##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727309.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1861319 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.179026271155024 33.0 31.0 34.0 30.0 34.0 2 32.334755084969316 34.0 31.0 34.0 30.0 34.0 3 32.42663186697175 34.0 31.0 34.0 30.0 34.0 4 36.003018826971626 37.0 35.0 37.0 35.0 37.0 5 35.776404796813445 37.0 35.0 37.0 35.0 37.0 6 35.78169835476885 37.0 35.0 37.0 35.0 37.0 7 35.75188723695401 37.0 35.0 37.0 33.0 37.0 8 35.6994744049784 37.0 35.0 37.0 33.0 37.0 9 37.52626497661067 39.0 37.0 39.0 35.0 39.0 10 37.33474057912695 39.0 37.0 39.0 34.0 39.0 11 37.43979618754228 39.0 37.0 39.0 35.0 39.0 12 37.35946981683419 39.0 37.0 39.0 34.0 39.0 13 37.44511445915504 39.0 37.0 39.0 35.0 39.0 14 38.64032656411931 40.0 38.0 41.0 35.0 41.0 15 38.55216327776163 40.0 38.0 41.0 34.0 41.0 16 38.521763867450986 40.0 38.0 41.0 34.0 41.0 17 38.44344628728337 40.0 38.0 41.0 34.0 41.0 18 38.41301034374011 40.0 38.0 41.0 34.0 41.0 19 38.46143406906608 40.0 38.0 41.0 34.0 41.0 20 38.41622258194324 40.0 38.0 41.0 34.0 41.0 21 38.37389560843681 40.0 38.0 41.0 34.0 41.0 22 38.33619223787003 40.0 38.0 41.0 34.0 41.0 23 38.262604099565955 40.0 38.0 41.0 34.0 41.0 24 38.21685267275518 40.0 38.0 41.0 34.0 41.0 25 38.09758080157136 40.0 38.0 41.0 33.0 41.0 26 37.98031288564722 40.0 37.0 41.0 33.0 41.0 27 37.876685296824455 40.0 37.0 41.0 33.0 41.0 28 37.77468988389416 40.0 37.0 41.0 33.0 41.0 29 37.689590553795455 40.0 37.0 41.0 33.0 41.0 30 37.619591805595924 40.0 37.0 41.0 33.0 41.0 31 37.526449791787435 39.0 37.0 41.0 32.0 41.0 32 37.43064407551849 39.0 37.0 41.0 32.0 41.0 33 37.32604835603139 39.0 36.0 41.0 32.0 41.0 34 37.23203008189354 39.0 36.0 41.0 31.0 41.0 35 37.16467085975053 39.0 36.0 41.0 31.0 41.0 36 37.07421618755302 39.0 36.0 41.0 31.0 41.0 37 36.98300882331293 39.0 36.0 40.0 31.0 41.0 38 36.88251288468017 39.0 36.0 40.0 31.0 41.0 39 36.76828797213159 39.0 36.0 40.0 30.0 41.0 40 36.64407498123642 39.0 35.0 40.0 30.0 41.0 41 36.53070859965433 39.0 35.0 40.0 30.0 41.0 42 36.415726697035815 39.0 35.0 40.0 30.0 41.0 43 34.67005548216077 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 2.0 12 2.0 13 2.0 14 6.0 15 5.0 16 4.0 17 22.0 18 54.0 19 129.0 20 285.0 21 511.0 22 995.0 23 1815.0 24 3021.0 25 4948.0 26 7416.0 27 11242.0 28 16057.0 29 21775.0 30 29313.0 31 37741.0 32 48773.0 33 63808.0 34 84474.0 35 116976.0 36 171575.0 37 283063.0 38 525087.0 39 432213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.865989655722636 17.213062349871247 12.580755904818036 26.340192089588083 2 16.883940904272723 20.249779860410815 36.92279507166692 25.94348416364954 3 18.62996079661788 21.976136277553714 30.697209881809616 28.696693044018783 4 13.652952556762166 14.941823513325767 34.83798317214835 36.56724075776371 5 14.451096238742526 36.99516310745229 34.60852223611321 13.94521841769197 6 35.58804267296471 35.736539518481244 14.676044246042725 13.999373562511316 7 29.93839315023379 30.691085192812196 20.81604496596231 18.554476690991713 8 27.798244148370056 36.306887750031024 18.83406337119 17.06080473040892 9 26.772949720064105 13.555226159513763 18.09732775521015 41.574496365211985 10 15.122286937381501 27.529080184535804 34.23013465182486 23.11849822625783 11 37.43689287005613 20.781338394976896 21.426149950653272 20.3556187843137 12 21.28361661810791 24.677661378839414 31.234785654688963 22.803936348363717 13 31.976517727482502 18.6919598413813 24.511703797146005 24.8198186339902 14 21.870136177624577 18.99593782688513 26.99241774247187 32.14150825301842 15 25.43594085699442 27.67215077050199 22.177767486390028 24.714140886113555 16 24.647091659194366 25.825073509699305 24.42842951691784 25.099405314188488 17 24.046173707999543 26.26476170930399 25.988452274972744 23.700612307723716 18 24.239746115523452 25.471238406742746 26.389028425541245 23.899987052192557 19 25.299908290841067 25.560315023915837 26.137164021857618 23.00261266338548 20 24.454593758512107 25.35239795005585 26.119918187049073 24.073090104382967 21 24.042359208711673 25.709832650931947 26.271746003774744 23.97606213658164 22 24.638226977750723 25.058735230231893 25.74631215820609 24.55672563381129 23 23.940710861491233 25.13266130093767 26.217053605534566 24.70957423203653 24 24.071048541383824 24.983466025974053 26.384408046122132 24.56107738651999 25 24.499669320519484 24.951069644698194 26.04679799647454 24.50246303830778 26 24.147875780562064 25.257626446621995 26.457581962038745 24.136915810777197 27 24.66471357139749 25.53957704187192 26.000970279678015 23.794739107052578 28 24.40898094308391 25.796975155790058 25.791065368160965 24.002978532965063 29 24.004160490490882 25.838236218509564 26.16424159426729 23.99336169673226 30 24.259517041409882 25.61935917486471 26.08617867222115 24.03494511150426 31 24.0813638070637 25.035687058478423 26.287380078320805 24.595569056137073 32 23.586714582508424 25.539254689819423 26.393702530302438 24.48032819736971 33 24.013831052065765 24.952412778250263 26.331596034854854 24.702160134829118 34 24.14277187306421 24.96938998634839 26.824311147095152 24.06352699349225 35 23.944417910094938 24.991148749891877 26.580236918013515 24.48419642199967 36 23.77314151953534 24.61996036144261 26.96061233995892 24.646285779063128 37 23.43209304799446 24.34348975108512 27.06204578581103 25.16237141510939 38 23.443267919147658 24.29648007676277 27.50033712652157 24.759914877568004 39 23.15374205066407 24.11934762391616 27.99530870312934 24.73160162229043 40 23.432630301415287 24.122839771151533 28.050269728079925 24.394260199353255 41 22.860938936313442 23.90965761376744 28.37310530865478 24.85629814126434 42 22.342650561241786 24.170494149578875 28.33925834314269 25.147596946036654 43 22.116896673810345 23.627116039754604 28.363757099132393 25.892230187302662 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 69.0 1 126.5 2 184.0 3 1088.5 4 1993.0 5 1993.0 6 2700.5 7 3408.0 8 3192.5 9 2977.0 10 3816.0 11 4655.0 12 4655.0 13 7323.5 14 9992.0 15 16055.5 16 22119.0 17 17107.0 18 12095.0 19 12095.0 20 13016.5 21 13938.0 22 11885.0 23 9832.0 24 12040.0 25 14248.0 26 14248.0 27 17405.5 28 20563.0 29 23695.0 30 26827.0 31 31668.0 32 36509.0 33 36509.0 34 42497.5 35 48486.0 36 56114.5 37 63743.0 38 73097.5 39 82452.0 40 82452.0 41 92822.0 42 103192.0 43 114341.5 44 125491.0 45 136566.0 46 147641.0 47 147641.0 48 158555.5 49 169470.0 50 171916.0 51 174362.0 52 172193.0 53 170024.0 54 170024.0 55 159346.0 56 148668.0 57 136438.5 58 124209.0 59 114073.5 60 103938.0 61 103938.0 62 90876.5 63 77815.0 64 65226.0 65 52637.0 66 43687.0 67 34737.0 68 34737.0 69 28392.0 70 22047.0 71 17885.0 72 13723.0 73 11085.0 74 8447.0 75 8447.0 76 6732.0 77 5017.0 78 3902.0 79 2787.0 80 2212.5 81 1638.0 82 1638.0 83 1204.5 84 771.0 85 568.0 86 365.0 87 263.0 88 161.0 89 161.0 90 109.0 91 57.0 92 40.0 93 23.0 94 14.5 95 6.0 96 6.0 97 4.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1861319.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.14020451377292 #Duplication Level Percentage of deduplicated Percentage of total 1 83.19581186063763 52.53000575570036 2 9.046544562892166 11.424013476879438 3 2.895922608192974 5.485474372120893 4 1.4246119367339054 3.5980115615256367 5 0.8262294842931432 2.6084149306789106 6 0.536926621664583 2.0340994020474574 7 0.3707680464792599 1.6387259197310777 8 0.281093016668106 1.4198616447854073 9 0.21149212700164172 1.2018290536742848 >10 1.1448529525297448 12.51124314770546 >50 0.048129874496694695 2.0358669827455023 >100 0.016425879059101832 1.7186213666331174 >500 4.253676253588883E-4 0.16888183922349398 >1k 6.805882005742211E-4 0.9415807123882396 >5k 0.0 0.0 >10k+ 8.507352507177763E-5 0.6833698341607156 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12722 0.6834938019759106 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4341 0.2332217099809329 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4023 0.21613705119863927 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3203 0.17208227069083804 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 2 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 3 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 4 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 5 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 6 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 7 0.0 0.0 0.0 5.3725342082684375E-5 5.3725342082684375E-5 8 0.0 0.0 0.0 5.3725342082684375E-5 1.0745068416536875E-4 9 0.0 0.0 0.0 5.3725342082684375E-5 1.0745068416536875E-4 10 0.0 0.0 0.0 5.3725342082684375E-5 1.0745068416536875E-4 11 0.0 0.0 0.0 5.3725342082684375E-5 1.0745068416536875E-4 12 0.0 0.0 0.0 1.6117602624805312E-4 1.0745068416536875E-4 13 0.0 0.0 0.0 1.6117602624805312E-4 1.0745068416536875E-4 14 0.0 0.0 0.0 1.6117602624805312E-4 1.0745068416536875E-4 15 5.3725342082684375E-5 0.0 0.0 3.7607739457879065E-4 2.149013683307375E-4 16 5.3725342082684375E-5 0.0 0.0 8.058801312402656E-4 3.2235205249610624E-4 17 5.3725342082684375E-5 0.0 0.0 0.0011819575258190562 3.2235205249610624E-4 18 5.3725342082684375E-5 0.0 0.0 0.0014505842362324782 3.2235205249610624E-4 19 5.3725342082684375E-5 0.0 0.0 0.0020952883412246907 3.2235205249610624E-4 20 1.0745068416536875E-4 0.0 0.0 0.0034921472353744844 3.2235205249610624E-4 21 1.6117602624805312E-4 0.0 0.0 0.005372534208268437 3.2235205249610624E-4 22 2.149013683307375E-4 0.0 0.0 0.008166251996568025 3.2235205249610624E-4 23 2.149013683307375E-4 0.0 0.0 0.010046638969461978 4.29802736661475E-4 24 2.149013683307375E-4 0.0 0.0 0.014183490309828675 4.835280787441594E-4 25 2.149013683307375E-4 0.0 0.0 0.01595642659855726 4.835280787441594E-4 26 2.149013683307375E-4 0.0 0.0 0.019985827254758587 4.835280787441594E-4 27 2.149013683307375E-4 0.0 0.0 0.036694408642473426 4.835280787441594E-4 28 2.149013683307375E-4 0.0 0.0 0.16622620840382546 4.835280787441594E-4 29 2.149013683307375E-4 0.0 0.0 0.39386048280815916 4.835280787441594E-4 30 2.149013683307375E-4 0.0 0.0 0.6578130884603876 4.835280787441594E-4 31 2.149013683307375E-4 0.0 0.0 1.2687776786246743 4.835280787441594E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGG 70 5.1047246E-6 21.142859 5 GCGTTAT 55 5.14474E-4 20.181818 1 GACCGTA 120 1.04219E-7 16.958334 26 TATACAC 1080 0.0 16.273148 37 CTTATAC 2630 0.0 15.897339 37 TGATCGC 120 1.936969E-6 15.416667 9 TCCTAGA 255 0.0 15.235294 2 GTCCTAG 320 0.0 15.03125 1 ACCCGAC 580 0.0 14.991379 11 AACGCAG 5640 0.0 14.8262415 5 CGGTGAT 325 0.0 14.8 14 ATACCGT 125 2.9609455E-6 14.799999 6 ATACCGA 100 1.09394205E-4 14.799999 6 ATAAGAC 230 1.8189894E-12 14.47826 3 TATACCG 115 2.2111888E-5 14.47826 5 GTATAAG 275 0.0 14.127274 1 CTAGTAC 105 1.6565005E-4 14.095238 3 GTATCGC 105 1.6565005E-4 14.095238 6 GTATTAA 395 0.0 14.050632 1 GTATTAC 185 4.9039954E-9 14.0 1 >>END_MODULE