##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727300.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1565969 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.376119195207565 33.0 31.0 34.0 31.0 34.0 2 32.50934916336147 34.0 31.0 34.0 31.0 34.0 3 32.60050486312309 34.0 31.0 34.0 31.0 34.0 4 36.117073198767024 37.0 35.0 37.0 35.0 37.0 5 35.93242075673273 37.0 35.0 37.0 35.0 37.0 6 35.95729481234942 37.0 35.0 37.0 35.0 37.0 7 35.91956226464253 37.0 35.0 37.0 35.0 37.0 8 35.88087375931452 37.0 35.0 37.0 35.0 37.0 9 37.72343769257246 39.0 37.0 39.0 35.0 39.0 10 37.55320443763574 39.0 37.0 39.0 35.0 39.0 11 37.66446079073085 39.0 37.0 39.0 35.0 39.0 12 37.597985656165605 39.0 37.0 39.0 35.0 39.0 13 37.67767752746063 39.0 37.0 39.0 35.0 39.0 14 38.88639047133117 40.0 38.0 41.0 36.0 41.0 15 38.81284239981762 40.0 38.0 41.0 35.0 41.0 16 38.77838769477557 40.0 38.0 41.0 35.0 41.0 17 38.738975037181454 40.0 38.0 41.0 35.0 41.0 18 38.72202706439272 40.0 38.0 41.0 35.0 41.0 19 38.777712713342346 40.0 38.0 41.0 35.0 41.0 20 38.743272057109685 40.0 38.0 41.0 35.0 41.0 21 38.7008618944564 40.0 38.0 41.0 35.0 41.0 22 38.65291075366115 40.0 38.0 41.0 34.0 41.0 23 38.580489779810456 40.0 38.0 41.0 34.0 41.0 24 38.53977569160054 40.0 38.0 41.0 34.0 41.0 25 38.42208370663787 40.0 38.0 41.0 34.0 41.0 26 38.30548944455478 40.0 38.0 41.0 34.0 41.0 27 38.200597840697995 40.0 38.0 41.0 34.0 41.0 28 38.0903523632971 40.0 38.0 41.0 33.0 41.0 29 37.98044661165068 40.0 37.0 41.0 33.0 41.0 30 37.89496343797355 40.0 37.0 41.0 33.0 41.0 31 37.76518692260191 40.0 37.0 41.0 33.0 41.0 32 37.64727079527117 40.0 37.0 41.0 33.0 41.0 33 37.53172189232354 40.0 36.0 41.0 33.0 41.0 34 37.40446777682062 40.0 36.0 41.0 33.0 41.0 35 37.31298065287372 40.0 36.0 41.0 32.0 41.0 36 37.18241293410023 39.0 36.0 41.0 32.0 41.0 37 37.08152524092112 39.0 36.0 41.0 31.0 41.0 38 36.95632033584317 39.0 36.0 41.0 31.0 41.0 39 36.80719669418743 39.0 35.0 41.0 31.0 41.0 40 36.65763051503574 39.0 35.0 41.0 30.0 41.0 41 36.50807136028874 39.0 35.0 41.0 30.0 41.0 42 36.35932831365116 39.0 35.0 41.0 30.0 41.0 43 34.69331512948213 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 10.0 11 9.0 12 5.0 13 1.0 14 4.0 15 3.0 16 12.0 17 15.0 18 38.0 19 82.0 20 178.0 21 325.0 22 666.0 23 1154.0 24 2112.0 25 3494.0 26 5299.0 27 8195.0 28 12016.0 29 16932.0 30 22171.0 31 28392.0 32 36620.0 33 48701.0 34 65406.0 35 90711.0 36 134544.0 37 228770.0 38 419040.0 39 441059.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.77259766955795 17.219625675859483 12.86602736069488 25.141749293887685 2 16.28582685864152 21.673481403527145 37.20354617492428 24.837145562907057 3 18.633638341499736 23.297268336729527 31.232482890785196 26.83661043098554 4 13.257669851702044 14.90891582144985 35.11895829355498 36.714456033293125 5 14.222248333140694 37.992003673125076 34.38963351126363 13.396114482470598 6 34.81339668920649 36.06099482173658 14.744417035075408 14.381191453981529 7 28.88250022829315 31.382549718417156 21.545190230457948 18.189759822831743 8 27.96983848339271 36.54114481193433 19.083583391497534 16.405433313175422 9 27.074865466685484 13.679389566460129 18.652859667081533 40.59288529977286 10 14.779602916788262 28.374955059774493 34.243589751776696 22.60185227166055 11 36.404041203880794 21.659496452356336 21.55655699442326 20.379905349339612 12 20.67416404794731 25.72617976473353 31.66410063034453 21.935555556974627 13 31.924642186403435 19.10044196277193 25.047111405142758 23.927804445681875 14 21.322133452194773 19.79106866100159 28.450180048264045 30.436617838539586 15 25.23089537532352 28.466400037293205 23.10441649866632 23.198288088716954 16 23.236539165206974 26.47587532064811 25.68556593393611 24.602019580208804 17 23.228556887141444 26.925437221298758 27.040637458340488 22.805368433219304 18 23.03710993001777 26.150900816044253 27.83758810040301 22.974401153534966 19 24.305525843742757 26.41987165774035 27.648823188709354 21.625779309807537 20 23.0893459576786 26.290367178405194 27.550417664717504 23.069869199198706 21 22.556576790472864 26.953917989436572 28.032994267447187 22.45651095264338 22 23.421919591000844 25.998088084757743 27.027674238762074 23.552318085479342 23 22.57203048080773 26.114437769840908 27.720472116625555 23.593059632725808 24 22.6293751664305 25.887230206983663 27.993274451793106 23.490120174792732 25 23.05818314411077 26.009135557600437 27.422509640995447 23.510171657293345 26 22.622670052855455 26.290367178405194 28.189574633980623 22.897388134758735 27 23.565792170853957 26.76445063727315 27.518680127128953 22.151077064743937 28 22.896047112043725 27.219440487008363 27.065350591231375 22.81916180971654 29 22.555618917105 27.14932415648075 27.831074561501534 22.463982364912717 30 23.084875881961903 26.88686685368612 27.47781086343344 22.550446400918535 31 22.61283588627872 26.284683796422538 27.935865907945818 23.16661440935293 32 22.185113498415358 26.94574413669747 27.630687452944468 23.238454911942704 33 22.63224878653409 26.16514120011316 27.649334054505548 23.553275958847205 34 22.86360713398541 26.473576424565238 28.256370336832976 22.406446104616375 35 22.71992612880587 26.562530931327505 27.751379497295286 22.966163442571343 36 22.459001423399823 26.183340794102566 28.279550872335275 23.078106910162333 37 21.950115232166155 26.10932911187897 28.312693290863354 23.627862365091516 38 22.4444417482083 25.890039968862727 28.40592629866875 23.259591984260226 39 21.7655649632911 25.905302084524024 29.06628419847392 23.26284875371096 40 22.528926179253865 25.644696670240595 28.910406272410246 22.915970878095287 41 21.86754654785631 25.64546296893489 29.076948521969463 23.410041961239337 42 21.413706146162536 25.815070413271275 29.049681060097615 23.72154238046858 43 20.96829503010596 25.27910833483932 28.963280882316315 24.7893157527384 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 207.0 1 306.5 2 406.0 3 1984.5 4 3563.0 5 3563.0 6 4613.5 7 5664.0 8 5168.5 9 4673.0 10 6081.0 11 7489.0 12 7489.0 13 11594.0 14 15699.0 15 24738.5 16 33778.0 17 26663.5 18 19549.0 19 19549.0 20 20568.5 21 21588.0 22 17101.5 23 12615.0 24 14943.5 25 17272.0 26 17272.0 27 20315.0 28 23358.0 29 26270.5 30 29183.0 31 32570.0 32 35957.0 33 35957.0 34 40552.5 35 45148.0 36 51285.5 37 57423.0 38 64306.0 39 71189.0 40 71189.0 41 78414.0 42 85639.0 43 93162.0 44 100685.0 45 109896.5 46 119108.0 47 119108.0 48 127752.0 49 136396.0 50 138354.0 51 140312.0 52 138023.5 53 135735.0 54 135735.0 55 124852.5 56 113970.0 57 103255.0 58 92540.0 59 84372.0 60 76204.0 61 76204.0 62 66273.0 63 56342.0 64 47309.5 65 38277.0 66 31759.5 67 25242.0 68 25242.0 69 20544.5 70 15847.0 71 12994.0 72 10141.0 73 8220.0 74 6299.0 75 6299.0 76 4992.0 77 3685.0 78 2980.5 79 2276.0 80 1763.0 81 1250.0 82 1250.0 83 957.0 84 664.0 85 500.5 86 337.0 87 256.5 88 176.0 89 176.0 90 113.0 91 50.0 92 36.5 93 23.0 94 16.0 95 9.0 96 9.0 97 4.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1565969.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.85860124685036 #Duplication Level Percentage of deduplicated Percentage of total 1 83.83221114311895 51.85743320743962 2 8.710446161657758 10.776320315922913 3 2.8063383854184036 5.207885014419808 4 1.3581944991554857 3.360640477556994 5 0.800692653318404 2.476486378145288 6 0.5317764006272268 1.9736966591330982 7 0.3698922410307882 1.6016711649559174 8 0.2606610832983835 1.28993040098614 9 0.1917486935412352 1.0675175376034602 >10 1.0562095374084377 11.35749346295202 >50 0.05298069831188733 2.245070406090083 >100 0.026367053374947932 3.009971205925311 >500 0.0013441186081362025 0.5728071384723974 >1k 8.271499126992015E-4 1.0977737522041344 >5k 2.0678747817480037E-4 0.8878638562163711 >10k+ 1.0339373908740019E-4 1.2174390219765612 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19035 1.2155413038189133 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7136 0.45569229020497853 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6746 0.4307875826405248 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4953 0.316289786068562 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2504 0.1599009942086976 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2276 0.14534131901717084 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1903 0.1215222012696292 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 1672 0.10677095140452972 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1585 0.10121528587092082 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 6.385822452424026E-5 9 6.385822452424026E-5 0.0 0.0 6.385822452424026E-5 6.385822452424026E-5 10 6.385822452424026E-5 0.0 0.0 6.385822452424026E-5 6.385822452424026E-5 11 6.385822452424026E-5 0.0 0.0 1.2771644904848052E-4 6.385822452424026E-5 12 6.385822452424026E-5 0.0 0.0 1.9157467357272079E-4 6.385822452424026E-5 13 6.385822452424026E-5 0.0 0.0 2.5543289809696105E-4 6.385822452424026E-5 14 6.385822452424026E-5 0.0 0.0 3.192911226212013E-4 1.2771644904848052E-4 15 6.385822452424026E-5 0.0 0.0 7.662986942908831E-4 2.5543289809696105E-4 16 6.385822452424026E-5 0.0 0.0 0.0011494480414363248 3.192911226212013E-4 17 6.385822452424026E-5 0.0 0.0 0.0015325973885817663 3.192911226212013E-4 18 6.385822452424026E-5 0.0 0.0 0.001724172062154487 3.8314934714544157E-4 19 6.385822452424026E-5 0.0 0.0 0.0025543289809696105 3.8314934714544157E-4 20 1.2771644904848052E-4 0.0 0.0 0.004086926369551377 5.108657961939221E-4 21 1.2771644904848052E-4 0.0 0.0 0.00727983759576339 5.108657961939221E-4 22 1.9157467357272079E-4 0.0 0.0 0.013346368925566215 5.108657961939221E-4 23 1.9157467357272079E-4 0.0 0.0 0.016666996600826708 6.385822452424026E-4 24 1.9157467357272079E-4 0.0 0.0 0.02413840887016282 6.385822452424026E-4 25 1.9157467357272079E-4 0.0 0.0 0.028353051688762676 6.385822452424026E-4 26 1.9157467357272079E-4 0.0 0.0 0.03493044881475942 7.024404697666429E-4 27 1.9157467357272079E-4 0.0 0.0 0.05191673653820733 7.024404697666429E-4 28 1.9157467357272079E-4 0.0 0.0 0.1517909996941191 7.024404697666429E-4 29 1.9157467357272079E-4 0.0 0.0 0.3403004784896764 7.024404697666429E-4 30 1.9157467357272079E-4 0.0 0.0 0.5682743400412141 7.024404697666429E-4 31 1.9157467357272079E-4 0.0 0.0 1.1076209043729475 7.024404697666429E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 35 2.3888571E-5 31.714287 5 CGCTACG 70 1.2195553E-4 18.5 10 TGTTACG 155 2.1827873E-11 17.903227 24 TATACAC 780 0.0 16.602564 37 TACACCG 90 4.4476146E-5 16.444443 5 CTTATAC 2000 0.0 15.910001 37 TAGACTG 215 0.0 15.488372 5 GTACTTA 610 0.0 15.163935 30 GTATTAC 125 2.960218E-6 14.800001 1 GAGTGTC 650 0.0 14.8 7 GTATACG 75 0.004105289 14.8 1 CGATAGC 75 0.004105289 14.8 4 TCTATAC 200 6.184564E-11 14.799999 3 TACTTAC 565 0.0 14.734512 31 GTATTAT 165 1.6460035E-8 14.575757 1 AGTGTCT 775 0.0 14.56129 8 GTTACGG 445 0.0 14.550561 25 TACTCCG 140 5.998336E-7 14.535715 5 CGTTACG 295 0.0 14.423729 24 CTAGGAC 270 0.0 14.388889 3 >>END_MODULE