##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727306.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7496910 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13288848338849 33.0 31.0 34.0 30.0 34.0 2 32.28132497255536 34.0 31.0 34.0 30.0 34.0 3 32.35984652343432 34.0 31.0 34.0 30.0 34.0 4 35.93559106351817 37.0 35.0 37.0 35.0 37.0 5 35.81484318205767 37.0 35.0 37.0 35.0 37.0 6 35.827744764176174 37.0 35.0 37.0 35.0 37.0 7 35.77079996958747 37.0 35.0 37.0 35.0 37.0 8 35.742267680951215 37.0 35.0 37.0 35.0 37.0 9 37.46799094560292 39.0 37.0 39.0 35.0 39.0 10 37.3046161685281 39.0 37.0 39.0 34.0 39.0 11 37.40985232582491 39.0 37.0 39.0 35.0 39.0 12 37.311038948046594 39.0 37.0 39.0 34.0 39.0 13 37.36698052931141 39.0 37.0 39.0 34.0 39.0 14 38.545424848370864 40.0 38.0 41.0 34.0 41.0 15 38.4999713215178 40.0 38.0 41.0 34.0 41.0 16 38.433977198605824 40.0 38.0 41.0 34.0 41.0 17 38.38459965505788 40.0 38.0 41.0 34.0 41.0 18 38.32798446293206 40.0 38.0 41.0 34.0 41.0 19 38.3260938173194 40.0 38.0 41.0 34.0 41.0 20 38.2020523122193 40.0 38.0 41.0 34.0 41.0 21 38.11984510951846 40.0 38.0 41.0 33.0 41.0 22 38.03972249900292 40.0 38.0 41.0 33.0 41.0 23 37.92157115398211 40.0 37.0 41.0 33.0 41.0 24 37.80678106046358 40.0 37.0 41.0 32.0 41.0 25 37.7192682051672 40.0 37.0 41.0 32.0 41.0 26 37.34164022243831 39.0 37.0 41.0 31.0 41.0 27 37.11907265793507 39.0 36.0 41.0 31.0 41.0 28 36.95416791718188 39.0 36.0 40.0 30.0 41.0 29 36.913724721251825 39.0 36.0 40.0 30.0 41.0 30 36.82673474804953 39.0 36.0 40.0 30.0 41.0 31 36.613980693379006 39.0 36.0 40.0 30.0 41.0 32 36.49838773574713 39.0 36.0 40.0 30.0 41.0 33 36.310825793560284 39.0 35.0 40.0 29.0 41.0 34 36.16838484122125 39.0 35.0 40.0 29.0 41.0 35 36.010240885911664 39.0 35.0 40.0 28.0 41.0 36 35.85755811394294 38.0 35.0 40.0 27.0 41.0 37 35.61353050790259 38.0 35.0 40.0 26.0 41.0 38 35.49437528261644 38.0 35.0 40.0 26.0 41.0 39 35.32201080178367 38.0 34.0 40.0 25.0 41.0 40 35.186414936287086 38.0 34.0 40.0 25.0 41.0 41 35.04667909845523 38.0 34.0 40.0 24.0 41.0 42 34.851011416703685 38.0 33.0 40.0 24.0 41.0 43 31.355378415907353 35.0 28.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 21.0 11 34.0 12 23.0 13 44.0 14 69.0 15 125.0 16 221.0 17 481.0 18 906.0 19 1918.0 20 3920.0 21 7392.0 22 13192.0 23 21028.0 24 31536.0 25 44620.0 26 59605.0 27 78835.0 28 100611.0 29 126802.0 30 157940.0 31 196720.0 32 243027.0 33 303830.0 34 388502.0 35 509271.0 36 707731.0 37 1098010.0 38 1978756.0 39 1421735.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.83111308525779 18.043460572422504 12.251247513975757 26.874178828343943 2 19.273700764715063 20.63904995524823 33.745356420178446 26.341892859858262 3 18.977778844884092 21.401564111080432 30.15239612053499 29.468260923500484 4 15.282016190670555 15.324353633697083 32.52473352354504 36.86889665208732 5 14.95377428834013 36.489873828017146 33.712502884521754 14.84384899912097 6 37.37573213497294 34.26597091334963 13.72067958665637 14.637617365021056 7 30.99926503052591 30.261627790649747 19.45556235835831 19.28354482046603 8 28.691327493594027 34.314430878855426 18.242649304846932 18.75159232270362 9 27.276677991332427 13.318847365114427 17.503344711354412 41.901129932198735 10 16.07443600096573 27.171354598094418 33.057312946267196 23.696896454672657 11 38.27446241184702 20.437033391090463 20.408074793481582 20.88042940358094 12 22.21794045813542 24.4567028282319 29.08670372193344 24.238652991699247 13 32.52293278163937 18.983514541324357 22.822442846452738 25.671109830583532 14 23.04789573304201 19.45526890412183 24.592665511524082 32.904169851312076 15 26.408573665683594 27.274863910597837 20.791792885335425 25.524769538383147 16 25.856186081999116 25.41768541972626 22.920056396568718 25.8060721017059 17 25.310347863319688 25.55715621502726 24.209654377603574 24.922841544049483 18 25.297796025295753 24.806260179193828 24.627426499717885 25.26851729579253 19 26.287523793136103 24.805139717563637 24.56766854610766 24.339667943192595 20 25.932430828167874 24.558784886039714 24.37481575742539 25.133968528367017 21 25.609271019660103 24.714288953715595 24.40564179108459 25.27079823553971 22 26.28133457651219 24.29753058260003 23.91744065221538 25.503694188672398 23 25.65448964973569 24.362143869941082 24.158233192075134 25.825133288248093 24 25.605135982691536 24.287139634862896 24.174079720844986 25.93364466160058 25 25.84730242193117 24.004476510989196 24.28826009649309 25.85996097058655 26 25.480297882727683 24.320820177913298 24.511618786940222 25.687263152418797 27 25.860254424823026 24.52599804452768 24.223153272481596 25.3905942581677 28 25.69782750493203 24.6386311160198 24.22703487170047 25.436506507347694 29 25.527530675971832 24.827655660798918 24.372107975152428 25.27270568807682 30 25.686876326379803 24.641578997213518 24.172599110833666 25.498945565573017 31 25.654022790723115 24.164208987436155 24.28904708740001 25.89272113444072 32 25.218189894236424 24.539110113366707 24.375029178688287 25.867670813708582 33 25.40560044071491 24.09680788484856 24.419754272093435 26.0778374023431 34 25.634934926523062 24.000848349520002 24.785838432100693 25.578378291856247 35 25.43303841182567 24.048854794842143 24.746795679820085 25.771311113512102 36 25.154070143565814 23.647996307812154 25.211787256349616 25.986146292272416 37 24.992750346476083 23.379525697920876 25.436413135545177 26.19131082005786 38 24.635443135905327 23.378431913948546 25.88955983198411 26.09656511816202 39 24.462585251790404 23.14666976127498 26.409534061366617 25.981210925568 40 24.647621486719196 22.94712088046942 26.625369652296747 25.779887980514637 41 24.125179573984482 23.009226467971473 26.980582666725354 25.885011291318687 42 23.821414422742173 23.05735296275399 26.980876120961838 26.140356493542004 43 23.96204569616015 22.258463820427348 26.904538002990563 26.874952480421932 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 400.0 1 469.5 2 539.0 3 1405.0 4 2271.0 5 2271.0 6 2623.5 7 2976.0 8 2990.0 9 3004.0 10 4403.0 11 5802.0 12 5802.0 13 12085.5 14 18369.0 15 31529.5 16 44690.0 17 32878.5 18 21067.0 19 21067.0 20 25778.5 21 30490.0 22 27528.5 23 24567.0 24 31803.0 25 39039.0 26 39039.0 27 49461.5 28 59884.0 29 71975.0 30 84066.0 31 101653.0 32 119240.0 33 119240.0 34 142020.0 35 164800.0 36 194928.5 37 225057.0 38 262839.5 39 300622.0 40 300622.0 41 341870.5 42 383119.0 43 426866.5 44 470614.0 45 516702.5 46 562791.0 47 562791.0 48 606960.0 49 651129.0 50 672714.0 51 694299.0 52 693198.5 53 692098.0 54 692098.0 55 665493.0 56 638888.0 57 605482.0 58 572076.0 59 530102.0 60 488128.0 61 488128.0 62 431166.0 63 374204.0 64 321753.5 65 269303.0 66 226630.5 67 183958.0 68 183958.0 69 153841.5 70 123725.0 71 105057.5 72 86390.0 73 71787.5 74 57185.0 75 57185.0 76 47718.5 77 38252.0 78 31898.5 79 25545.0 80 20780.0 81 16015.0 82 16015.0 83 12756.5 84 9498.0 85 7626.5 86 5755.0 87 4742.0 88 3729.0 89 3729.0 90 2799.5 91 1870.0 92 1377.5 93 885.0 94 628.0 95 371.0 96 371.0 97 255.0 98 139.0 99 100.0 100 61.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7496910.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.77229305643727 #Duplication Level Percentage of deduplicated Percentage of total 1 80.32456433854452 44.79885141919955 2 10.093164675350598 11.258378762810683 3 3.476708927042342 5.817120874528112 4 1.7038416467845916 3.801086225849317 5 0.9921929464423159 2.76684378887554 6 0.6522649632704386 2.182698760917912 7 0.4623353749969366 1.8049852817280876 8 0.34845915328064836 1.5547492811973052 9 0.2609048544635305 1.3096135802688424 >10 1.533333305373129 15.918799647404953 >50 0.11514304719952562 4.3594791024579065 >100 0.03620198991661124 3.3048018666553824 >500 6.456798177256236E-4 0.23682629187267565 >1k 1.4345851511890612E-4 0.13295011758442968 >5k 7.172925137882103E-5 0.3534579366245366 >10k+ 2.390975045960701E-5 0.39935706202488586 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29948 0.39947124882118096 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9827 0.1310806719034909 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9469 0.1263053711462456 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3338828930852844E-5 2 0.0 0.0 0.0 0.0 1.3338828930852844E-5 3 0.0 0.0 0.0 0.0 1.3338828930852844E-5 4 0.0 0.0 0.0 0.0 1.3338828930852844E-5 5 0.0 0.0 0.0 0.0 1.3338828930852844E-5 6 0.0 0.0 0.0 0.0 5.335531572341138E-5 7 0.0 0.0 0.0 0.0 6.669414465426423E-5 8 0.0 0.0 0.0 0.0 6.669414465426423E-5 9 0.0 0.0 0.0 0.0 9.337180251596991E-5 10 1.3338828930852844E-5 0.0 0.0 0.0 9.337180251596991E-5 11 1.3338828930852844E-5 0.0 0.0 1.3338828930852844E-5 9.337180251596991E-5 12 1.3338828930852844E-5 0.0 0.0 2.667765786170569E-5 9.337180251596991E-5 13 1.3338828930852844E-5 1.3338828930852844E-5 0.0 5.335531572341138E-5 9.337180251596991E-5 14 1.3338828930852844E-5 1.3338828930852844E-5 0.0 5.335531572341138E-5 1.6006594717023412E-4 15 1.3338828930852844E-5 2.667765786170569E-5 0.0 9.337180251596991E-5 1.6006594717023412E-4 16 2.667765786170569E-5 2.667765786170569E-5 0.0 1.7340477610108698E-4 2.667765786170569E-4 17 4.001648679255853E-5 2.667765786170569E-5 0.0 2.8011540754790975E-4 2.667765786170569E-4 18 4.001648679255853E-5 2.667765786170569E-5 0.0 3.7348721006387963E-4 3.3347072327132113E-4 19 8.003297358511706E-5 2.667765786170569E-5 0.0 5.20214328303261E-4 3.3347072327132113E-4 20 8.003297358511706E-5 2.667765786170569E-5 0.0 7.869909069203178E-4 3.4680955220217397E-4 21 8.003297358511706E-5 2.667765786170569E-5 0.0 0.001280527577361873 4.26842525787291E-4 22 8.003297358511706E-5 2.667765786170569E-5 0.0 0.0020941961421438965 4.26842525787291E-4 23 8.003297358511706E-5 4.001648679255853E-5 0.0 0.0025343774968620406 5.735696440266723E-4 24 8.003297358511706E-5 4.001648679255853E-5 0.0 0.0034014013773674755 6.00247301888378E-4 25 8.003297358511706E-5 4.001648679255853E-5 0.0 0.0038282439031547665 6.135861308192308E-4 26 8.003297358511706E-5 4.001648679255853E-5 0.0 0.004628573639005937 6.135861308192308E-4 27 8.003297358511706E-5 4.001648679255853E-5 0.0 0.00829675159499047 6.135861308192308E-4 28 8.003297358511706E-5 4.001648679255853E-5 0.0 0.030732661856684954 6.135861308192308E-4 29 8.003297358511706E-5 4.001648679255853E-5 0.0 0.08391457280399525 6.135861308192308E-4 30 8.003297358511706E-5 4.001648679255853E-5 0.0 0.16145318537904282 6.135861308192308E-4 31 8.003297358511706E-5 4.001648679255853E-5 0.0 0.43501922792190384 6.269249597500837E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3950 0.0 17.750633 37 TCTTATA 6925 0.0 16.589891 37 AACGCAG 13055 0.0 16.31061 5 ACGCAGA 14910 0.0 14.318579 6 TATACCG 350 0.0 14.271428 5 AGAGTAC 15715 0.0 13.596882 10 CGCAGAG 15960 0.0 13.492481 7 GAGTACT 8870 0.0 13.410935 11 CAGAGTA 16330 0.0 13.345376 9 CTCTTAT 10925 0.0 13.208238 37 AGTACTT 9205 0.0 12.942965 12 GGTATCA 8695 0.0 12.936171 1 TAGATCG 315 0.0 12.920634 5 TAGTACT 670 0.0 12.701492 4 CAACGCA 16770 0.0 12.609123 4 TCAACGC 16910 0.0 12.548492 3 GTACTTT 9430 0.0 12.516437 13 GCAGAGT 17295 0.0 12.515178 8 ATCAACG 17100 0.0 12.376608 2 TATCAAC 17110 0.0 12.326125 1 >>END_MODULE