##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727299.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9103701 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08376439428316 33.0 31.0 34.0 30.0 34.0 2 32.2343530394946 33.0 31.0 34.0 30.0 34.0 3 32.31563273002925 34.0 31.0 34.0 30.0 34.0 4 35.909552170046005 37.0 35.0 37.0 35.0 37.0 5 35.778847196321585 37.0 35.0 37.0 35.0 37.0 6 35.79260742416738 37.0 35.0 37.0 35.0 37.0 7 35.73490737448429 37.0 35.0 37.0 35.0 37.0 8 35.70134498046454 37.0 35.0 37.0 33.0 37.0 9 37.43271357440232 39.0 37.0 39.0 35.0 39.0 10 37.26093904006733 39.0 37.0 39.0 34.0 39.0 11 37.37317789764844 39.0 37.0 39.0 34.0 39.0 12 37.267065119998996 39.0 37.0 39.0 34.0 39.0 13 37.32816137085346 39.0 37.0 39.0 34.0 39.0 14 38.481027441476826 40.0 38.0 41.0 34.0 41.0 15 38.43780216419674 40.0 38.0 41.0 34.0 41.0 16 38.367168912950895 40.0 38.0 41.0 34.0 41.0 17 38.31577739646766 40.0 38.0 41.0 34.0 41.0 18 38.266724489303854 40.0 38.0 41.0 33.0 41.0 19 38.265159191849555 40.0 38.0 41.0 34.0 41.0 20 38.145814433053104 40.0 38.0 41.0 33.0 41.0 21 38.06566461266687 40.0 38.0 41.0 33.0 41.0 22 37.98802003712556 40.0 37.0 41.0 33.0 41.0 23 37.8647143617744 40.0 37.0 41.0 33.0 41.0 24 37.751247761761945 40.0 37.0 41.0 32.0 41.0 25 37.655827009257 40.0 37.0 41.0 32.0 41.0 26 37.28099648703313 39.0 37.0 41.0 31.0 41.0 27 37.060391812077306 39.0 36.0 40.0 31.0 41.0 28 36.899131243436045 39.0 36.0 40.0 30.0 41.0 29 36.85442667767757 39.0 36.0 40.0 30.0 41.0 30 36.76183345652499 39.0 36.0 40.0 30.0 41.0 31 36.5568145307057 39.0 36.0 40.0 30.0 41.0 32 36.43919698153531 39.0 35.0 40.0 30.0 41.0 33 36.25111303633544 39.0 35.0 40.0 29.0 41.0 34 36.10847039022921 39.0 35.0 40.0 29.0 41.0 35 35.943667745678376 38.0 35.0 40.0 27.0 41.0 36 35.791242374941795 38.0 35.0 40.0 27.0 41.0 37 35.544147264942026 38.0 35.0 40.0 26.0 41.0 38 35.42997765414308 38.0 34.0 40.0 26.0 41.0 39 35.26211537483491 38.0 34.0 40.0 25.0 41.0 40 35.122806537692746 38.0 34.0 40.0 24.0 41.0 41 34.98163724841139 38.0 34.0 40.0 24.0 41.0 42 34.77682054803865 38.0 33.0 40.0 24.0 41.0 43 31.27506944703039 35.0 28.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 20.0 11 34.0 12 28.0 13 35.0 14 66.0 15 119.0 16 246.0 17 514.0 18 1116.0 19 2216.0 20 4567.0 21 8826.0 22 15224.0 23 25090.0 24 37808.0 25 53653.0 26 72954.0 27 95590.0 28 123922.0 29 156467.0 30 196051.0 31 243441.0 32 303452.0 33 378091.0 34 483876.0 35 635577.0 36 888259.0 37 1378432.0 38 2421409.0 39 1576611.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.90514374318752 17.871160311613927 12.304764842342692 26.918931102855858 2 19.017133800857476 20.63798009183298 33.68538795375639 26.65949815355315 3 19.02784373080794 21.416235001566942 29.985189539946443 29.570731727678666 4 15.18584584445381 15.112293340917063 32.38226958464475 37.319591229984376 5 15.018386478202656 36.37213041157656 33.6757984472469 14.933684662973883 6 37.72637084631844 34.212733919973864 13.511043475615029 14.549851758092668 7 31.128361970587566 30.077064262106145 19.467807653173143 19.326766114133143 8 29.02285564958691 34.17370583678001 18.194995639685445 18.608442873947638 9 27.27272128115807 13.267219562681158 17.22331390277427 42.23674525338651 10 15.967308240901145 27.19023834372416 33.142696580215016 23.699756835159675 11 38.48137147738046 20.22218216525345 20.140918512152364 21.15552784521372 12 22.372175887586817 24.419420189656933 29.041485435428953 24.166918487327298 13 32.89437998897372 18.678425400834232 22.701800070103356 25.725394540088697 14 23.12987871635942 19.200828322459184 24.71108178970289 32.9582111714785 15 26.642581956503186 27.03652064144022 20.73717051998962 25.583726882066976 16 26.0950354147176 25.05489800247174 22.933826583276407 25.91623999953426 17 25.43525979159465 25.343143409477094 24.316165480390886 24.90543131853737 18 25.441048646039672 24.505791655503625 24.677842560954055 25.375317137502652 19 26.25283936719802 24.684070797140638 24.568249770066043 24.494840065595298 20 26.035993493195793 24.38294052056411 24.29418540876947 25.286880577470633 21 25.650633736762664 24.708961772799874 24.257431126088168 25.382973364349294 22 26.29042847518828 24.26376920771014 23.81402904159528 25.631773275506305 23 25.747264766274725 24.093431891051782 24.00945505569658 26.149848286976912 24 25.75326232704699 24.17611255026939 24.02427320493061 26.046351917753007 25 25.95366433937143 23.72265960843837 24.127956311394673 26.195719740795532 26 25.608859517684074 24.122518962342898 24.475935666164784 25.79268585380825 27 26.051064286931215 24.257431126088168 24.16198642727831 25.529518159702302 28 25.80625176507884 24.48201011874182 24.203222403723494 25.508515712455846 29 25.714827409204233 24.636892182640885 24.259067823075473 25.389212585079406 30 25.680665478798126 24.528441784280922 24.194412799805264 25.596479937115685 31 25.701854663284745 24.042452624487556 24.14530090564266 26.11039180658504 32 25.22357665305572 24.32171267487805 24.259441297555796 26.19526937451043 33 25.484569407540953 24.08607224688069 24.33634408687192 26.093014258706432 34 25.785534915964398 23.844917578026784 24.606915363323115 25.762632142685703 35 25.50781270166935 23.94230654104303 24.72463671642994 25.82524404085767 36 25.313408250117174 23.67762297992871 25.002369915268524 26.00659885468558 37 25.012750308912825 23.29461391581292 25.28819872269531 26.404437052578945 38 24.762335669855588 23.31421034148639 25.76068787847931 26.16276611017871 39 24.5483238080864 23.0413542799791 26.15010093147831 26.26022098045619 40 24.76119327732754 22.974930745199124 26.548686078332317 25.715189899141023 41 24.405261113035237 22.718134086345763 26.83919430130669 26.037410499312312 42 23.891843548025136 22.873883929184405 26.96998726122486 26.2642852615656 43 24.181209378471458 21.976424752965855 26.957618665200012 26.884747203362675 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 304.0 1 437.5 2 571.0 3 1670.0 4 2769.0 5 2769.0 6 3286.5 7 3804.0 8 3743.5 9 3683.0 10 5309.5 11 6936.0 12 6936.0 13 14732.0 14 22528.0 15 40045.0 16 57562.0 17 41289.0 18 25016.0 19 25016.0 20 29953.0 21 34890.0 22 30833.5 23 26777.0 24 34573.5 25 42370.0 26 42370.0 27 53949.5 28 65529.0 29 79152.0 30 92775.0 31 112669.5 32 132564.0 33 132564.0 34 158590.0 35 184616.0 36 220161.5 37 255707.0 38 301207.5 39 346708.0 40 346708.0 41 397223.0 42 447738.0 43 500838.5 44 553939.0 45 611880.5 46 669822.0 47 669822.0 48 728011.5 49 786201.0 50 822904.5 51 859608.0 52 868342.5 53 877077.0 54 877077.0 55 851739.0 56 826401.0 57 771597.0 58 716793.0 59 664224.5 60 611656.0 61 611656.0 62 540293.0 63 468930.0 64 400951.0 65 332972.0 66 280319.0 67 227666.0 68 227666.0 69 188280.5 70 148895.0 71 123601.0 72 98307.0 73 81267.0 74 64227.0 75 64227.0 76 52727.5 77 41228.0 78 34217.0 79 27206.0 80 21911.5 81 16617.0 82 16617.0 83 13305.5 84 9994.0 85 7966.5 86 5939.0 87 4899.0 88 3859.0 89 3859.0 90 2899.5 91 1940.0 92 1437.5 93 935.0 94 679.0 95 423.0 96 423.0 97 283.5 98 144.0 99 109.5 100 75.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9103701.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.45809737421331 #Duplication Level Percentage of deduplicated Percentage of total 1 79.76176966459127 42.63912449469293 2 10.198111281450403 10.903432518336778 3 3.611790464277824 5.79238339003857 4 1.7734382760627725 3.7921854419568266 5 1.065363991395945 2.8476165995512486 6 0.6886035743488247 2.208686215786248 7 0.4861745136946177 1.819297514576337 8 0.350439017525811 1.498704249809476 9 0.26522505804386903 1.2760584281091476 >10 1.6179528592986578 16.190572443136283 >50 0.13012672743678977 4.763508010960242 >100 0.04917189541630843 4.398366024932103 >500 0.0011328108190730329 0.41175373002887833 >1k 5.969442882667366E-4 0.5801619944185065 >5k 4.1168539792773715E-5 0.17528206362750812 >10k+ 6.175280968916057E-5 0.7028668800391396 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39972 0.4390741743385465 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12015 0.13197929062037517 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11887 0.13057326904739072 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9237 0.1014642286691973 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.787634831152736E-5 2 0.0 0.0 0.0 0.0 8.787634831152736E-5 3 0.0 0.0 0.0 0.0 8.787634831152736E-5 4 0.0 0.0 0.0 0.0 8.787634831152736E-5 5 0.0 0.0 0.0 0.0 9.886089185046829E-5 6 0.0 0.0 0.0 0.0 1.3181452246729104E-4 7 1.098454353894092E-5 0.0 0.0 0.0 1.647681530841138E-4 8 2.196908707788184E-5 1.098454353894092E-5 0.0 0.0 1.8673724016199565E-4 9 2.196908707788184E-5 1.098454353894092E-5 0.0 1.098454353894092E-5 2.636290449345821E-4 10 2.196908707788184E-5 1.098454353894092E-5 0.0 2.196908707788184E-5 2.74613588473523E-4 11 3.295363061682276E-5 1.098454353894092E-5 0.0 2.196908707788184E-5 2.74613588473523E-4 12 3.295363061682276E-5 1.098454353894092E-5 0.0 3.295363061682276E-5 2.855981320124639E-4 13 3.295363061682276E-5 1.098454353894092E-5 0.0 3.295363061682276E-5 2.9658267555140484E-4 14 3.295363061682276E-5 1.098454353894092E-5 0.0 7.689180477258644E-5 3.4052084970716853E-4 15 3.295363061682276E-5 3.295363061682276E-5 0.0 1.3181452246729104E-4 3.5150539324610945E-4 16 7.689180477258644E-5 3.295363061682276E-5 0.0 1.9772178370093657E-4 4.283971980186959E-4 17 7.689180477258644E-5 3.295363061682276E-5 0.0 3.185517626292867E-4 4.283971980186959E-4 18 7.689180477258644E-5 3.295363061682276E-5 0.0 3.844590238629322E-4 4.3938174155763683E-4 19 7.689180477258644E-5 3.295363061682276E-5 0.0 6.261189817196325E-4 4.5036628509657775E-4 20 8.787634831152736E-5 3.295363061682276E-5 0.0 9.66639831426801E-4 4.613508286355187E-4 21 1.3181452246729104E-4 3.295363061682276E-5 0.0 0.0016257124437632563 4.613508286355187E-4 22 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.002636290449345821 4.833199157134005E-4 23 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.0033722548664548626 5.49227176947046E-4 24 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.004448740133271073 5.49227176947046E-4 25 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.0050309209408349416 5.60211720485987E-4 26 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.006107406207651152 5.821808075638688E-4 27 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.009600491053034364 5.931653511028097E-4 28 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.03225061983033054 5.931653511028097E-4 29 1.4279906600623196E-4 3.295363061682276E-5 0.0 0.08527301149279837 6.041498946417507E-4 30 1.4279906600623196E-4 4.393817415576368E-5 0.0 0.16313145609681162 6.041498946417507E-4 31 1.4279906600623196E-4 4.393817415576368E-5 0.0 0.4167645664109575 6.041498946417507E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4810 0.0 19.461538 37 TCTTATA 8175 0.0 14.981039 37 GAGTACT 11305 0.0 14.122512 11 AGTACTT 11605 0.0 13.821198 12 GTACTTT 11770 0.0 13.438827 13 GTCTTAG 1275 0.0 13.203921 1 TACTTTT 12165 0.0 13.002465 14 CTCTTAT 12975 0.0 12.960692 37 TATACCG 300 0.0 12.95 5 AACGCAG 23135 0.0 12.914416 5 ACTTTTT 13055 0.0 12.286098 15 TAATACT 1070 0.0 12.102804 4 TCTATAC 695 0.0 11.978417 3 AGAGTAC 25410 0.0 11.772727 10 ACGCAGA 25595 0.0 11.70209 6 GTATAAA 1170 0.0 11.700854 1 TTAGACA 1285 0.0 11.373541 4 CAGAGTA 26590 0.0 11.354646 9 CGCAGAG 26405 0.0 11.322098 7 CTAGACA 1145 0.0 11.310043 4 >>END_MODULE