##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727311.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3964548 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.281127886457675 33.0 31.0 34.0 30.0 34.0 2 32.42782985601385 34.0 31.0 34.0 31.0 34.0 3 32.516214963219014 34.0 31.0 34.0 31.0 34.0 4 36.0614269268527 37.0 35.0 37.0 35.0 37.0 5 35.862662527985535 37.0 35.0 37.0 35.0 37.0 6 35.876472929574824 37.0 35.0 37.0 35.0 37.0 7 35.84462037034234 37.0 35.0 37.0 35.0 37.0 8 35.79709237976183 37.0 35.0 37.0 35.0 37.0 9 37.63182763835877 39.0 37.0 39.0 35.0 39.0 10 37.44858077137671 39.0 37.0 39.0 35.0 39.0 11 37.55955256437808 39.0 37.0 39.0 35.0 39.0 12 37.480021177697935 39.0 37.0 39.0 35.0 39.0 13 37.56330860415866 39.0 37.0 39.0 35.0 39.0 14 38.76573546341222 40.0 38.0 41.0 35.0 41.0 15 38.683716781837425 40.0 38.0 41.0 35.0 41.0 16 38.65692406801482 40.0 38.0 41.0 35.0 41.0 17 38.588225442093275 40.0 38.0 41.0 34.0 41.0 18 38.56526998790278 40.0 38.0 41.0 34.0 41.0 19 38.621195657108956 40.0 38.0 41.0 34.0 41.0 20 38.59126261051701 40.0 38.0 41.0 34.0 41.0 21 38.551381141053156 40.0 38.0 41.0 34.0 41.0 22 38.51165832775893 40.0 38.0 41.0 34.0 41.0 23 38.444393408782034 40.0 38.0 41.0 34.0 41.0 24 38.40576756795478 40.0 38.0 41.0 34.0 41.0 25 38.292537005479566 40.0 38.0 41.0 34.0 41.0 26 38.18021625668298 40.0 38.0 41.0 34.0 41.0 27 38.09419131764832 40.0 38.0 41.0 33.0 41.0 28 37.9969973878485 40.0 37.0 41.0 33.0 41.0 29 37.90627758826479 40.0 37.0 41.0 33.0 41.0 30 37.83319788283557 40.0 37.0 41.0 33.0 41.0 31 37.71638582758993 40.0 37.0 41.0 33.0 41.0 32 37.62274488794183 40.0 37.0 41.0 33.0 41.0 33 37.52875636768681 40.0 37.0 41.0 33.0 41.0 34 37.43130187854958 40.0 36.0 41.0 32.0 41.0 35 37.36198300537665 39.0 36.0 41.0 32.0 41.0 36 37.266069423298696 39.0 36.0 41.0 32.0 41.0 37 37.18089023010946 39.0 36.0 41.0 31.0 41.0 38 37.090345229771465 39.0 36.0 41.0 31.0 41.0 39 36.961614035193925 39.0 36.0 41.0 31.0 41.0 40 36.85198867563213 39.0 36.0 41.0 31.0 41.0 41 36.73258717008849 39.0 35.0 40.0 30.0 41.0 42 36.62114092199161 39.0 35.0 40.0 30.0 41.0 43 34.95568473379563 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 12.0 11 11.0 12 12.0 13 12.0 14 7.0 15 13.0 16 27.0 17 36.0 18 88.0 19 214.0 20 397.0 21 910.0 22 1760.0 23 3214.0 24 5351.0 25 8925.0 26 13771.0 27 20375.0 28 30168.0 29 42458.0 30 57285.0 31 74836.0 32 96553.0 33 126418.0 34 170718.0 35 236117.0 36 347633.0 37 579484.0 38 1083410.0 39 1064332.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.174606537744026 17.552543190295587 12.911509710564737 26.36134056139565 2 16.7852173816536 20.65824401672019 36.84488118191532 25.7116574197109 3 17.924388858452463 21.920582119323566 31.539434003573675 28.615595018650296 4 13.082777658386277 15.554358277412708 35.64878013836634 35.71408392583467 5 13.483428627929337 38.2001933133361 34.95311445340049 13.363263605334074 6 33.975852985006114 36.77440656538904 15.453665840342959 13.796074609261888 7 29.717511302675614 31.658337848349927 20.71807429245402 17.90607655652044 8 28.268291870851353 36.110800020582424 18.81213192525352 16.808776183312702 9 27.653038883625573 13.232832595292074 18.116390569618527 40.997737951463826 10 14.68681927927219 28.265012808521927 34.391461523482626 22.656706388723254 11 37.410241974621066 21.254200983315123 21.577062504981654 19.758494537082157 12 21.367303410123927 25.18284556020005 31.52263511502446 21.92721591465156 13 31.830110267299073 19.20261780157536 24.880793472547186 24.08647845857838 14 21.271302554540895 19.38738035206031 27.830410932091127 31.510906161307673 15 25.306642774914064 28.580685616620105 22.388176407499667 23.724495200966164 16 23.77751511647734 26.96897603459461 24.922538458356414 24.330970390571636 17 23.32520630346763 26.832869724367065 26.53170046118751 23.310223510977796 18 23.76086756926641 26.188433082409396 27.126093567286862 22.924605781037332 19 24.711265950115877 26.274041832763785 27.134316446666805 21.88037577045353 20 23.802410766624593 25.445523676343434 27.291610544253718 23.460455012778255 21 23.408191803958484 25.818327839642752 27.766191757547144 23.007288598851623 22 24.010732118768647 24.996922726121614 26.834383137749878 24.15796201735986 23 23.058341076965142 25.58097417410509 27.33739129908378 24.023293449845983 24 23.09362883234104 25.104021946511935 28.062316309450665 23.740032911696364 25 23.43429818481199 25.07776422432015 27.228602100415987 24.259335490451875 26 23.435584586187378 25.413994230868187 27.685299812235847 23.46512137070859 27 23.709688973370987 25.884413557358872 26.915754330632396 23.490143138637745 28 23.21089314595258 26.259765299852596 26.79109951500146 23.738242039193374 29 23.20605022312758 26.42033845976893 27.373385314038323 23.000226003065166 30 23.838202993128093 26.0618108293808 27.080438930238703 23.019547247252397 31 23.482147271265223 25.721318041804516 27.198939198112875 23.597595488817387 32 22.783126853300807 26.269350251277068 27.42042724668739 23.527095648734736 33 23.182693209919517 25.256170438597287 27.58019325279956 23.980943098683632 34 23.57504562941349 25.624056008402473 27.761928976518885 23.03896938566515 35 23.297157708772854 25.812248962555127 27.25410311591637 23.636490212755653 36 22.899079541980573 25.323138980786712 28.11773246281796 23.660049014414756 37 22.74408078802426 25.23470519211774 28.000342031424513 24.020871988433488 38 23.001310615989514 24.770541307609342 28.20094497531623 24.027203101084915 39 22.47494544144755 24.90054351719288 28.868536842030917 23.75597419932865 40 23.008600223783393 24.534474043447073 28.60747303349587 23.849452699273662 41 21.97579648423982 24.81783547582221 29.12004092269787 24.0863271172401 42 21.721770047934847 24.92594363846774 28.958509267639087 24.393777045958327 43 21.297762065183722 24.51399251566635 28.982572540425792 25.205672878724133 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1103.0 1 1353.0 2 1603.0 3 4188.0 4 6773.0 5 6773.0 6 7956.5 7 9140.0 8 8071.0 9 7002.0 10 9602.5 11 12203.0 12 12203.0 13 18677.5 14 25152.0 15 43988.0 16 62824.0 17 52022.0 18 41220.0 19 41220.0 20 46360.5 21 51501.0 22 41782.5 23 32064.0 24 34928.0 25 37792.0 26 37792.0 27 45122.5 28 52453.0 29 60119.0 30 67785.0 31 78383.5 32 88982.0 33 88982.0 34 101566.0 35 114150.0 36 129181.0 37 144212.0 38 162446.0 39 180680.0 40 180680.0 41 199904.0 42 219128.0 43 239014.5 44 258901.0 45 285087.5 46 311274.0 47 311274.0 48 335768.0 49 360262.0 50 369000.0 51 377738.0 52 360280.0 53 342822.0 54 342822.0 55 318789.5 56 294757.0 57 270988.5 58 247220.0 59 226376.5 60 205533.0 61 205533.0 62 176869.0 63 148205.0 64 122960.5 65 97716.0 66 80459.5 67 63203.0 68 63203.0 69 51271.5 70 39340.0 71 31967.0 72 24594.0 73 19936.0 74 15278.0 75 15278.0 76 12129.5 77 8981.0 78 7311.0 79 5641.0 80 4583.0 81 3525.0 82 3525.0 83 2736.0 84 1947.0 85 1504.0 86 1061.0 87 778.0 88 495.0 89 495.0 90 337.5 91 180.0 92 124.0 93 68.0 94 48.5 95 29.0 96 29.0 97 18.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3964548.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.517959232573624 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31639062421787 43.78685709758568 2 10.268564182800162 11.196423269899297 3 3.4045096321804227 5.568207520023495 4 1.6754000756473135 3.65357572089564 5 0.9791527200242817 2.6690704036373676 6 0.6384164974662199 2.0883098749359488 7 0.4482854647906135 1.7107726085806987 8 0.31901257073534783 1.3913531460822561 9 0.25669491252166243 1.2595034498458537 >10 1.5570829329235298 15.694045572398746 >50 0.09654279668639466 3.55981997705863 >100 0.03699363212340086 3.420249896443569 >500 0.0015692901446686162 0.5930939597074381 >1k 0.0012000453728005706 1.3380219576975236 >5k 4.615559126156041E-5 0.2288079448855377 >10k+ 1.3846677378468123E-4 1.841887600322401 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40167 1.0131545891234006 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16743 0.4223180044736499 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16288 0.41084128632066 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9093 0.22935779816513763 No Hit CCCATAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4067 0.10258420379826401 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.522355638019769E-5 0.0 2 0.0 0.0 0.0 2.522355638019769E-5 0.0 3 0.0 0.0 0.0 5.044711276039538E-5 0.0 4 0.0 0.0 0.0 5.044711276039538E-5 0.0 5 0.0 0.0 0.0 5.044711276039538E-5 0.0 6 0.0 0.0 0.0 5.044711276039538E-5 0.0 7 2.522355638019769E-5 0.0 0.0 5.044711276039538E-5 0.0 8 1.0089422552079076E-4 0.0 0.0 5.044711276039538E-5 2.522355638019769E-5 9 1.7656489466138383E-4 0.0 0.0 7.567066914059307E-5 2.522355638019769E-5 10 3.2790623294257E-4 0.0 0.0 1.2611778190098845E-4 2.522355638019769E-5 11 3.783533457029654E-4 0.0 0.0 2.0178845104158153E-4 2.522355638019769E-5 12 3.783533457029654E-4 0.0 0.0 3.2790623294257E-4 2.522355638019769E-5 13 3.783533457029654E-4 0.0 0.0 4.0357690208316305E-4 2.522355638019769E-5 14 5.296946839841516E-4 0.0 0.0 4.2880045846336077E-4 5.044711276039538E-5 15 5.549182403643492E-4 0.0 2.522355638019769E-5 5.296946839841516E-4 1.0089422552079076E-4 16 5.801417967445469E-4 0.0 2.522355638019769E-5 7.314831350257331E-4 1.2611778190098845E-4 17 5.801417967445469E-4 0.0 2.522355638019769E-5 8.576009169267215E-4 1.2611778190098845E-4 18 6.053653531247446E-4 0.0 2.522355638019769E-5 9.8371869882771E-4 1.2611778190098845E-4 19 6.5581246588514E-4 0.0 2.522355638019769E-5 0.0012107307062494892 1.5134133828118614E-4 20 7.314831350257331E-4 0.0 2.522355638019769E-5 0.0019422138412752224 1.5134133828118614E-4 21 9.332715860673146E-4 0.0 2.522355638019769E-5 0.0028250383145821414 1.7656489466138383E-4 22 9.8371869882771E-4 0.0 2.522355638019769E-5 0.004893369937758353 1.7656489466138383E-4 23 9.8371869882771E-4 0.0 2.522355638019769E-5 0.0058770886365860624 2.2701200742177922E-4 24 9.8371869882771E-4 0.0 2.522355638019769E-5 0.007667961139580098 2.2701200742177922E-4 25 9.8371869882771E-4 0.0 2.522355638019769E-5 0.008323773605465238 2.522355638019769E-4 26 9.8371869882771E-4 0.0 2.522355638019769E-5 0.009357939417053344 2.774591201821746E-4 27 9.8371869882771E-4 0.0 2.522355638019769E-5 0.019296020630851233 2.774591201821746E-4 28 9.8371869882771E-4 0.0 2.522355638019769E-5 0.08929138958589983 2.774591201821746E-4 29 9.8371869882771E-4 0.0 2.522355638019769E-5 0.22597784161019113 2.774591201821746E-4 30 9.8371869882771E-4 0.0 2.522355638019769E-5 0.3713916441420308 2.774591201821746E-4 31 9.8371869882771E-4 0.0 2.522355638019769E-5 0.8390616029872763 2.774591201821746E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGGT 2370 0.0 22.87131 11 GGTATCA 6045 0.0 20.382135 1 TCGGTGA 2755 0.0 20.14519 13 CGGTGAT 2785 0.0 19.795332 14 GTCGGTG 2775 0.0 19.733334 12 GGCAGTC 3040 0.0 18.682566 8 CGCCTTA 2135 0.0 18.629976 25 GCAGTCG 2995 0.0 18.530884 9 CAGTCGG 3005 0.0 18.284525 10 GTGATTC 3020 0.0 17.887419 16 CTCGCCT 2295 0.0 17.492374 23 GGGCAGT 3250 0.0 17.41846 7 TCGCCTT 2310 0.0 17.378788 24 GGTGATT 3125 0.0 17.3456 15 TATACCG 235 0.0 17.319149 5 AACGCAG 13870 0.0 17.246216 5 CTTATAC 3975 0.0 17.080503 37 TCCTCGC 2420 0.0 16.971073 21 TTCCTCG 2425 0.0 16.936083 20 GCCTTAT 2405 0.0 16.615385 26 >>END_MODULE