##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727308.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2273854 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.225090968901256 33.0 31.0 34.0 30.0 34.0 2 32.366924613453634 34.0 31.0 34.0 30.0 34.0 3 32.45549714273652 34.0 31.0 34.0 30.0 34.0 4 36.01778522279795 37.0 35.0 37.0 35.0 37.0 5 35.801726056290335 37.0 35.0 37.0 35.0 37.0 6 35.81658101179759 37.0 35.0 37.0 35.0 37.0 7 35.781884852765394 37.0 35.0 37.0 35.0 37.0 8 35.735154499805176 37.0 35.0 37.0 33.0 37.0 9 37.561152123223394 39.0 37.0 39.0 35.0 39.0 10 37.36430879027414 39.0 37.0 39.0 34.0 39.0 11 37.480235758320454 39.0 37.0 39.0 35.0 39.0 12 37.39492992953813 39.0 37.0 39.0 34.0 39.0 13 37.48529193167195 39.0 37.0 39.0 35.0 39.0 14 38.67904139843631 40.0 38.0 41.0 35.0 41.0 15 38.59786204391311 40.0 38.0 41.0 34.0 41.0 16 38.567141074141084 40.0 38.0 41.0 34.0 41.0 17 38.49944983275091 40.0 38.0 41.0 34.0 41.0 18 38.470568031192855 40.0 38.0 41.0 34.0 41.0 19 38.520926585436 40.0 38.0 41.0 34.0 41.0 20 38.48188626006771 40.0 38.0 41.0 34.0 41.0 21 38.436047784950134 40.0 38.0 41.0 34.0 41.0 22 38.39112273699191 40.0 38.0 41.0 34.0 41.0 23 38.32092034053198 40.0 38.0 41.0 34.0 41.0 24 38.27503832699901 40.0 38.0 41.0 34.0 41.0 25 38.15561289335199 40.0 38.0 41.0 33.0 41.0 26 38.031971709705196 40.0 37.0 41.0 33.0 41.0 27 37.929524059152435 40.0 37.0 41.0 33.0 41.0 28 37.830312324362076 40.0 37.0 41.0 33.0 41.0 29 37.732919088032915 40.0 37.0 41.0 33.0 41.0 30 37.65172258201274 40.0 37.0 41.0 33.0 41.0 31 37.54233033431346 39.0 37.0 41.0 32.0 41.0 32 37.437665742831335 39.0 36.0 41.0 32.0 41.0 33 37.32923705743641 39.0 36.0 41.0 32.0 41.0 34 37.21409026261141 39.0 36.0 41.0 31.0 41.0 35 37.12543945213721 39.0 36.0 41.0 31.0 41.0 36 37.02767899786002 39.0 36.0 41.0 31.0 41.0 37 36.91772338945245 39.0 36.0 41.0 31.0 41.0 38 36.80423501245023 39.0 35.0 40.0 31.0 41.0 39 36.67878632489157 39.0 35.0 40.0 30.0 41.0 40 36.540760312667395 39.0 35.0 40.0 30.0 41.0 41 36.40324048949493 39.0 35.0 40.0 30.0 41.0 42 36.265101893085486 39.0 35.0 40.0 30.0 41.0 43 34.560409771251805 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 12.0 11 11.0 12 7.0 13 4.0 14 5.0 15 9.0 16 18.0 17 34.0 18 53.0 19 152.0 20 304.0 21 642.0 22 1259.0 23 2206.0 24 3761.0 25 5965.0 26 9188.0 27 13680.0 28 19606.0 29 27164.0 30 35364.0 31 46231.0 32 59478.0 33 77590.0 34 103033.0 35 140870.0 36 207919.0 37 343234.0 38 631085.0 39 544962.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.54903437072037 17.175069287649954 12.305143602007869 25.970752739621805 2 16.80587232073827 20.714742459278387 36.751524064429816 25.727861155553523 3 18.73805442213968 22.153357251608945 30.776162409723756 28.33242591652762 4 13.325085955386756 14.793122161757088 35.183481437242676 36.69831044561348 5 14.364114846423737 37.270378836987774 34.59127103147344 13.774235285115052 6 35.4558384135481 36.061550125909584 14.54693221288614 13.935679247656182 7 29.823418741924502 30.870099839303666 20.822137217253175 18.484344201518653 8 28.05927733266956 36.140271099199865 18.73260112566594 17.067850442464643 9 26.689180571839703 13.427423220664123 18.22170640683175 41.66168980066442 10 14.851877033441902 27.978577340497672 34.20852877977214 22.961016846288285 11 37.42412661498935 20.839112801437558 21.492145054167946 20.24461552940514 12 21.130292446216863 25.038458933599077 31.448545069296447 22.382703550887612 13 31.945014939393644 18.785814744482277 24.608484097923615 24.660686218200464 14 21.64061544848526 18.993831618037042 27.496928122913783 31.868624810563915 15 25.09853315120496 28.079375368867133 22.463799346835813 24.3582921330921 16 24.346681888986716 26.099872727096812 24.468677408487967 25.084767975428502 17 23.937508740666726 26.385291228020797 26.234973749413992 23.44222628189849 18 23.840492837270993 25.503132566998588 26.806162576840904 23.850212018889515 19 24.876267341702675 25.607492829354918 26.698503949681907 22.817735879260496 20 24.302351866038894 25.616904163591858 26.454732801666246 23.626011168703005 21 23.752272573349035 25.903773945029013 26.7202731573795 23.623680324242454 22 24.31405006653901 25.432591538418915 26.26822126662486 23.985137128417218 23 23.505818755293877 25.487168481353685 26.552804181798834 24.454208581553612 24 23.697255848440577 25.322206263023045 26.801412931525064 24.17912495701131 25 24.060119954931146 25.26534245382509 26.631569133286483 24.042968457957283 26 23.748534426572682 25.639245087855244 26.732235227063832 23.879985258508242 27 24.070190962128617 25.904301683397442 26.583808810943886 23.44169854353006 28 23.87928160735034 26.125248146978652 26.409039454599988 23.58643079107102 29 23.567080384228714 26.13202078937346 26.597969790496663 23.702929035901164 30 23.70367666525643 26.202429883361024 26.578267558075407 23.515625893307135 31 23.50401564920175 25.525913273235663 26.733466616590157 24.236604460972426 32 23.201533607698646 26.13307626611031 26.778368356103776 23.887021770087262 33 23.652486043519065 25.53251000284099 26.680736757944885 24.13426719569506 34 23.710669198638083 25.6542856313554 27.019500812277304 23.615544357729213 35 23.662864898098118 25.669634022237137 26.784305412748576 23.883195666916173 36 23.4292087354773 25.365041027260325 27.089953884462236 24.115796352800135 37 23.351807108108083 25.16093821327139 27.00890206671141 24.47835261190912 38 23.13235590323741 25.22945624477209 27.40219908578123 24.235988766209264 39 22.948043278064468 25.004859590809257 27.844487816719983 24.20260931440629 40 23.059220161012973 24.964839431203586 27.962833145839618 24.01310726194382 41 22.7705472734837 24.69753994759558 28.13940560827564 24.392507170645082 42 22.31770377517642 24.843063802689176 28.225470940526527 24.61376148160788 43 22.238630976307185 24.427909619527025 28.2197097966712 25.11374960749459 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 179.0 1 263.0 2 347.0 3 1739.0 4 3131.0 5 3131.0 6 4164.5 7 5198.0 8 4967.0 9 4736.0 10 6054.5 11 7373.0 12 7373.0 13 11929.0 14 16485.0 15 26590.0 16 36695.0 17 28457.0 18 20219.0 19 20219.0 20 21548.5 21 22878.0 22 19098.5 23 15319.0 24 18483.5 25 21648.0 26 21648.0 27 26044.0 28 30440.0 29 34066.0 30 37692.0 31 42076.5 32 46461.0 33 46461.0 34 52718.5 35 58976.0 36 68025.5 37 77075.0 38 87343.0 39 97611.0 40 97611.0 41 109827.0 42 122043.0 43 135311.0 44 148579.0 45 161058.0 46 173537.0 47 173537.0 48 185250.5 49 196964.0 50 199393.5 51 201823.0 52 199913.5 53 198004.0 54 198004.0 55 187601.0 56 177198.0 57 164942.5 58 152687.0 59 139131.5 60 125576.0 61 125576.0 62 110331.5 63 95087.0 64 80734.0 65 66381.0 66 55250.0 67 44119.0 68 44119.0 69 35701.5 70 27284.0 71 22630.5 72 17977.0 73 14305.5 74 10634.0 75 10634.0 76 8315.5 77 5997.0 78 4809.0 79 3621.0 80 2737.0 81 1853.0 82 1853.0 83 1460.0 84 1067.0 85 821.0 86 575.0 87 408.0 88 241.0 89 241.0 90 160.5 91 80.0 92 58.5 93 37.0 94 30.0 95 23.0 96 23.0 97 13.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2273854.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.14858476943041 #Duplication Level Percentage of deduplicated Percentage of total 1 83.836894789401 52.10344362624907 2 9.118927501093053 11.334568776159434 3 2.7057037749324624 5.044669812520739 4 1.2677061059845691 3.151445615620261 5 0.7260051039695365 2.2560094873544942 6 0.4498166460302758 1.6773280773908077 7 0.3067239471830034 1.334372146262203 8 0.22854878106147256 1.1363186634999134 9 0.1759666047969595 0.9842467909331428 >10 1.0841895648194122 12.39748529140564 >50 0.06923777790518243 2.9150363334663765 >100 0.028508796610456397 2.987785870851794 >500 0.00106236372754386 0.4255492801662773 >1k 4.249454910174651E-4 0.4642835961101787 >5k 2.1247274550873255E-4 0.8605620579778255 >10k+ 7.082424850291086E-5 0.9268945740318678 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21058 0.9260928801937152 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7349 0.32319577246384334 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6851 0.3012946301741449 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5351 0.23532733412083626 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2558 0.11249622886957562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 2 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 3 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 4 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 5 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 6 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 7 0.0 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 8 4.397819736887241E-5 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 9 4.397819736887241E-5 0.0 0.0 4.397819736887241E-5 4.397819736887241E-5 10 4.397819736887241E-5 0.0 0.0 8.795639473774482E-5 4.397819736887241E-5 11 4.397819736887241E-5 0.0 0.0 1.7591278947548964E-4 4.397819736887241E-5 12 4.397819736887241E-5 0.0 0.0 3.958037763198517E-4 4.397819736887241E-5 13 4.397819736887241E-5 0.0 0.0 4.397819736887241E-4 4.397819736887241E-5 14 4.397819736887241E-5 0.0 0.0 4.837601710575965E-4 4.397819736887241E-5 15 8.795639473774482E-5 0.0 0.0 5.27738368426469E-4 4.397819736887241E-5 16 1.3193459210661724E-4 0.0 0.0 8.795639473774482E-4 4.397819736887241E-5 17 1.3193459210661724E-4 0.0 0.0 0.0012313895263284275 4.397819736887241E-5 18 1.3193459210661724E-4 0.0 0.0 0.0012313895263284275 4.397819736887241E-5 19 1.3193459210661724E-4 0.0 0.0 0.0015392369079105343 4.397819736887241E-5 20 1.3193459210661724E-4 0.0 0.0 0.002154931671074748 4.397819736887241E-5 21 1.3193459210661724E-4 0.0 0.0 0.0036501903816164097 4.397819736887241E-5 22 1.3193459210661724E-4 0.0 0.0 0.006376838618486499 4.397819736887241E-5 23 1.3193459210661724E-4 0.0 0.0 0.007520271750077182 4.397819736887241E-5 24 1.3193459210661724E-4 0.0 0.0 0.011082505736955846 4.397819736887241E-5 25 1.3193459210661724E-4 0.0 0.0 0.013545284789612701 4.397819736887241E-5 26 1.3193459210661724E-4 0.0 0.0 0.01622795482911392 4.397819736887241E-5 27 1.3193459210661724E-4 0.0 0.0 0.027134547776594277 4.397819736887241E-5 28 1.3193459210661724E-4 0.0 0.0 0.11447524775117487 4.397819736887241E-5 29 1.3193459210661724E-4 0.0 0.0 0.2759631884896744 4.397819736887241E-5 30 1.3193459210661724E-4 0.0 0.0 0.4636621348600218 4.397819736887241E-5 31 1.3193459210661724E-4 0.0 0.0 0.9047194762724432 4.397819736887241E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 120 0.0 23.124998 5 TATACCG 105 9.840733E-10 21.142859 5 ATACGAT 85 2.7250138E-5 17.411764 6 TACGTAG 65 0.0015805764 17.076923 12 ACGCGCA 185 1.8189894E-12 17.0 19 AATCGGG 175 7.2759576E-12 16.914286 25 TACCGAC 110 7.81587E-7 16.818182 7 ACCGATT 200 0.0 16.650002 20 GTCTTAT 270 0.0 16.444443 1 AGTCGGT 285 0.0 16.228071 11 CAATCGG 230 0.0 16.086956 24 CGACCGA 185 1.8189894E-11 16.0 18 AACGCAG 8265 0.0 15.892318 5 TCTTAGA 805 0.0 15.627328 2 CGACGCG 190 2.7284841E-11 15.578948 17 ATACCGA 95 7.064534E-5 15.578948 6 CGCGCAA 215 0.0 15.488372 20 CGCGAAC 85 5.367019E-4 15.235294 12 CTTATAC 2290 0.0 15.187774 37 CGCAATC 195 4.1836756E-11 15.179487 22 >>END_MODULE