##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727307.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8499037 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.086138700184506 33.0 31.0 34.0 30.0 34.0 2 32.23139656881126 33.0 31.0 34.0 30.0 34.0 3 32.314573286361735 34.0 31.0 34.0 30.0 34.0 4 35.895982097736486 37.0 35.0 37.0 35.0 37.0 5 35.77792295762449 37.0 35.0 37.0 35.0 37.0 6 35.79707948088707 37.0 35.0 37.0 35.0 37.0 7 35.740133029189074 37.0 35.0 37.0 35.0 37.0 8 35.716078303930196 37.0 35.0 37.0 33.0 37.0 9 37.439109630891124 39.0 37.0 39.0 35.0 39.0 10 37.27392774028399 39.0 37.0 39.0 34.0 39.0 11 37.38999324276386 39.0 37.0 39.0 34.0 39.0 12 37.29068446225143 39.0 37.0 39.0 34.0 39.0 13 37.35609657894182 39.0 37.0 39.0 34.0 39.0 14 38.49616562441133 40.0 38.0 41.0 34.0 41.0 15 38.45962324908104 40.0 38.0 41.0 34.0 41.0 16 38.39600027626659 40.0 38.0 41.0 34.0 41.0 17 38.36252977837371 40.0 38.0 41.0 34.0 41.0 18 38.32111485101194 40.0 38.0 41.0 34.0 41.0 19 38.33407490754541 40.0 38.0 41.0 34.0 41.0 20 38.22068817914312 40.0 38.0 41.0 34.0 41.0 21 38.14622150721311 40.0 38.0 41.0 33.0 41.0 22 38.07275153643877 40.0 38.0 41.0 33.0 41.0 23 37.95493054095423 40.0 37.0 41.0 33.0 41.0 24 37.84693348199331 40.0 37.0 41.0 33.0 41.0 25 37.755420408218015 40.0 37.0 41.0 32.0 41.0 26 37.390145495307294 39.0 37.0 41.0 32.0 41.0 27 37.171195630752045 39.0 36.0 41.0 31.0 41.0 28 37.00947542645125 39.0 36.0 40.0 31.0 41.0 29 36.95421457748684 39.0 36.0 40.0 31.0 41.0 30 36.86307742865456 39.0 36.0 40.0 30.0 41.0 31 36.64255915111324 39.0 36.0 40.0 30.0 41.0 32 36.522862296046014 39.0 35.0 40.0 30.0 41.0 33 36.328833607854634 39.0 35.0 40.0 30.0 41.0 34 36.18728380638889 39.0 35.0 40.0 29.0 41.0 35 36.028876448002286 38.0 35.0 40.0 28.0 41.0 36 35.86854557757544 38.0 35.0 40.0 27.0 41.0 37 35.624046347839176 38.0 35.0 40.0 26.0 41.0 38 35.50591531722947 38.0 35.0 40.0 26.0 41.0 39 35.3326938098987 38.0 34.0 40.0 25.0 41.0 40 35.182738585559754 38.0 34.0 40.0 25.0 41.0 41 35.028141070570705 38.0 34.0 40.0 24.0 41.0 42 34.813566878223966 38.0 33.0 40.0 24.0 41.0 43 31.46010471539305 35.0 28.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 13.0 10 43.0 11 60.0 12 58.0 13 46.0 14 76.0 15 96.0 16 242.0 17 480.0 18 938.0 19 2034.0 20 3954.0 21 7725.0 22 13566.0 23 22143.0 24 33243.0 25 47284.0 26 64546.0 27 85733.0 28 112372.0 29 142117.0 30 178066.0 31 223048.0 32 278336.0 33 350270.0 34 447379.0 35 589301.0 36 823625.0 37 1291630.0 38 2228953.0 39 1551659.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.44835032486622 18.50613193000572 12.93352411573217 26.111993629395897 2 18.5131327231544 21.7466990672002 34.324171079617614 25.41599713002779 3 18.691364680492626 22.32272903388937 30.858743172903004 28.127163112715003 4 14.797029357561334 15.610168540271092 33.1963609524232 36.396441149744376 5 14.518656643099684 37.48774125821549 33.71379604536372 14.279806053321101 6 36.33271628303301 35.390927230932164 13.87444248095402 14.40191400508081 7 30.047627748884963 30.987393042294087 20.025809982942775 18.93916922587818 8 28.56189471818984 35.15526523769693 18.402343700821636 17.8804963432916 9 27.240462654769004 13.624896561810473 17.910993916134263 41.223646867286256 10 15.571564166622643 28.215949642294767 33.28547693109231 22.92700925999028 11 37.44252437070224 21.294247807133914 20.61160576192338 20.65162206024047 12 21.62909750834124 25.467544146472125 29.728932819094684 23.17442552609196 13 32.237016970275576 19.47061767115498 23.41158180626817 24.880783552301278 14 22.418986998174027 20.157989664005463 25.894827849319867 31.52819548850064 15 25.777285120655435 28.23756385576389 21.534427959308804 24.45072306427187 16 24.73021355242953 26.16935306905947 23.824346217106715 25.276087161404288 17 24.405941520198112 26.28696639395734 25.21455077792931 24.092541307915237 18 24.235981088210345 25.58888730570299 25.870578043135943 24.30455356295072 19 25.398430433942103 25.568414398007683 25.81157135802562 23.221583810024597 20 24.782278274585696 25.443847344116747 25.62179691652125 24.152077464776305 21 24.520272120241387 25.78756863865871 25.678579820278465 24.01357942082144 22 25.186453477023342 25.236682697110275 25.004656409896793 24.572207415969597 23 24.524707916908703 25.369109464989975 25.394100531624936 24.712082086476386 24 24.412177520817945 25.20213760688417 25.485605016191837 24.90007985610605 25 24.682502264668337 24.9474852268557 25.47106219210482 24.89895031637114 26 24.29058727477007 25.2913006497089 25.885509146506834 24.532602929014192 27 24.854557051581256 25.596935276314248 25.445165140474153 24.103342531630346 28 24.45853571410502 25.833444424350667 25.389935353852444 24.31808450769187 29 24.31240151090059 25.977201887696218 25.594323215677257 24.116073385725937 30 24.614847540962582 25.797734496272927 25.305655217173427 24.28176274559106 31 24.363430821633088 25.25710854064996 25.5708852661778 24.808575371539153 32 23.910438323777154 25.707124230662835 25.563543257900868 24.818894187659144 33 24.217178958039597 25.180723416076432 25.63477485743385 24.96732276845012 34 24.393987224670276 25.02561172518722 26.179518926673694 24.40088212346881 35 24.206283606013244 25.033612631642853 26.0508572912437 24.709246471100197 36 23.92582830266535 24.574348835050372 26.58828288428442 24.911539977999862 37 23.607439289886607 24.336039483061434 26.850877340573998 25.20564388647796 38 23.43839660893346 24.18931697791173 27.247004572400378 25.125281840754425 39 23.033515444161498 24.09668295360992 27.92894065527659 24.94086094695199 40 23.302487093537774 23.937935556698953 28.13183423016043 24.627743119602844 41 22.72508050029668 23.91683904894166 28.51238322647613 24.84569722428553 42 22.313222074453847 24.122474110890447 28.52631421654006 25.037989598115644 43 22.332353653713945 23.310558596226844 28.421055232492808 25.936032517566403 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1871.0 1 1809.0 2 1747.0 3 4034.5 4 6322.0 5 6322.0 6 7064.5 7 7807.0 8 8051.5 9 8296.0 10 12452.5 11 16609.0 12 16609.0 13 32939.0 14 49269.0 15 79890.5 16 110512.0 17 81698.0 18 52884.0 19 52884.0 20 61958.0 21 71032.0 22 60319.0 23 49606.0 24 60290.5 25 70975.0 26 70975.0 27 86868.5 28 102762.0 29 118563.0 30 134364.0 31 155308.0 32 176252.0 33 176252.0 34 201471.5 35 226691.0 36 259300.0 37 291909.0 38 331471.5 39 371034.0 40 371034.0 41 413887.5 42 456741.0 43 500252.0 44 543763.0 45 588035.5 46 632308.0 47 632308.0 48 674065.0 49 715822.0 50 738117.0 51 760412.0 52 751587.5 53 742763.0 54 742763.0 55 704497.5 56 666232.0 57 622569.5 58 578907.0 59 533391.0 60 487875.0 61 487875.0 62 430182.5 63 372490.0 64 316568.5 65 260647.0 66 220314.0 67 179981.0 68 179981.0 69 149041.0 70 118101.0 71 99629.5 72 81158.0 73 67666.0 74 54174.0 75 54174.0 76 45104.5 77 36035.0 78 30363.5 79 24692.0 80 19828.0 81 14964.0 82 14964.0 83 12035.0 84 9106.0 85 7419.0 86 5732.0 87 4746.0 88 3760.0 89 3760.0 90 2828.0 91 1896.0 92 1396.0 93 896.0 94 656.0 95 416.0 96 416.0 97 288.0 98 160.0 99 112.0 100 64.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8499037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.16381205403036 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52520509045054 45.787662963663436 2 9.681902397019048 10.875450931032876 3 3.2908883116777603 5.54486497883625 4 1.561894278639514 3.5088774685509994 5 0.8680510238149283 2.4376527277425133 6 0.5774884653613142 1.946037217915396 7 0.4057494277830198 1.5951904222125124 8 0.3112244483853563 1.3983641140587537 9 0.2379438532383988 1.2027450467423892 >10 1.3877618077050085 14.525605145441226 >50 0.1082300484165993 4.161263917951585 >100 0.04095714448336789 3.8849849962637095 >500 0.0018446053938306834 0.7130475359355501 >1k 7.333760476181816E-4 0.678703734249382 >5k 4.1907194621036176E-5 0.16931109336618694 >10k+ 8.381438924207235E-5 1.5702377060371835 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 70540 0.829976384383313 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22942 0.269936464566515 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22055 0.2594999880574705 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17892 0.21051796809450296 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 9104 0.1071180181942966 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1766038905348924E-5 2 1.1766038905348924E-5 0.0 0.0 0.0 1.1766038905348924E-5 3 1.1766038905348924E-5 0.0 0.0 0.0 1.1766038905348924E-5 4 1.1766038905348924E-5 0.0 0.0 1.1766038905348924E-5 1.1766038905348924E-5 5 2.3532077810697848E-5 2.3532077810697848E-5 0.0 1.1766038905348924E-5 1.1766038905348924E-5 6 2.3532077810697848E-5 2.3532077810697848E-5 0.0 1.1766038905348924E-5 1.1766038905348924E-5 7 2.3532077810697848E-5 2.3532077810697848E-5 0.0 1.1766038905348924E-5 2.3532077810697848E-5 8 2.3532077810697848E-5 2.3532077810697848E-5 0.0 1.1766038905348924E-5 5.883019452674462E-5 9 2.3532077810697848E-5 2.3532077810697848E-5 0.0 2.3532077810697848E-5 9.412831124279139E-5 10 4.7064155621395695E-5 2.3532077810697848E-5 0.0 3.529811671604677E-5 9.412831124279139E-5 11 5.883019452674462E-5 2.3532077810697848E-5 0.0 7.059623343209355E-5 9.412831124279139E-5 12 5.883019452674462E-5 2.3532077810697848E-5 0.0 7.059623343209355E-5 9.412831124279139E-5 13 5.883019452674462E-5 2.3532077810697848E-5 0.0 1.1766038905348924E-4 1.2942642795883816E-4 14 5.883019452674462E-5 2.3532077810697848E-5 0.0 1.8825662248558278E-4 1.52958505769536E-4 15 5.883019452674462E-5 4.7064155621395695E-5 0.0 3.294490893497699E-4 1.6472454467488494E-4 16 7.059623343209355E-5 4.7064155621395695E-5 0.0 6.706642176048886E-4 2.1178870029628063E-4 17 7.059623343209355E-5 4.7064155621395695E-5 0.0 0.0010236453847653564 2.1178870029628063E-4 18 7.059623343209355E-5 4.7064155621395695E-5 0.0 0.0011413057738188456 2.2355473920162956E-4 19 7.059623343209355E-5 4.7064155621395695E-5 0.0 0.001541351096600709 2.2355473920162956E-4 20 8.236227233744247E-5 4.7064155621395695E-5 0.0 0.0022120153142055976 2.2355473920162956E-4 21 9.412831124279139E-5 4.7064155621395695E-5 0.0 0.0035180456326993283 2.588528559176763E-4 22 9.412831124279139E-5 4.7064155621395695E-5 0.0 0.005706528869094228 2.823849337283742E-4 23 1.0589435014814031E-4 4.7064155621395695E-5 0.0 0.00710668749883075 4.3534343949791016E-4 24 1.0589435014814031E-4 4.7064155621395695E-5 0.0 0.009212808462888208 4.3534343949791016E-4 25 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.010177623653126818 4.471094784032591E-4 26 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.01168367663301148 4.5887551730860803E-4 27 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.018519745237019207 4.7064155621395694E-4 28 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.05694762830188879 4.8240759511930585E-4 29 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.14329858782824453 4.8240759511930585E-4 30 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.26458291686458124 4.8240759511930585E-4 31 1.0589435014814031E-4 8.236227233744247E-5 0.0 0.6805947544410031 4.941736340246548E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 6825 0.0 19.164103 37 AACGCAG 26410 0.0 16.167362 5 GAGTACT 19200 0.0 14.385677 11 CGTTACG 940 0.0 14.367021 24 TCTTATA 11285 0.0 14.344262 37 TCGTTAC 1115 0.0 14.269058 23 ACGCAGA 30110 0.0 14.235968 6 AGTACTT 19630 0.0 14.07998 12 CGCAGAG 30575 0.0 14.0073595 7 AGAGTAC 31230 0.0 13.701728 10 TTAGTAC 490 0.0 13.591836 3 CAGAGTA 32035 0.0 13.4382715 9 GTACTTT 20680 0.0 13.409817 13 TATACAC 2250 0.0 13.320001 37 GTTACGG 1630 0.0 13.27914 25 GCAGAGT 32835 0.0 13.122125 8 TACTTTT 21165 0.0 13.067565 14 CATTACG 725 0.0 13.013793 24 CTCGTTA 1295 0.0 12.857142 22 ACTTTTT 22155 0.0 12.525389 15 >>END_MODULE