##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727304.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4695224 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13458442025343 33.0 31.0 34.0 30.0 34.0 2 32.28229025920808 34.0 31.0 34.0 30.0 34.0 3 32.364227564009724 34.0 31.0 34.0 30.0 34.0 4 35.94426996454269 37.0 35.0 37.0 35.0 37.0 5 35.82142981889682 37.0 35.0 37.0 35.0 37.0 6 35.836005055349865 37.0 35.0 37.0 35.0 37.0 7 35.78418537645914 37.0 35.0 37.0 35.0 37.0 8 35.75798662641016 37.0 35.0 37.0 35.0 37.0 9 37.4847892241137 39.0 37.0 39.0 35.0 39.0 10 37.32426397547806 39.0 37.0 39.0 34.0 39.0 11 37.42873375157394 39.0 37.0 39.0 35.0 39.0 12 37.3333263759088 39.0 37.0 39.0 34.0 39.0 13 37.39094066651559 39.0 37.0 39.0 34.0 39.0 14 38.57505477906911 40.0 38.0 41.0 34.0 41.0 15 38.53634586976042 40.0 38.0 41.0 34.0 41.0 16 38.477848341208 40.0 38.0 41.0 34.0 41.0 17 38.43202901501611 40.0 38.0 41.0 34.0 41.0 18 38.381999240078855 40.0 38.0 41.0 34.0 41.0 19 38.38320109967064 40.0 38.0 41.0 34.0 41.0 20 38.27081924099894 40.0 38.0 41.0 34.0 41.0 21 38.19506204602805 40.0 38.0 41.0 34.0 41.0 22 38.12128324442029 40.0 38.0 41.0 33.0 41.0 23 38.01174470057233 40.0 38.0 41.0 33.0 41.0 24 37.90940091463155 40.0 37.0 41.0 33.0 41.0 25 37.82514508359984 40.0 37.0 41.0 33.0 41.0 26 37.4725063170575 39.0 37.0 41.0 32.0 41.0 27 37.26693444231841 39.0 37.0 41.0 31.0 41.0 28 37.1278215906206 39.0 36.0 40.0 31.0 41.0 29 37.09570618994962 39.0 36.0 40.0 31.0 41.0 30 37.01651593193424 39.0 36.0 40.0 31.0 41.0 31 36.822580562716496 39.0 36.0 40.0 30.0 41.0 32 36.71752785383615 39.0 36.0 40.0 30.0 41.0 33 36.54056164306538 39.0 36.0 40.0 30.0 41.0 34 36.41728701335655 39.0 35.0 40.0 30.0 41.0 35 36.27275738069153 39.0 35.0 40.0 29.0 41.0 36 36.135007403267664 39.0 35.0 40.0 29.0 41.0 37 35.90151950151899 38.0 35.0 40.0 27.0 41.0 38 35.793895243336635 38.0 35.0 40.0 27.0 41.0 39 35.63512709936736 38.0 35.0 40.0 26.0 41.0 40 35.5066252430129 38.0 35.0 40.0 26.0 41.0 41 35.37725953010975 38.0 34.0 40.0 26.0 41.0 42 35.18850921702564 38.0 34.0 40.0 25.0 41.0 43 31.759845323673588 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 12.0 11 13.0 12 16.0 13 11.0 14 25.0 15 46.0 16 102.0 17 194.0 18 406.0 19 908.0 20 1837.0 21 3598.0 22 6399.0 23 10744.0 24 16596.0 25 23834.0 26 32856.0 27 43887.0 28 56959.0 29 73607.0 30 93276.0 31 117481.0 32 146740.0 33 185462.0 34 239998.0 35 318393.0 36 442766.0 37 696216.0 38 1270019.0 39 912822.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.49379795298371 18.693250843836204 12.484516180697662 26.32843502248242 2 18.98865741016829 20.934975626295998 34.095242314317694 25.981124649218014 3 19.01662199716137 21.786777372070002 30.29039722066508 28.906203410103544 4 15.212138973561217 15.679145446521828 32.73539239022462 36.373323189692336 5 14.795204659032244 36.58110880332866 33.90396283542596 14.719723702213141 6 36.96096288483787 34.53952356692673 13.968577431023524 14.530936117211873 7 30.468940353005525 30.404577076620836 19.87351402190822 19.252968548465418 8 28.126943464252186 34.74549883030075 18.4535391708681 18.674018534578966 9 26.681133850056995 13.626676810307666 18.128783632048226 41.563405707587116 10 15.950059038716791 27.611121428924374 33.54698306193698 22.891836470421858 11 37.67364453751301 20.78418409856484 20.785249010483845 20.756922353438302 12 21.8065847337635 24.785910107803165 29.6773274288937 23.730177729539633 13 32.008590005503464 19.44999855171979 23.222086954743798 25.319324488032947 14 22.779296578821373 19.999067137158953 24.969884290930526 32.251751993089144 15 25.721563018079646 27.82795879387224 21.25951818273207 25.190960005316036 16 25.456463844962457 25.87420749254988 23.35145245466457 25.317876207823097 17 24.6216367951774 26.18350051030579 24.854383944195206 24.340478750321605 18 24.811723572719853 25.3615588947407 25.169065416261287 24.657652116278157 19 25.607532249792552 25.329185572402935 25.2309367987555 23.83234537904901 20 25.384624886906355 25.205762280990214 24.971758535907977 24.437854296195454 21 25.082956638490515 25.20750873653738 24.905819189883164 24.803715435088932 22 25.607638740984456 24.900324244381096 24.589902419991038 24.902134594643407 23 25.16934229336023 24.884265372642496 24.69013192980782 25.25626040418945 24 25.1826536923478 24.865246045769062 24.675840811854773 25.27625945002837 25 25.366713068428687 24.621274725124938 24.805121118822022 25.20689108762436 26 24.99182147646204 24.92445514846576 24.996996948388407 25.086726426683796 27 25.112710277507528 25.10566056060371 24.84920847226884 24.93242068961992 28 25.223461117084085 25.11505308372934 24.835492406752053 24.825993392434526 29 25.002577086843992 25.349674477724598 24.939342617093455 24.70840581833795 30 25.096246739239703 25.194431618171997 24.81498220319201 24.894339439396287 31 25.15089801892306 24.748233524108755 24.853787593520565 25.247080863447625 32 24.716712131306195 25.086982005544357 24.907672136622235 25.28863372652721 33 24.86247727477965 24.683210002334288 24.927223919455173 25.527088803430892 34 25.066322714315653 24.475104915122262 25.274725976865003 25.183846393697085 35 24.860965099854663 24.51544377861418 25.365626858271302 25.257964263259858 36 24.71971518291779 24.189793713782347 25.68365215376306 25.40683894953681 37 24.497681047805173 23.791261077213782 26.051004169343145 25.660053705637896 38 24.112417213747417 23.839757166005285 26.513644503435827 25.534181116811467 39 23.96373421161589 23.620875170172926 26.978691538465473 25.43669907974572 40 24.11680465085372 23.611269664663496 27.146777235761277 25.125148448721507 41 23.654249509714553 23.499965070889058 27.478987158014185 25.366798261382208 42 23.351069086373727 23.699380476842 27.346916781819143 25.60263365496513 43 23.5161943285347 23.014407832299373 27.335224048948465 26.134173790217464 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 721.0 1 668.0 2 615.0 3 1223.0 4 1831.0 5 1831.0 6 2083.0 7 2335.0 8 2446.0 9 2557.0 10 3829.0 11 5101.0 12 5101.0 13 10052.0 14 15003.0 15 23219.0 16 31435.0 17 24144.0 18 16853.0 19 16853.0 20 20803.5 21 24754.0 22 22958.5 23 21163.0 24 26044.5 25 30926.0 26 30926.0 27 38019.5 28 45113.0 29 53106.5 30 61100.0 31 72853.5 32 84607.0 33 84607.0 34 99537.0 35 114467.0 36 133536.5 37 152606.0 38 176035.0 39 199464.0 40 199464.0 41 225924.0 42 252384.0 43 281305.0 44 310226.0 45 336131.0 46 362036.0 47 362036.0 48 387717.5 49 413399.0 50 424045.0 51 434691.0 52 431479.0 53 428267.0 54 428267.0 55 413322.5 56 398378.0 57 372644.5 58 346911.0 59 319768.5 60 292626.0 61 292626.0 62 255847.5 63 219069.0 64 184761.0 65 150453.0 66 125063.0 67 99673.0 68 99673.0 69 82410.5 70 65148.0 71 53597.0 72 42046.0 73 34305.5 74 26565.0 75 26565.0 76 21817.5 77 17070.0 78 13893.0 79 10716.0 80 8591.0 81 6466.0 82 6466.0 83 5132.5 84 3799.0 85 2983.0 86 2167.0 87 1749.5 88 1332.0 89 1332.0 90 993.5 91 655.0 92 470.5 93 286.0 94 218.0 95 150.0 96 150.0 97 96.0 98 42.0 99 30.0 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4695224.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.29024634328351 #Duplication Level Percentage of deduplicated Percentage of total 1 80.27499834674848 47.595244271853936 2 10.355792732435335 12.27995004372152 3 3.6561751577095207 6.5032657732437285 4 1.6700631244126691 3.960738162210436 5 0.9667292739371508 2.8658808399498636 6 0.6210578680397146 2.2093604393705486 7 0.43222112378853655 1.7938547832935217 8 0.33033454736159185 1.566849335101267 9 0.24645712784303306 1.3151253440584394 >10 1.3578100699735416 14.526331363705994 >50 0.07077647813641187 2.815618353066676 >100 0.0171523526070492 1.567493936639518 >500 2.158985276746546E-4 0.10573358417721368 >1k 7.196615976489352E-5 0.07518262542561199 >5k 1.0794923964734027E-4 0.41286440613973974 >10k+ 3.598307988244676E-5 0.4065067380418872 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19054 0.4058166340945608 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7493 0.15958770018214252 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6844 0.145765143473453 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5015 0.10681066547623713 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.259647676021421E-5 2 0.0 0.0 0.0 0.0 4.259647676021421E-5 3 0.0 0.0 0.0 0.0 4.259647676021421E-5 4 0.0 0.0 0.0 0.0 4.259647676021421E-5 5 0.0 0.0 0.0 0.0 4.259647676021421E-5 6 0.0 0.0 0.0 0.0 4.259647676021421E-5 7 0.0 0.0 0.0 0.0 4.259647676021421E-5 8 0.0 0.0 0.0 0.0 6.389471514032132E-5 9 0.0 0.0 0.0 0.0 8.519295352042842E-5 10 0.0 0.0 0.0 0.0 8.519295352042842E-5 11 0.0 0.0 0.0 0.0 8.519295352042842E-5 12 0.0 0.0 0.0 0.0 1.0649119190053552E-4 13 0.0 0.0 0.0 0.0 1.2778943028064264E-4 14 0.0 0.0 0.0 2.1298238380107105E-5 2.1298238380107104E-4 15 2.1298238380107105E-5 0.0 0.0 8.519295352042842E-5 2.1298238380107104E-4 16 2.1298238380107105E-5 0.0 0.0 1.0649119190053552E-4 2.768770989413924E-4 17 2.1298238380107105E-5 0.0 0.0 2.555788605612853E-4 2.768770989413924E-4 18 2.1298238380107105E-5 0.0 0.0 2.768770989413924E-4 3.194735757016066E-4 19 4.259647676021421E-5 2.1298238380107105E-5 0.0 3.407718140817137E-4 3.194735757016066E-4 20 4.259647676021421E-5 2.1298238380107105E-5 0.0 4.472630059822492E-4 3.620700524618208E-4 21 4.259647676021421E-5 2.1298238380107105E-5 0.0 6.815436281634274E-4 3.620700524618208E-4 22 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.0010862101573854623 3.620700524618208E-4 23 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.0013630872563268547 3.620700524618208E-4 24 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.0019381396925897466 3.833682908419279E-4 25 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.002236315029911246 3.833682908419279E-4 26 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.003066946326735423 4.04666529222035E-4 27 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.008306312968241771 4.04666529222035E-4 28 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.033502128971908476 4.04666529222035E-4 29 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.08517165528204831 4.259647676021421E-4 30 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.15752177105927215 4.259647676021421E-4 31 6.389471514032132E-5 2.1298238380107105E-5 0.0 0.43030960823168396 4.685612443623563E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2475 0.0 17.41616 37 AACGCAG 7805 0.0 15.951954 5 TCTTATA 4275 0.0 15.189473 37 TATACCG 170 2.4421752E-8 14.1470585 5 ACGCAGA 8990 0.0 13.890433 6 TTACGCG 80 0.0063024396 13.875 3 CTCTTAT 7060 0.0 13.80949 37 GTATTAA 705 0.0 13.6453905 1 CGCAGAG 9310 0.0 13.432868 7 AGAGTAC 9475 0.0 13.159894 10 GAGTACT 6035 0.0 12.936206 11 GTATTAG 460 0.0 12.869565 1 GTATAAG 620 0.0 12.830646 1 CAGAGTA 9955 0.0 12.729783 9 GGTATCA 5280 0.0 12.578598 1 CTAGTAC 325 0.0 12.523077 3 GTATAAA 665 0.0 12.518797 1 ATACCGT 300 1.8189894E-12 12.333333 6 CAACGCA 10070 0.0 12.308839 4 GCAGAGT 10440 0.0 12.209291 8 >>END_MODULE