##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727296.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5837090 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16520423704277 33.0 31.0 34.0 30.0 34.0 2 32.3144784473085 34.0 31.0 34.0 30.0 34.0 3 32.3930989585564 34.0 31.0 34.0 30.0 34.0 4 35.97013888769918 37.0 35.0 37.0 35.0 37.0 5 35.845108264563336 37.0 35.0 37.0 35.0 37.0 6 35.852130256686124 37.0 35.0 37.0 35.0 37.0 7 35.79951653991972 37.0 35.0 37.0 35.0 37.0 8 35.76212342108825 37.0 35.0 37.0 35.0 37.0 9 37.499346934859666 39.0 37.0 39.0 35.0 39.0 10 37.33042098031725 39.0 37.0 39.0 34.0 39.0 11 37.43323299794932 39.0 37.0 39.0 35.0 39.0 12 37.33772444831243 39.0 37.0 39.0 34.0 39.0 13 37.393193183589766 39.0 37.0 39.0 34.0 39.0 14 38.58267561404741 40.0 38.0 41.0 34.0 41.0 15 38.538297165197044 40.0 38.0 41.0 34.0 41.0 16 38.46969740058831 40.0 38.0 41.0 34.0 41.0 17 38.41790875247769 40.0 38.0 41.0 34.0 41.0 18 38.35741610973961 40.0 38.0 41.0 34.0 41.0 19 38.353780393997695 40.0 38.0 41.0 34.0 41.0 20 38.23294329880129 40.0 38.0 41.0 34.0 41.0 21 38.14945580760276 40.0 38.0 41.0 33.0 41.0 22 38.072691529512134 40.0 38.0 41.0 33.0 41.0 23 37.95445692973725 40.0 37.0 41.0 33.0 41.0 24 37.84279306983446 40.0 37.0 41.0 33.0 41.0 25 37.753074048883946 40.0 37.0 41.0 32.0 41.0 26 37.387914011947736 39.0 37.0 41.0 32.0 41.0 27 37.17527997683777 39.0 37.0 41.0 31.0 41.0 28 37.01316923329947 39.0 36.0 40.0 31.0 41.0 29 36.97947727377854 39.0 36.0 40.0 30.0 41.0 30 36.90479125728745 39.0 36.0 40.0 30.0 41.0 31 36.70482021007043 39.0 36.0 40.0 30.0 41.0 32 36.59446916185976 39.0 36.0 40.0 30.0 41.0 33 36.41524201271524 39.0 36.0 40.0 30.0 41.0 34 36.28081852429892 39.0 35.0 40.0 29.0 41.0 35 36.12874206154094 39.0 35.0 40.0 28.0 41.0 36 35.981256071090215 39.0 35.0 40.0 27.0 41.0 37 35.74491347572164 38.0 35.0 40.0 27.0 41.0 38 35.63912411835349 38.0 35.0 40.0 26.0 41.0 39 35.47292674945906 38.0 34.0 40.0 26.0 41.0 40 35.34579028248665 38.0 34.0 40.0 25.0 41.0 41 35.2165836058721 38.0 34.0 40.0 25.0 41.0 42 35.032074372675424 38.0 34.0 40.0 24.0 41.0 43 31.517001793701997 35.0 28.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 4.0 12 14.0 13 16.0 14 26.0 15 67.0 16 155.0 17 300.0 18 641.0 19 1293.0 20 2691.0 21 5288.0 22 9389.0 23 15162.0 24 22854.0 25 32491.0 26 43805.0 27 58132.0 28 74272.0 29 94930.0 30 119076.0 31 149279.0 32 185890.0 33 232242.0 34 298131.0 35 392992.0 36 550152.0 37 857004.0 38 1577634.0 39 1113153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.78604578651349 18.07121356703426 12.064350558240493 27.078390088211762 2 19.353976039430606 20.3350299549947 33.71549864744247 26.595495358132222 3 18.980056843392855 21.251668211386153 29.96789496135917 29.80037998386182 4 15.36279207618865 15.237609836408211 32.52978795941128 36.86981012799186 5 15.019864350215602 36.195689975655675 33.844261438490754 14.940184235637963 6 37.71279867194098 33.96070644790469 13.77057746239993 14.555917417754394 7 31.25271325266528 30.085470671173482 19.447224558812696 19.21459151734854 8 28.648453253247762 34.186486759669634 18.28971285349378 18.875347133588825 9 27.41429376624311 13.19649003184806 17.355377422654097 42.03383877925474 10 15.97359300610407 26.974622628741372 33.284718926725475 23.76706543842908 11 38.458529849633976 20.23861204812672 20.379401379797123 20.923456722442175 12 22.351342878043685 24.103174698351403 29.057338502575767 24.488143921029142 13 32.48137342408632 18.963421842048007 22.633778132596895 25.92142660126878 14 23.213776042514336 19.3684866945687 24.179805348212895 33.23793191470407 15 26.57329251390676 27.072685190737168 20.50749602969973 25.846526265656344 16 26.2002984363784 25.353198254609744 22.701911397631356 25.7445919113805 17 25.453916249363985 25.427498976373503 23.873762439845883 25.244822334416632 18 25.498664574299866 24.851338595087622 24.255014056661793 25.39498277395072 19 26.487376415302833 24.70799662160426 24.110284405414344 24.69434255767857 20 26.12068684909775 24.432653942289736 23.975508344055 25.47115086455751 21 25.9689674135571 24.571455982347366 23.975422684933758 25.484153919161773 22 26.49357813568062 24.154381721028802 23.49136299080535 25.860677152485227 23 25.94864906999892 24.232742685139343 23.765163805937547 26.05344443892419 24 25.850209607869672 24.104716562533728 23.771211339897107 26.27386248969949 25 26.146230399051586 23.804961033665748 23.82428573141754 26.224522835865134 26 25.805598337527773 24.11660604856187 24.079018826161665 25.99877678774869 27 26.165863469639838 24.38293738832192 23.714008178732897 25.737190963305345 28 25.948255038041218 24.472468301842184 23.725829137464043 25.853447522652555 29 25.791670164414114 24.68680455500943 23.912805867307167 25.60871941326928 30 26.16154624992933 24.42965587304633 23.633437209294357 25.77536066772998 31 26.01787877178526 23.980219595723213 23.833554048335728 26.168347584155804 32 25.55746099511914 24.360854466866193 23.88697107634112 26.19471346167354 33 25.710431053829907 23.89783265291438 23.946230056415096 26.445506236840615 34 25.95836281434756 23.78549928131997 24.333734789081547 25.92240311525092 35 25.777005322857793 23.79514449837162 24.338703018113478 26.089147160657106 36 25.549751674207528 23.429585632566912 24.749027340678317 26.271635352547246 37 25.320664920362717 23.155305126355767 25.028601580582105 26.495428372699408 38 25.065195157175925 23.089758766782765 25.404045508977934 26.441000567063384 39 24.720554248778072 22.978847336600943 25.941419440166246 26.35917897445474 40 25.078814957453115 22.75985122723823 26.167011301864456 25.994322513444203 41 24.51257390240685 22.703744502825895 26.535859477924788 26.247822116842467 42 24.16724772103908 22.85870185314943 26.533323967936077 26.440726457875414 43 24.344819079370026 21.99587465672107 26.412835847999606 27.246470415909297 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 165.0 1 193.0 2 221.0 3 545.0 4 869.0 5 869.0 6 990.5 7 1112.0 8 1127.0 9 1142.0 10 1751.0 11 2360.0 12 2360.0 13 4663.0 14 6966.0 15 11631.0 16 16296.0 17 12821.5 18 9347.0 19 9347.0 20 12038.5 21 14730.0 22 14957.0 23 15184.0 24 20076.5 25 24969.0 26 24969.0 27 31874.0 28 38779.0 29 47615.5 30 56452.0 31 70158.5 32 83865.0 33 83865.0 34 101528.0 35 119191.0 36 143092.5 37 166994.0 38 196571.0 39 226148.0 40 226148.0 41 259137.0 42 292126.0 43 328367.5 44 364609.0 45 404726.0 46 444843.0 47 444843.0 48 481663.5 49 518484.0 50 540096.0 51 561708.0 52 561785.0 53 561862.0 54 561862.0 55 543431.5 56 525001.0 57 495083.0 58 465165.0 59 431966.5 60 398768.0 61 398768.0 62 350855.0 63 302942.0 64 257857.0 65 212772.0 66 178111.5 67 143451.0 68 143451.0 69 118153.5 70 92856.0 71 77042.5 72 61229.0 73 50296.5 74 39364.0 75 39364.0 76 32250.0 77 25136.0 78 20948.0 79 16760.0 80 13529.5 81 10299.0 82 10299.0 83 8345.5 84 6392.0 85 5110.5 86 3829.0 87 3128.0 88 2427.0 89 2427.0 90 1840.0 91 1253.0 92 923.5 93 594.0 94 434.5 95 275.0 96 275.0 97 187.0 98 99.0 99 77.5 100 56.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5837090.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.03371085747221 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0348052486458 47.02750457191481 2 10.030502837913337 11.642146029010341 3 3.3013623750375634 5.747709285260031 4 1.5977699983237046 3.7089808839784695 5 0.8860434825531419 2.5710195636818383 6 0.6022656002785142 2.0971024623579133 7 0.41346300735527247 1.6796354833381753 8 0.30350537661489985 1.409083461612584 9 0.24310002231165703 1.2697196763851772 >10 1.4561120696137893 15.719567285813474 >50 0.10101136930676824 3.9402619674870647 >100 0.0295864726044555 2.7148986249124527 >500 3.24598312181746E-4 0.12037211649651189 >1k 1.1803290327596941E-4 0.17968967070293673 >5k 0.0 0.0 >10k+ 2.9508225818063358E-5 0.17230891704817486 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10062 0.1723804155837926 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7131824248041405E-5 2 0.0 0.0 0.0 0.0 1.7131824248041405E-5 3 0.0 0.0 0.0 0.0 1.7131824248041405E-5 4 0.0 0.0 0.0 0.0 3.426364849608281E-5 5 0.0 0.0 0.0 0.0 3.426364849608281E-5 6 3.426364849608281E-5 0.0 0.0 0.0 6.852729699216562E-5 7 3.426364849608281E-5 0.0 0.0 0.0 6.852729699216562E-5 8 3.426364849608281E-5 0.0 0.0 0.0 8.565912124020702E-5 9 3.426364849608281E-5 0.0 0.0 0.0 1.7131824248041403E-4 10 5.1395472744124214E-5 0.0 0.0 0.0 1.7131824248041403E-4 11 5.1395472744124214E-5 0.0 0.0 0.0 1.7131824248041403E-4 12 5.1395472744124214E-5 0.0 0.0 0.0 2.2271371522453827E-4 13 5.1395472744124214E-5 0.0 0.0 1.7131824248041405E-5 2.569773637206211E-4 14 5.1395472744124214E-5 0.0 0.0 1.7131824248041405E-5 3.4263648496082806E-4 15 5.1395472744124214E-5 0.0 0.0 5.1395472744124214E-5 3.597683092088695E-4 16 5.1395472744124214E-5 0.0 0.0 8.565912124020702E-5 4.282956062010351E-4 17 5.1395472744124214E-5 0.0 0.0 1.1992276973628983E-4 4.282956062010351E-4 18 5.1395472744124214E-5 0.0 0.0 1.7131824248041403E-4 4.796910789451593E-4 19 6.852729699216562E-5 0.0 0.0 2.3984553947257965E-4 4.968229031932007E-4 20 6.852729699216562E-5 0.0 0.0 4.282956062010351E-4 5.139547274412422E-4 21 8.565912124020702E-5 0.0 0.0 6.338774971775319E-4 5.48218375937325E-4 22 8.565912124020702E-5 0.0 0.0 0.0012163595216109397 5.48218375937325E-4 23 8.565912124020702E-5 0.0 0.0 0.0014733368853315607 7.538002669138218E-4 24 1.0279094548824843E-4 0.0 0.0 0.0019701597885247615 7.538002669138218E-4 25 1.0279094548824843E-4 0.0 0.0 0.0022271371522453827 7.538002669138218E-4 26 1.0279094548824843E-4 0.0 0.0 0.002621169109950335 7.880639154099045E-4 27 1.0279094548824843E-4 0.0 0.0 0.0062359840262870714 8.05195739657946E-4 28 1.0279094548824843E-4 0.0 0.0 0.026502932111720053 8.05195739657946E-4 29 1.0279094548824843E-4 0.0 0.0 0.07178234359929349 8.05195739657946E-4 30 1.1992276973628983E-4 0.0 0.0 0.13758568053602052 8.05195739657946E-4 31 1.1992276973628983E-4 0.0 0.0 0.39147931589199414 8.223275639059874E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3025 0.0 19.57025 37 TCTTATA 5125 0.0 14.836098 37 TATACCG 250 0.0 14.799999 5 GTCTTAG 725 0.0 14.289656 1 AACGCAG 7255 0.0 14.177808 5 CTCTTAT 8415 0.0 13.938206 37 GGTATCA 4775 0.0 13.482722 1 GTATTAG 525 0.0 13.0380945 1 TCGTTAC 545 0.0 12.899082 23 TATACAG 775 0.0 12.651612 5 ACGCAGA 8105 0.0 12.622456 6 AGAGTAC 8335 0.0 12.274145 10 GTTACGG 940 0.0 12.202128 25 CAACGCA 8595 0.0 12.053519 4 CGCAGAG 8560 0.0 12.016355 7 GTACTAG 355 0.0 11.985916 1 TAATACC 510 0.0 11.970588 4 CTCGTTA 560 0.0 11.892858 22 CAGAGTA 8815 0.0 11.878616 9 TACGGAT 1165 0.0 11.751073 27 >>END_MODULE