0.0 0.011277605874426219 2.622699040564237E-4 22 1.5736194243385422E-4 0.0 0.0 0.017204905706101396 2.622699040564237E-4 23 1.5736194243385422E-4 0.0 0.0 0.02192576397911702 2.622699040564237E-4 24 1.5736194243385422E-4 0.0 0.0 0.030056131004866156 2.622699040564237E-4 25 1.5736194243385422E-4 0.0 0.0 0.03739968831844602 2.622699040564237E-4 26 1.5736194243385422E-4 0.0 0.0 0.046002141171496716 2.622699040564237E-4 27 1.5736194243385422E-4 0.0 0.0 0.06478066630193666 2.622699040564237E-4 28 2.0981592324513895E-4 0.0 0.0 0.1835364788586853 3.1472388486770845E-4 29 2.0981592324513895E-4 0.0 0.0 0.41470117229401715 3.1472388486770845E-4 30 2.0981592324513895E-4 0.0 0.0 0.6842097257023981 3.1472388486770845E-4 31 2.0981592324513895E-4 0.0 0.0 1.2765200770234255 3.6717786567899317E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGGT 405 0.0 21.012346 11 TATACCG 70 1.2197319E-4 18.5 5 TCGGTGA 495 0.0 18.31313 13 CGGTGAT 490 0.0 17.744898 14 TCGTTAC 235 0.0 16.531914 23 GTCGGTG 520 0.0 16.365387 12 ATACCGT 125 1.6592821E-7 16.279999 6 CTTATAC 2695 0.0 15.994433 37 TATACTG 325 0.0 15.938461 5 ATACCGA 70 0.0025933334 15.857143 6 CGCCTTA 365 0.0 15.712329 25 CTCGTTA 290 0.0 15.310346 22 CGTTACG 245 0.0 15.10204 24 GTCTAGG 250 0.0 14.799999 1 GTATAAG 305 0.0 14.557377 1 CTATACT 255 0.0 14.509804 4 GGAGTGT 565 0.0 14.40708 6 TAGTACT 180 3.3342076E-9 14.388888 4 AACGCAG 11745 0.0 14.318007 5 TATACAC 995 0.0 14.316583 37 >>END_MODULE