##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727298.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2719765 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.929001218855305 31.0 30.0 31.0 26.0 34.0 2 30.18265438374271 31.0 30.0 31.0 27.0 34.0 3 30.201581386627154 31.0 30.0 31.0 27.0 34.0 4 33.93994848819659 35.0 33.0 37.0 30.0 37.0 5 32.34601151202401 35.0 32.0 35.0 25.0 37.0 6 32.40547363467064 35.0 32.0 35.0 25.0 37.0 7 32.48046945232401 35.0 32.0 35.0 26.0 37.0 8 32.337335394785946 35.0 32.0 35.0 25.0 37.0 9 33.60033973523448 35.0 32.0 37.0 27.0 39.0 10 33.004453693609555 35.0 32.0 37.0 25.0 39.0 11 33.302588275089946 35.0 32.0 37.0 25.0 39.0 12 33.13367625511763 35.0 32.0 37.0 25.0 39.0 13 33.33295523694143 35.0 32.0 37.0 26.0 39.0 14 33.83563947620475 36.0 32.0 38.0 25.0 40.0 15 33.80123062102792 36.0 32.0 38.0 25.0 40.0 16 33.676662505767965 36.0 32.0 38.0 25.0 40.0 17 33.53793802038044 36.0 31.0 38.0 25.0 40.0 18 33.40646930892927 36.0 31.0 38.0 24.0 40.0 19 33.37248401975906 36.0 31.0 38.0 24.0 40.0 20 33.17197257851322 36.0 31.0 38.0 24.0 40.0 21 33.01656135732315 36.0 31.0 38.0 23.0 40.0 22 32.86845260528023 36.0 30.0 38.0 23.0 40.0 23 32.66487619334759 35.0 30.0 38.0 21.0 40.0 24 32.44396960766831 35.0 30.0 38.0 19.0 40.0 25 32.26550749789044 35.0 30.0 38.0 19.0 40.0 26 31.733197904966055 34.0 29.0 38.0 18.0 40.0 27 31.36004176831454 34.0 27.0 38.0 16.0 40.0 28 31.10540616560622 34.0 27.0 38.0 16.0 39.0 29 30.949178697424227 34.0 27.0 38.0 16.0 39.0 30 30.782285601881046 34.0 27.0 38.0 16.0 39.0 31 30.475133329533985 34.0 26.0 38.0 15.0 39.0 32 30.248289466185497 34.0 26.0 38.0 15.0 39.0 33 30.003419780753116 33.0 25.0 37.0 14.0 39.0 34 29.777751754287596 33.0 25.0 37.0 12.0 39.0 35 29.533053774866577 33.0 25.0 37.0 11.0 39.0 36 29.27692649916445 33.0 24.0 37.0 9.0 39.0 37 28.90351776716003 32.0 24.0 37.0 9.0 39.0 38 28.669138326289218 32.0 24.0 37.0 9.0 39.0 39 28.397305649568988 31.0 23.0 37.0 9.0 39.0 40 28.157692300621562 31.0 23.0 37.0 9.0 39.0 41 27.89987039321412 31.0 22.0 36.0 9.0 39.0 42 27.580121811994786 31.0 21.0 36.0 9.0 38.0 43 24.919508119267658 28.0 15.0 34.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 12.0 10 47.0 11 101.0 12 222.0 13 505.0 14 959.0 15 1744.0 16 3102.0 17 5287.0 18 8938.0 19 14103.0 20 21108.0 21 30463.0 22 42133.0 23 56336.0 24 72684.0 25 91307.0 26 112276.0 27 133747.0 28 157707.0 29 181100.0 30 204606.0 31 225653.0 32 243306.0 33 252312.0 34 247148.0 35 222918.0 36 177555.0 37 122894.0 38 72721.0 39 16769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.653596910027154 21.773976795789345 13.804722099151947 25.767704195031556 2 21.399937126920893 23.39724204113223 30.88744799642616 24.315372835520716 3 21.417144495939908 23.18615762758915 29.04622274350909 26.350475132961854 4 18.349452985827817 16.873369574209537 31.062095438392657 33.71508200156999 5 15.257825584195695 37.51802085841975 32.58020453973046 14.643949017654098 6 36.993269639104845 35.63149757423895 12.924976974113573 14.450255812542629 7 30.89645612764338 30.74868600779847 19.05131509523801 19.303542769320142 8 29.201603815035494 34.62494002239164 17.71064779493817 18.462808367634704 9 27.686289072769156 13.218715587559954 16.775456703060744 42.31953863661015 10 16.071719431642073 28.11158316986945 32.714848525516 23.10184887297248 11 39.142646515415855 20.45720861912702 19.672104023693223 20.728040841763903 12 22.48282480287819 24.982856974775395 28.380246087437698 24.154072134908713 13 33.14183394521218 19.12838057699838 22.349688300275943 25.3800971775135 14 23.351539563160788 19.601252314078607 24.30849724148961 32.738710881271 15 27.02303324000419 27.552343676751484 20.147770119844914 25.27685296339941 16 26.144133776263757 25.597983649322643 22.568273361852953 25.689609212560644 17 25.725568201664483 25.65633427888071 23.703297895222565 24.914799624232238 18 25.72218555647271 24.96561283787386 24.11689980568174 25.195301799971688 19 26.76444472224622 24.858287388800136 24.1339968710532 24.243271017900444 20 26.280285245232584 24.524398247642722 23.931883820844817 25.26343268627988 21 26.031807895167415 24.771294578759562 23.920890223971554 25.276007302101466 22 26.597959750199006 24.458767577345835 23.412721319672837 25.530551352782314 23 26.07725299796122 24.46601085020213 23.643145639421054 25.813590512415598 24 26.033352146233224 24.39122497715795 23.575382431938053 26.00004044467077 25 26.276792296393253 24.069910451822125 23.72304224813541 25.93025500364921 26 25.946579943487762 24.29073835423281 24.00641231871136 25.756269383568064 27 26.45816826086077 24.46498134949159 23.534864225401826 25.541986164245806 28 26.0543098392692 24.874685864403727 23.650094769217194 25.42090952710988 29 26.07960614244245 24.84266103872945 23.757015771583205 25.32071704724489 30 26.242046647412554 24.727982013151873 23.494750465573315 25.535220873862265 31 26.15582596290488 24.28776015574875 23.79665154893897 25.759762332407394 32 25.714831979968857 24.545355940678697 23.727233786742605 26.012578292609838 33 26.06681091932575 24.300592146747974 23.522583752640394 26.110013181285886 34 26.10725559009694 24.23904271141073 24.04380525523345 25.609896443258883 35 26.088393666364556 24.235733601983995 23.93659010980728 25.73928262184417 36 25.851976181765707 24.031561550354535 24.12638591937171 25.99007634850805 37 25.567135395888986 23.926956924587234 24.454355431443524 26.051552248080256 38 25.580739512421108 23.75988366641971 24.609368824144735 26.050007997014447 39 25.191551475954725 23.826654141074687 24.972231056727328 26.009563326243264 40 25.53275742573347 23.513832996600808 25.297994495847988 25.65541508181773 41 25.207435201203044 23.37735061668931 25.31325316709348 26.10196101501416 42 24.861375890931754 23.495963805696448 25.35759523341171 26.28506506996009 43 25.623610863438568 22.55202195777944 24.87001634332378 26.954350835458214 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 96.0 1 102.5 2 109.0 3 178.5 4 248.0 5 248.0 6 361.5 7 475.0 8 574.0 9 673.0 10 1029.0 11 1385.0 12 1385.0 13 3060.0 14 4735.0 15 9373.0 16 14011.0 17 10532.0 18 7053.0 19 7053.0 20 8230.5 21 9408.0 22 8668.5 23 7929.0 24 9886.5 25 11844.0 26 11844.0 27 15301.5 28 18759.0 29 22939.5 30 27120.0 31 33696.5 32 40273.0 33 40273.0 34 48360.5 35 56448.0 36 67568.0 37 78688.0 38 92277.5 39 105867.0 40 105867.0 41 121123.5 42 136380.0 43 152723.5 44 169067.0 45 187068.5 46 205070.0 47 205070.0 48 222477.0 49 239884.0 50 249573.0 51 259262.0 52 259234.5 53 259207.0 54 259207.0 55 249930.5 56 240654.0 57 225322.0 58 209990.0 59 193885.5 60 177781.0 61 177781.0 62 157616.0 63 137451.0 64 118276.5 65 99102.0 66 83924.0 67 68746.0 68 68746.0 69 57660.5 70 46575.0 71 39040.0 72 31505.0 73 26097.5 74 20690.0 75 20690.0 76 17155.5 77 13621.0 78 11086.0 79 8551.0 80 6848.5 81 5146.0 82 5146.0 83 4026.0 84 2906.0 85 2219.0 86 1532.0 87 1178.5 88 825.0 89 825.0 90 626.5 91 428.0 92 301.0 93 174.0 94 120.5 95 67.0 96 67.0 97 45.0 98 23.0 99 15.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2719765.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.25915143913798 #Duplication Level Percentage of deduplicated Percentage of total 1 88.266390697891 63.78054492425025 2 6.4274873472046465 9.288895631896075 3 1.9991298964921436 4.333662898114021 4 0.9835237227720492 2.8427435851108105 5 0.5518382805642796 1.9937682942603896 6 0.3515268050980217 1.5240617186696572 7 0.27021897162227565 1.36680555145275 8 0.19657758828652167 1.1363623777229028 9 0.14219722987562217 0.9247546051027647 >10 0.7745412125373633 9.635767094918208 >50 0.02714447521357304 1.3213465711499772 >100 0.008863495667990325 1.071359230093691 >500 3.056055133718753E-4 0.15730311022494495 >1k 2.037370089133407E-4 0.2964247191729333 >5k 5.093425222833517E-5 0.32619968786065406 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8863 0.3258737427682171 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2766 0.10169996304827808 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.676788251926177E-5 2 0.0 0.0 0.0 0.0 3.676788251926177E-5 3 0.0 0.0 0.0 0.0 3.676788251926177E-5 4 0.0 0.0 0.0 0.0 3.676788251926177E-5 5 0.0 0.0 0.0 0.0 3.676788251926177E-5 6 0.0 0.0 0.0 0.0 3.676788251926177E-5 7 3.676788251926177E-5 0.0 0.0 0.0 3.676788251926177E-5 8 3.676788251926177E-5 0.0 0.0 0.0 3.676788251926177E-5 9 3.676788251926177E-5 0.0 0.0 0.0 3.676788251926177E-5 10 3.676788251926177E-5 3.676788251926177E-5 0.0 0.0 3.676788251926177E-5 11 3.676788251926177E-5 3.676788251926177E-5 0.0 0.0 3.676788251926177E-5 12 3.676788251926177E-5 3.676788251926177E-5 0.0 0.0 3.676788251926177E-5 13 3.676788251926177E-5 3.676788251926177E-5 0.0 0.0 3.676788251926177E-5 14 3.676788251926177E-5 3.676788251926177E-5 0.0 0.0 3.676788251926177E-5 15 3.676788251926177E-5 3.676788251926177E-5 0.0 3.676788251926177E-5 3.676788251926177E-5 16 3.676788251926177E-5 3.676788251926177E-5 0.0 3.676788251926177E-5 3.676788251926177E-5 17 3.676788251926177E-5 3.676788251926177E-5 0.0 3.676788251926177E-5 3.676788251926177E-5 18 3.676788251926177E-5 3.676788251926177E-5 0.0 3.676788251926177E-5 3.676788251926177E-5 19 3.676788251926177E-5 3.676788251926177E-5 0.0 1.1030364755778532E-4 7.353576503852355E-5 20 3.676788251926177E-5 3.676788251926177E-5 0.0 2.2060729511557065E-4 7.353576503852355E-5 21 1.470715300770471E-4 3.676788251926177E-5 0.0 4.7798247275040307E-4 1.1030364755778532E-4 22 1.8383941259630888E-4 3.676788251926177E-5 0.0 9.191970629815443E-4 1.1030364755778532E-4 23 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.0011030364755778533 2.2060729511557065E-4 24 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.0015442510658089945 2.2060729511557065E-4 25 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.0018383941259630886 2.2060729511557065E-4 26 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.0022060729511557066 2.2060729511557065E-4 27 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.004301842254753627 2.2060729511557065E-4 28 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.015883725248321087 2.2060729511557065E-4 29 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.04470974514342232 2.2060729511557065E-4 30 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.08761786404340081 2.2060729511557065E-4 31 1.8383941259630888E-4 3.676788251926177E-5 0.0 0.23410110800013972 2.2060729511557065E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACT 230 0.0 16.891304 4 TATACTG 310 0.0 16.709679 5 CGTATAC 80 3.3846905E-4 16.1875 3 ATTATAC 190 2.7284841E-11 15.578948 3 TTATACT 310 0.0 15.5161295 4 TCTTATA 1410 0.0 15.482269 37 CTTATAC 820 0.0 15.341464 37 TAAGGGT 320 0.0 15.031251 4 TATTAGT 150 8.113602E-8 14.8 2 TAGTACG 115 2.2119291E-5 14.478261 2 CGCCTAA 90 8.279138E-4 14.388889 22 GTAAGAC 260 0.0 14.230769 3 GAGTACT 2800 0.0 14.073215 11 ACCGTGC 305 0.0 13.95082 8 AGTACTT 2835 0.0 13.768959 12 GTACTTT 2805 0.0 13.71836 13 TATACCG 95 0.0012458389 13.631579 5 TTTATAC 205 1.4260877E-9 13.536586 3 TAAGACT 400 0.0 13.4125 4 AACGTTA 85 0.009409048 13.058824 12 >>END_MODULE