##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727314.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4449841 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.890368891832313 31.0 31.0 34.0 30.0 34.0 2 32.051173513840155 33.0 31.0 34.0 30.0 34.0 3 32.124163537528645 34.0 31.0 34.0 30.0 34.0 4 35.79445602663107 37.0 35.0 37.0 35.0 37.0 5 35.44290998262635 37.0 35.0 37.0 33.0 37.0 6 35.44036382423552 37.0 35.0 37.0 33.0 37.0 7 35.417222323224586 37.0 35.0 37.0 33.0 37.0 8 35.351526043290086 37.0 35.0 37.0 33.0 37.0 9 37.1396094826759 39.0 37.0 39.0 33.0 39.0 10 36.872861524715155 39.0 37.0 39.0 33.0 39.0 11 37.01567224536787 39.0 37.0 39.0 33.0 39.0 12 36.904756821648235 39.0 37.0 39.0 33.0 39.0 13 37.017974799549016 39.0 37.0 39.0 33.0 39.0 14 38.10296143165565 40.0 37.0 41.0 33.0 41.0 15 37.994600031776415 40.0 37.0 41.0 33.0 41.0 16 37.959404392201876 40.0 37.0 41.0 33.0 41.0 17 37.873184457601965 40.0 37.0 41.0 33.0 41.0 18 37.82651762164086 39.0 37.0 41.0 33.0 41.0 19 37.8773513480594 40.0 37.0 41.0 33.0 41.0 20 37.821996111771185 39.0 37.0 41.0 33.0 41.0 21 37.7702902193584 39.0 37.0 41.0 33.0 41.0 22 37.72614257453244 39.0 37.0 40.0 33.0 41.0 23 37.646601979711185 39.0 37.0 40.0 32.0 41.0 24 37.587672008954925 39.0 37.0 41.0 32.0 41.0 25 37.45825255329348 39.0 37.0 40.0 32.0 41.0 26 37.315915107978014 39.0 36.0 40.0 32.0 41.0 27 37.20601095634653 39.0 36.0 40.0 31.0 41.0 28 37.092119021780775 39.0 36.0 40.0 31.0 41.0 29 36.99323234245898 39.0 36.0 40.0 31.0 41.0 30 36.91329914934039 39.0 36.0 40.0 31.0 41.0 31 36.79896090669307 39.0 36.0 40.0 31.0 41.0 32 36.68648295523368 39.0 35.0 40.0 30.0 41.0 33 36.5743169250317 38.0 35.0 40.0 30.0 41.0 34 36.4616551467794 38.0 35.0 40.0 30.0 41.0 35 36.398531992491414 38.0 35.0 40.0 30.0 41.0 36 36.29924417524132 38.0 35.0 40.0 30.0 41.0 37 36.206243324199676 38.0 35.0 40.0 30.0 41.0 38 36.09612231088706 38.0 35.0 40.0 29.0 41.0 39 35.95577797049378 38.0 35.0 40.0 29.0 41.0 40 35.83827894075316 38.0 35.0 40.0 28.0 41.0 41 35.7140230403738 38.0 35.0 40.0 28.0 41.0 42 35.60060033605695 38.0 34.0 40.0 27.0 41.0 43 33.90651171581187 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 15.0 11 13.0 12 10.0 13 15.0 14 20.0 15 19.0 16 54.0 17 103.0 18 227.0 19 452.0 20 1009.0 21 2038.0 22 3769.0 23 6584.0 24 10617.0 25 16587.0 26 24926.0 27 35660.0 28 50440.0 29 68649.0 30 89618.0 31 116082.0 32 148579.0 33 192401.0 34 256120.0 35 353167.0 36 519293.0 37 811268.0 38 1186943.0 39 555156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.7002223225504 18.409242038086305 13.272024775716707 25.618510863646588 2 16.973033418497423 20.893690358824056 37.12582090011756 25.00745532256096 3 18.43854645592955 22.512579662958743 31.360333998450727 27.68853988266098 4 13.742873059958772 15.584781568599867 35.427175937297534 35.245169434143826 5 13.909710481790249 37.71220140225235 34.83924481796091 13.53884329799649 6 34.51352531472473 36.757425714761496 14.926398493788879 13.802650476724898 7 29.123400139465655 31.619938779835056 21.14612634473906 18.11053473596023 8 27.370124011172535 36.795988890389566 19.001330609340872 16.832556489097026 9 26.893657548662976 13.536416244984933 18.469963308801372 41.099962897550725 10 14.726166620335423 28.13736490809447 34.679486300746476 22.45698217082363 11 37.06689744644809 21.201723836874173 21.894827253378267 19.836551463299475 12 20.890386870002768 25.15716853703312 31.673289000663168 22.27915559230094 13 31.36833428430364 19.449885962217525 24.93489093205802 24.24688882142081 14 21.330357646486693 19.607150008281195 27.606941461503904 31.455550883728208 15 24.831493979223076 28.550413374320566 22.650022776094698 23.96806987036166 16 23.78884998362863 26.83179016958134 24.91835101523852 24.46100883155151 17 23.560841836820686 26.79309215767485 26.254263916396113 23.391802089108353 18 23.575943500003707 26.201790131377727 26.96882877388203 23.253437594736532 19 24.65910579726332 26.0026594208647 26.982829274124626 22.355405507747356 20 23.867706733791163 25.719638072461464 27.020111505107707 23.392543688639662 21 23.470366694000976 26.04261590470311 27.369629611484996 23.117387789810916 22 24.070635332813016 25.327129665981325 26.755180690725805 23.847054310479855 23 23.323192896105727 25.645747791887395 27.243108236901048 23.78795107510583 24 23.31317006607652 25.442189956899586 27.360325908274024 23.884314068749873 25 23.750489062418183 25.353962085386872 27.066630021162553 23.82891883103239 26 23.393240342744832 25.666917087599312 27.369112739084382 23.570729830571473 27 23.869864114245882 26.053739897672752 26.795159647277284 23.28123634080409 28 23.546684027586604 26.352020218250495 26.540161772072306 23.561133982090595 29 23.346160008863237 26.397549934930257 27.03060626211139 23.225683794095115 30 23.912629687218036 26.08740402185157 26.62946833381238 23.37049795711802 31 23.58365164058671 25.6500850255099 27.093012986306704 23.67325034759669 32 23.078442578060653 26.1343045740286 27.048494541715083 23.73875830619566 33 23.288337718134198 25.52700197602566 27.119171224320148 24.065489081519992 34 23.52762716690327 25.615566938234423 27.608312297001174 23.248493597861135 35 23.45038845208177 25.52145121589738 27.23598438685787 23.792175945162985 36 23.174558371860925 25.27977965954289 27.70665288939537 23.839009079200807 37 22.970146573776457 25.10226769900318 27.7831949501117 24.144390777108665 38 23.054733865771833 24.943790126433733 27.964594690012518 24.036881317781916 39 22.618246359813753 24.964240295327407 28.54596377713271 23.871549567726127 40 23.08338657493605 24.803470506024823 28.423060509353032 23.6900824096861 41 22.4191381220138 24.835224449592694 28.71046403680491 24.0351733915886 42 22.051124972779927 25.06231121516477 28.593268838145004 24.293294973910303 43 21.748395055014324 24.60863208370816 28.482927816971436 25.160045044306077 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1649.0 1 1779.5 2 1910.0 3 4591.0 4 7272.0 5 7272.0 6 8794.5 7 10317.0 8 9550.5 9 8784.0 10 11584.5 11 14385.0 12 14385.0 13 21395.5 14 28406.0 15 45836.0 16 63266.0 17 51233.5 18 39201.0 19 39201.0 20 42539.0 21 45877.0 22 39573.0 23 33269.0 24 39002.5 25 44736.0 26 44736.0 27 53640.5 28 62545.0 29 71117.5 30 79690.0 31 91984.5 32 104279.0 33 104279.0 34 119008.0 35 133737.0 36 152632.5 37 171528.0 38 192247.0 39 212966.0 40 212966.0 41 235728.0 42 258490.0 43 280314.0 44 302138.0 45 326884.5 46 351631.0 47 351631.0 48 370402.0 49 389173.0 50 393663.0 51 398153.0 52 384636.5 53 371120.0 54 371120.0 55 350833.5 56 330547.0 57 304987.0 58 279427.0 59 255507.0 60 231587.0 61 231587.0 62 200659.5 63 169732.0 64 141893.5 65 114055.0 66 94001.0 67 73947.0 68 73947.0 69 60134.0 70 46321.0 71 37396.0 72 28471.0 73 23113.0 74 17755.0 75 17755.0 76 14116.0 77 10477.0 78 8320.5 79 6164.0 80 4809.0 81 3454.0 82 3454.0 83 2606.0 84 1758.0 85 1336.5 86 915.0 87 685.5 88 456.0 89 456.0 90 305.5 91 155.0 92 107.5 93 60.0 94 42.0 95 24.0 96 24.0 97 16.0 98 8.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4449841.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.86530500261386 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07969232877613 42.5965174680239 2 10.663116687122905 11.487440652606734 3 3.732424794194204 6.031445998157672 4 1.8000663117004754 3.878444836187052 5 1.0611461968730422 2.857948177346507 6 0.6902305619040674 2.2307687843452886 7 0.4898220868130811 1.8469091272242393 8 0.3832249665497585 1.6514023766255388 9 0.3034518932753221 1.471097590640627 >10 1.6593722803000632 16.5592069569905 >50 0.1002738567453463 3.6613353258005246 >100 0.03555176942393614 3.1975248116769204 >500 0.0012092750864960092 0.44482491707269434 >1k 2.5019474106232123E-4 0.36829892094127653 >5k 4.169912351038014E-5 0.20974418026159797 >10k+ 1.2509737053114042E-4 1.5070898760989975 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37437 0.8413109592005646 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15237 0.3424167290471727 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14423 0.324123940608215 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9338 0.20985019464740423 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.2472713069972614E-5 0.0 0.0 0.0 0.0 6 2.2472713069972614E-5 0.0 0.0 0.0 0.0 7 2.2472713069972614E-5 0.0 0.0 0.0 0.0 8 2.2472713069972614E-5 0.0 0.0 0.0 0.0 9 2.2472713069972614E-5 0.0 0.0 2.2472713069972614E-5 0.0 10 2.2472713069972614E-5 0.0 0.0 4.494542613994523E-5 0.0 11 2.2472713069972614E-5 0.0 0.0 2.471998437696987E-4 0.0 12 2.2472713069972614E-5 0.0 0.0 3.146179829796166E-4 0.0 13 2.2472713069972614E-5 0.0 0.0 3.595634091195618E-4 2.2472713069972614E-5 14 2.2472713069972614E-5 0.0 0.0 3.595634091195618E-4 6.741813920991784E-5 15 2.2472713069972614E-5 0.0 0.0 4.943996875393975E-4 1.573089914898083E-4 16 4.494542613994523E-5 0.0 0.0 7.640722443790688E-4 2.0225441762975353E-4 17 4.494542613994523E-5 0.0 0.0 9.663266620088223E-4 2.0225441762975353E-4 18 4.494542613994523E-5 0.0 0.0 0.0010786902273586855 2.0225441762975353E-4 19 4.494542613994523E-5 2.2472713069972614E-5 0.0 0.001280944644988439 2.0225441762975353E-4 20 6.741813920991784E-5 2.2472713069972614E-5 0.0 0.00206748960243748 2.471998437696987E-4 21 8.989085227989046E-5 2.2472713069972614E-5 0.0 0.0031237071167261933 2.6967255683967137E-4 22 1.1236356534986306E-4 2.2472713069972614E-5 0.0 0.0054608692760033445 2.6967255683967137E-4 23 1.1236356534986306E-4 2.2472713069972614E-5 0.0 0.006854177486341647 3.820361221895344E-4 24 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.008989085227989045 3.820361221895344E-4 25 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.010247557159907512 3.820361221895344E-4 26 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.01195548335322543 3.820361221895344E-4 27 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.025618892899768778 4.0450883525950705E-4 28 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.12231897723986093 4.0450883525950705E-4 29 1.3483627841983568E-4 2.2472713069972614E-5 0.0 0.28877436294914804 4.0450883525950705E-4 30 1.573089914898083E-4 2.2472713069972614E-5 0.0 0.4862420926949974 4.0450883525950705E-4 31 1.573089914898083E-4 2.2472713069972614E-5 0.0 0.9718549494240356 4.2698154832947964E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGGT 635 0.0 16.897638 11 AACGCAG 14530 0.0 16.615622 5 GGTATCA 8195 0.0 15.870042 1 CTTATAC 4835 0.0 15.840744 37 ACGCAGA 16325 0.0 14.879327 6 CGCAGAG 16600 0.0 14.744276 7 AGAGTAC 17145 0.0 14.135316 10 CGGTGAT 770 0.0 13.935066 14 CAGAGTA 17550 0.0 13.903989 9 TATACCG 240 5.456968E-12 13.875001 5 GGGTAAG 2130 0.0 13.809859 1 GCAGAGT 17770 0.0 13.783905 8 CAACGCA 17860 0.0 13.621221 4 TCGGTGA 835 0.0 13.51497 13 TCAACGC 18020 0.0 13.459212 3 ATCAACG 17985 0.0 13.4134 2 TATCAAC 18245 0.0 13.272952 1 TATACAC 1975 0.0 13.207594 37 GGAGTGT 1695 0.0 13.097345 6 ACCCGAC 2040 0.0 13.058823 11 >>END_MODULE