##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727313.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2920250 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31680232856776 33.0 31.0 34.0 30.0 34.0 2 32.44406917215992 34.0 31.0 34.0 31.0 34.0 3 32.53923191507577 34.0 31.0 34.0 31.0 34.0 4 36.073326941186544 37.0 35.0 37.0 35.0 37.0 5 35.8931992123962 37.0 35.0 37.0 35.0 37.0 6 35.92493759095968 37.0 35.0 37.0 35.0 37.0 7 35.88743361013612 37.0 35.0 37.0 35.0 37.0 8 35.84728704734184 37.0 35.0 37.0 35.0 37.0 9 37.678128242445 39.0 37.0 39.0 35.0 39.0 10 37.520355449019775 39.0 37.0 39.0 35.0 39.0 11 37.62973067374369 39.0 37.0 39.0 35.0 39.0 12 37.55490043660645 39.0 37.0 39.0 35.0 39.0 13 37.63729475216163 39.0 37.0 39.0 35.0 39.0 14 38.80772057186885 40.0 38.0 41.0 35.0 41.0 15 38.740221898810034 40.0 38.0 41.0 35.0 41.0 16 38.7183333618697 40.0 38.0 41.0 35.0 41.0 17 38.682903518534374 40.0 38.0 41.0 35.0 41.0 18 38.68178375139115 40.0 38.0 41.0 35.0 41.0 19 38.748830065919016 40.0 38.0 41.0 35.0 41.0 20 38.720205119424705 40.0 38.0 41.0 35.0 41.0 21 38.677818679907546 40.0 38.0 41.0 34.0 41.0 22 38.632611591473335 40.0 38.0 41.0 34.0 41.0 23 38.56163616128756 40.0 38.0 41.0 34.0 41.0 24 38.51840356133893 40.0 38.0 41.0 34.0 41.0 25 38.40318089204691 40.0 38.0 41.0 34.0 41.0 26 38.28509853608424 40.0 38.0 41.0 34.0 41.0 27 38.18194058727849 40.0 38.0 41.0 34.0 41.0 28 38.07782141939902 40.0 37.0 41.0 33.0 41.0 29 37.95269754301858 40.0 37.0 41.0 33.0 41.0 30 37.850805239277456 40.0 37.0 41.0 33.0 41.0 31 37.708655080900606 40.0 37.0 41.0 33.0 41.0 32 37.58777570413492 40.0 36.0 41.0 33.0 41.0 33 37.4572536597894 40.0 36.0 41.0 33.0 41.0 34 37.32473726564506 39.0 36.0 41.0 32.0 41.0 35 37.20912353394401 39.0 36.0 41.0 32.0 41.0 36 37.083311017892306 39.0 35.0 41.0 31.0 41.0 37 36.95342487800702 39.0 35.0 41.0 31.0 41.0 38 36.8184052735211 39.0 35.0 41.0 31.0 41.0 39 36.66949678965842 39.0 35.0 41.0 31.0 41.0 40 36.49979179864738 39.0 35.0 41.0 30.0 41.0 41 36.34167862340553 39.0 35.0 41.0 30.0 41.0 42 36.160009245783755 39.0 35.0 40.0 29.0 41.0 43 34.561459806523416 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 25.0 11 13.0 12 22.0 13 11.0 14 15.0 15 9.0 16 16.0 17 38.0 18 59.0 19 149.0 20 337.0 21 668.0 22 1256.0 23 2409.0 24 4023.0 25 6653.0 26 10589.0 27 16051.0 28 23653.0 29 33027.0 30 43334.0 31 56141.0 32 71260.0 33 93491.0 34 125444.0 35 172762.0 36 256476.0 37 437051.0 38 760148.0 39 805116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.15589418714151 17.356561938190225 13.01306395000428 24.47447992466398 2 16.049653283109322 22.57015666466912 36.68935878777502 24.690831264446537 3 18.76222926119339 23.674377193733413 31.358342607653455 26.205050937419745 4 12.745312901292696 14.97464258197072 35.466792226692924 36.813252290043664 5 14.076637274205975 38.51824330108723 34.25535484975602 13.149764574950776 6 34.41544388322917 36.53872099991439 14.723020289358788 14.322814827497647 7 28.86335074051879 31.261467340124987 21.564763290814142 18.310418628542077 8 28.570190908312643 36.09379333961134 19.031658248437633 16.304357503638386 9 26.474411437376936 13.706840167793855 18.87389778272408 40.94485061210513 10 14.583443198356305 28.981320092457835 34.241931341494734 22.19330536769112 11 35.94394315555175 22.045509802242957 21.670541905658762 20.34000513654653 12 20.698330622378222 26.456638986388153 31.798750107011386 21.04628028422224 13 32.10536769112233 19.167126102217278 25.30177210855235 23.425734098108038 14 21.197123533944012 20.073418371714748 29.159900693433784 29.56955740090746 15 24.686345347144936 29.026932625631368 23.54699083982536 22.73973118739834 16 22.783631538395685 26.54673401249893 25.99404160602688 24.675592843078505 17 22.670832976628713 27.28170533344748 27.951545244414007 22.095916445509804 18 22.55988357161202 25.7720058214194 28.835236709185857 22.832873897782726 19 23.400188340039378 26.612687269925523 28.73897782724082 21.248146562794282 20 22.59618183374711 26.61457067031932 28.60344148617413 22.18580600975944 21 22.109168735553464 27.163188083212052 28.614604913962843 22.113038267271637 22 22.54217960791028 26.61326941186542 28.028011300402362 22.816539679821936 23 22.014142624775275 26.51615443883229 28.349798818594294 23.119904117798136 24 22.082047769882713 26.44965328310932 28.69521445081757 22.773084496190393 25 22.392192449276603 26.451160003424363 28.404520160945125 22.75212738635391 26 22.109750877493365 26.78592586251177 28.925160517079018 22.179162742915846 27 22.598373426932625 27.18667922266929 28.477459121650543 21.73748822874754 28 22.3156579060012 27.39046314527866 28.4251690779899 21.868709870730246 29 21.909870730245697 27.52778015580858 28.752195873640957 21.810153240304768 30 21.86713466312816 27.606574779556546 28.67768170533345 21.84860885198185 31 21.766218645663898 27.076996832462974 28.603099049738894 22.553685472134237 32 21.35224723910624 27.55503809605342 28.5835801729304 22.509134491909936 33 21.911035014125503 27.1632565704991 28.449105384812945 22.476603030562455 34 22.21241332077733 27.13517678280969 28.663573324201696 21.988836572211284 35 21.90309048882801 27.391764403732555 28.558822018662788 22.146323088776647 36 21.740433182090573 27.02861056416403 28.766167280198612 22.464788973546785 37 21.36864994435408 26.820683160688297 28.799452101703622 23.011214793254002 38 21.422891875695573 26.768804040749938 29.206300830408356 22.602003253146137 39 21.238866535399367 26.613885797448848 29.492029791969866 22.65521787518192 40 21.44244499614759 26.573649516308535 29.690505949833064 22.293399537710812 41 21.07939388750963 26.305761493022857 29.853163256570497 22.76168136289701 42 20.55234997003681 26.525776902662447 29.88114031332934 23.040732813971406 43 20.33134149473504 26.02742915846246 29.95421624860885 23.68701309819365 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 297.0 1 482.5 2 668.0 3 3717.0 4 6766.0 5 6766.0 6 9228.5 7 11691.0 8 10545.5 9 9400.0 10 12311.5 11 15223.0 12 15223.0 13 25285.5 14 35348.0 15 58705.5 16 82063.0 17 63832.0 18 45601.0 19 45601.0 20 48778.0 21 51955.0 22 40101.0 23 28247.0 24 32844.5 25 37442.0 26 37442.0 27 44011.5 28 50581.0 29 57092.5 30 63604.0 31 69140.0 32 74676.0 33 74676.0 34 82460.0 35 90244.0 36 100672.5 37 111101.0 38 123718.5 39 136336.0 40 136336.0 41 148768.5 42 161201.0 43 173518.0 44 185835.0 45 198623.5 46 211412.0 47 211412.0 48 225062.0 49 238712.0 50 241862.0 51 245012.0 52 241826.0 53 238640.0 54 238640.0 55 221561.0 56 204482.0 57 184213.0 58 163944.0 59 149978.5 60 136013.0 61 136013.0 62 118499.0 63 100985.0 64 84296.5 65 67608.0 66 56121.0 67 44634.0 68 44634.0 69 36386.5 70 28139.0 71 22748.0 72 17357.0 73 14022.5 74 10688.0 75 10688.0 76 8505.5 77 6323.0 78 5020.5 79 3718.0 80 2912.5 81 2107.0 82 2107.0 83 1630.5 84 1154.0 85 886.5 86 619.0 87 444.5 88 270.0 89 270.0 90 180.0 91 90.0 92 62.5 93 35.0 94 28.0 95 21.0 96 21.0 97 12.0 98 3.0 99 4.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2920250.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.6317840817909 #Duplication Level Percentage of deduplicated Percentage of total 1 82.93002934485028 48.62335574443845 2 9.486101440867486 11.123741029178161 3 2.892973005549091 5.088605058474119 4 1.3252384430584785 3.108043770011738 5 0.7957319432800054 2.3327591742688583 6 0.5023283605310725 1.7671444783690715 7 0.3610902572212926 1.4819956196806015 8 0.24800848716908758 1.163294405611964 9 0.2089124951263669 1.1024021075613604 >10 1.1493763588722694 12.165507289929586 >50 0.06558204720916888 2.620801757028159 >100 0.030147253025140573 3.21760192455265 >500 0.002909456649574273 1.1958464221663694 >1k 0.0012219717927639242 1.323820514999381 >5k 1.1637826597751658E-4 0.3957268737043921 >10k+ 2.3275653195503317E-4 3.289353830025136 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 49087 1.6809177296464344 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18099 0.6197757041349199 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16879 0.5779984590360414 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12348 0.4228405102302885 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 6590 0.22566561082099135 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5009 0.17152641041006764 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3728 0.1276603030562452 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3656 0.12519476072254088 No Hit GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 3597 0.12317438575464429 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.424364352367092E-5 2 0.0 0.0 0.0 0.0 6.848728704734184E-5 3 0.0 0.0 0.0 0.0 6.848728704734184E-5 4 0.0 0.0 0.0 0.0 6.848728704734184E-5 5 0.0 0.0 0.0 0.0 6.848728704734184E-5 6 3.424364352367092E-5 0.0 0.0 0.0 6.848728704734184E-5 7 3.424364352367092E-5 0.0 0.0 3.424364352367092E-5 6.848728704734184E-5 8 3.424364352367092E-5 0.0 0.0 3.424364352367092E-5 6.848728704734184E-5 9 6.848728704734184E-5 0.0 0.0 1.0273093057101276E-4 6.848728704734184E-5 10 2.0546186114202552E-4 0.0 0.0 1.3697457409468368E-4 6.848728704734184E-5 11 2.0546186114202552E-4 0.0 0.0 1.712182176183546E-4 6.848728704734184E-5 12 2.3970550466569644E-4 0.0 0.0 2.7394914818936736E-4 1.0273093057101276E-4 13 2.3970550466569644E-4 6.848728704734184E-5 0.0 3.081927917130383E-4 1.3697457409468368E-4 14 3.081927917130383E-4 6.848728704734184E-5 0.0 4.4516736580772195E-4 2.0546186114202552E-4 15 3.081927917130383E-4 1.0273093057101276E-4 0.0 7.533601575207602E-4 2.3970550466569644E-4 16 3.081927917130383E-4 1.0273093057101276E-4 0.0 0.0011985275233284821 2.7394914818936736E-4 17 3.081927917130383E-4 1.0273093057101276E-4 0.0 0.0016436948891362041 2.7394914818936736E-4 18 3.081927917130383E-4 1.0273093057101276E-4 0.0 0.0022258368290386096 3.766800787603801E-4 19 3.766800787603801E-4 1.0273093057101276E-4 0.0 0.0036298262135091176 3.766800787603801E-4 20 3.766800787603801E-4 1.0273093057101276E-4 0.0 0.0053077647461689925 3.766800787603801E-4 21 3.766800787603801E-4 1.0273093057101276E-4 0.0 0.007704819792825957 3.766800787603801E-4 22 3.766800787603801E-4 1.0273093057101276E-4 0.0 0.011779813372142796 3.766800787603801E-4 23 3.766800787603801E-4 1.712182176183546E-4 0.0 0.01455354849756014 4.4516736580772195E-4 24 4.1092372228405103E-4 1.712182176183546E-4 0.0 0.02016950603544217 4.4516736580772195E-4 25 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.023319921239619897 4.4516736580772195E-4 26 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.028490711411694205 4.7941100933139287E-4 27 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.038284393459464085 5.136546528550637E-4 28 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.0985532060611249 5.136546528550637E-4 29 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.2352538310076192 5.136546528550637E-4 30 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.3941100933139286 5.136546528550637E-4 31 4.4516736580772195E-4 1.712182176183546E-4 0.0 0.8088006163855834 5.136546528550637E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATATCG 50 0.007037416 18.499998 4 AGTCGGT 630 0.0 17.912699 11 CGGTGAT 640 0.0 17.34375 14 TATACCG 150 2.5283953E-10 17.266666 5 CTTATAC 2770 0.0 16.22924 37 TTATGCG 80 3.384798E-4 16.1875 4 TCGGTGA 760 0.0 15.822369 13 GTCGGTG 765 0.0 14.9934635 12 CTATACT 435 0.0 14.8850565 4 AACGCAG 18490 0.0 14.7579775 5 TAGGGTG 430 0.0 14.627908 5 TAGTACT 280 0.0 14.535714 4 ATACCGA 115 2.2120395E-5 14.478261 6 TATACTG 565 0.0 14.40708 5 CTAGGAC 440 0.0 14.295454 3 GACCGTG 385 0.0 13.935064 7 TAGCGTG 80 0.0063016852 13.875001 5 GTATAGG 435 0.0 13.609195 1 GTACCGT 165 2.5990084E-7 13.454545 6 GTGATTC 840 0.0 13.434524 16 >>END_MODULE