##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727295.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4900997 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.133247173993375 33.0 31.0 34.0 30.0 34.0 2 32.28839050503397 34.0 31.0 34.0 30.0 34.0 3 32.36980700049398 34.0 31.0 34.0 30.0 34.0 4 35.95398548499418 37.0 35.0 37.0 35.0 37.0 5 35.82455059654189 37.0 35.0 37.0 35.0 37.0 6 35.832794429378346 37.0 35.0 37.0 35.0 37.0 7 35.78111902537382 37.0 35.0 37.0 35.0 37.0 8 35.74344546630002 37.0 35.0 37.0 35.0 37.0 9 37.47763648906539 39.0 37.0 39.0 35.0 39.0 10 37.311359300974885 39.0 37.0 39.0 34.0 39.0 11 37.40980600477821 39.0 37.0 39.0 35.0 39.0 12 37.31127564452702 39.0 37.0 39.0 34.0 39.0 13 37.362235887922395 39.0 37.0 39.0 34.0 39.0 14 38.55299584961998 40.0 38.0 41.0 34.0 41.0 15 38.506255359878814 40.0 38.0 41.0 34.0 41.0 16 38.436743176949506 40.0 38.0 41.0 34.0 41.0 17 38.37799635461928 40.0 38.0 41.0 34.0 41.0 18 38.31660149965405 40.0 38.0 41.0 34.0 41.0 19 38.309451525883404 40.0 38.0 41.0 34.0 41.0 20 38.183116210844446 40.0 38.0 41.0 34.0 41.0 21 38.09891864859334 40.0 38.0 41.0 33.0 41.0 22 38.016638247279076 40.0 37.0 41.0 33.0 41.0 23 37.89764449968037 40.0 37.0 41.0 33.0 41.0 24 37.781021494198015 40.0 37.0 41.0 32.0 41.0 25 37.68806550993604 40.0 37.0 41.0 32.0 41.0 26 37.31437787046187 39.0 37.0 41.0 31.0 41.0 27 37.09886376180194 39.0 36.0 41.0 31.0 41.0 28 36.93820032944317 39.0 36.0 40.0 30.0 41.0 29 36.90076100842339 39.0 36.0 40.0 30.0 41.0 30 36.825936641054874 39.0 36.0 40.0 30.0 41.0 31 36.61712912699192 39.0 36.0 40.0 30.0 41.0 32 36.50664732094307 39.0 36.0 40.0 30.0 41.0 33 36.32696857394526 39.0 35.0 40.0 29.0 41.0 34 36.18852633453969 39.0 35.0 40.0 29.0 41.0 35 36.03484270649421 39.0 35.0 40.0 28.0 41.0 36 35.88530986654348 38.0 35.0 40.0 27.0 41.0 37 35.63992612115453 38.0 35.0 40.0 26.0 41.0 38 35.52892380876789 38.0 35.0 40.0 26.0 41.0 39 35.362210178867684 38.0 34.0 40.0 25.0 41.0 40 35.23502503674253 38.0 34.0 40.0 25.0 41.0 41 35.100745011678235 38.0 34.0 40.0 24.0 41.0 42 34.91476122103319 38.0 34.0 40.0 24.0 41.0 43 31.382923311318084 35.0 28.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 6.0 11 16.0 12 13.0 13 26.0 14 37.0 15 67.0 16 135.0 17 262.0 18 603.0 19 1188.0 20 2586.0 21 4801.0 22 8587.0 23 13588.0 24 20614.0 25 28808.0 26 38756.0 27 50574.0 28 64562.0 29 81481.0 30 102826.0 31 127876.0 32 158773.0 33 198271.0 34 253666.0 35 334123.0 36 465372.0 37 720626.0 38 1318220.0 39 904533.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.792435906408436 18.049184686299544 11.932082390582979 27.22629701670905 2 19.714886583280915 20.249206436975985 33.31175269031995 26.72415428942315 3 19.189687322803913 21.095544437182884 29.687775772970276 30.02699246704293 4 15.585339064684186 15.221943616778383 32.19865264149315 36.99406467704428 5 15.222596545151934 36.00408243465564 33.62285265630646 15.15046836388596 6 37.947891010747405 33.770700124892954 13.601293777572195 14.680115086787444 7 31.376840263317852 29.902099511589174 19.28019951858775 19.440860706505227 8 28.729440152687303 33.906896902813855 18.1895030745785 19.174159869920345 9 27.434234299674127 13.167239237240913 17.2287189728947 42.16980749019026 10 16.213721412194293 26.778204516346367 33.103958235436586 23.90411583602275 11 38.659011625593735 20.097380186113153 20.19001439911104 21.05359378918208 12 22.486587933026687 23.96138989679039 28.813525084793973 24.738497085388953 13 32.614323167306566 18.910988927354985 22.43368033075719 26.041007574581254 14 23.39936139524264 19.28073002289126 23.83874138262072 33.48116719924538 15 26.719706214878318 26.91025927989754 20.349696194468187 26.020338310755953 16 26.446659730662965 25.198301488452245 22.43488416744593 25.920154613438857 17 25.678509903189084 25.300586798971718 23.595627583530455 25.425275714308743 18 25.75149505294535 24.71433873556748 23.96957190547148 25.564594306015692 19 26.664737807429795 24.55510582846715 23.871653053450146 24.908503310652915 20 26.37834709957994 24.255044432796023 23.72033690287915 25.64627156474489 21 26.16075871909328 24.36973538241301 23.66863313729839 25.800872761195325 22 26.784652184035206 23.962165249233983 23.225519215784054 26.027663350946757 23 26.210728143681784 24.05441178601007 23.454554246819576 26.28030582348857 24 26.157392057167144 24.0340281783482 23.37279537204369 26.435784392440965 25 26.38852870140504 23.69903511469197 23.490424499341664 26.422011684561326 26 26.073225509013774 23.989404604818162 23.715541960135866 26.221827926032194 27 26.418624618623515 24.152004173844627 23.458859493282695 25.970511714249163 28 26.25008748220005 24.29672982864507 23.440312246671443 26.01287044248344 29 26.112421615438652 24.443169420426088 23.589587996075085 25.85482096806017 30 26.31474779519351 24.23725213461669 23.408216736308958 26.03978333388084 31 26.27198098672576 23.781691765981495 23.531783431003937 26.41454381628881 32 25.853882383523192 24.175407575234182 23.59691303626589 26.37379700497674 33 26.007402167354925 23.73831283716354 23.632375208554503 26.621909786927027 34 26.247618596787554 23.631967128321033 23.964776962728195 26.155637312163222 35 26.03774293271349 23.681548876687746 23.959288283588013 26.321419907010757 36 25.8425377530327 23.334599062190815 24.33641563135011 26.486447553426373 37 25.639170968682496 23.10346241795292 24.632885920966693 26.624480692397896 38 25.318073036975946 23.135578332327075 25.013563566759988 26.53278506393699 39 25.174469602817553 22.957961410708883 25.404810490600177 26.46275849587339 40 25.414624820215153 22.701095307750645 25.6117887850166 26.272491087017602 41 24.8967914079523 22.716235084412418 25.965390307319105 26.421583200316178 42 24.598586777343467 22.751921700829445 25.99165027034295 26.657841251484136 43 24.79617922639006 21.92876265788369 25.872756094321215 27.402302021405035 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 166.0 1 170.0 2 174.0 3 366.0 4 558.0 5 558.0 6 628.0 7 698.0 8 742.0 9 786.0 10 1078.5 11 1371.0 12 1371.0 13 2887.0 14 4403.0 15 7021.0 16 9639.0 17 7883.5 18 6128.0 19 6128.0 20 8145.0 21 10162.0 22 10684.5 23 11207.0 24 14935.0 25 18663.0 26 18663.0 27 24257.5 28 29852.0 29 37259.5 30 44667.0 31 55897.5 32 67128.0 33 67128.0 34 81584.0 35 96040.0 36 115600.0 37 135160.0 38 159449.5 39 183739.0 40 183739.0 41 212164.5 42 240590.0 43 271588.0 44 302586.0 45 334529.5 46 366473.0 47 366473.0 48 397723.5 49 428974.0 50 448243.5 51 467513.0 52 469116.5 53 470720.0 54 470720.0 55 455874.5 56 441029.0 57 418451.5 58 395874.0 59 367261.5 60 338649.0 61 338649.0 62 300375.0 63 262101.0 64 224485.5 65 186870.0 66 157667.0 67 128464.0 68 128464.0 69 106688.5 70 84913.0 71 71604.5 72 58296.0 73 48519.0 74 38742.0 75 38742.0 76 32202.5 77 25663.0 78 21427.5 79 17192.0 80 13950.0 81 10708.0 82 10708.0 83 8618.5 84 6529.0 85 5184.0 86 3839.0 87 3142.0 88 2445.0 89 2445.0 90 1851.0 91 1257.0 92 923.0 93 589.0 94 432.0 95 275.0 96 275.0 97 194.5 98 114.0 99 82.5 100 51.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4900997.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.19658357840384 #Duplication Level Percentage of deduplicated Percentage of total 1 80.96278954858943 47.92720538253795 2 9.943608693698804 11.772553262149685 3 3.3859874985155423 6.0131667585391755 4 1.6305733184252633 3.8609747889950565 5 0.9336795157964197 2.763531874614319 6 0.6097413568645892 2.1656763115706408 7 0.4413207930708143 1.8287278248332748 8 0.312538398050141 1.4800964321308496 9 0.2441517597149738 1.3007655044803637 >10 1.4336782579023417 15.503017767317035 >50 0.08154204864029853 3.2314264103868626 >100 0.020043936728484202 1.8429324701448708 >500 2.069246837219302E-4 0.07394451655869354 >1k 1.0346198948683783E-4 0.12030748680711247 >5k 3.448732982894593E-5 0.11567320893417596 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5666 0.11560913014229553 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0808023347086315E-5 2 0.0 0.0 0.0 0.0 4.0808023347086315E-5 3 0.0 0.0 0.0 2.0404011673543157E-5 4.0808023347086315E-5 4 0.0 0.0 0.0 2.0404011673543157E-5 8.161604669417263E-5 5 0.0 0.0 0.0 2.0404011673543157E-5 8.161604669417263E-5 6 4.0808023347086315E-5 0.0 0.0 2.0404011673543157E-5 1.0202005836771579E-4 7 4.0808023347086315E-5 0.0 0.0 4.0808023347086315E-5 1.0202005836771579E-4 8 4.0808023347086315E-5 0.0 0.0 4.0808023347086315E-5 1.2242407004125894E-4 9 4.0808023347086315E-5 0.0 0.0 4.0808023347086315E-5 1.8363610506188843E-4 10 4.0808023347086315E-5 0.0 0.0 4.0808023347086315E-5 1.8363610506188843E-4 11 4.0808023347086315E-5 0.0 0.0 4.0808023347086315E-5 1.8363610506188843E-4 12 4.0808023347086315E-5 2.0404011673543157E-5 0.0 4.0808023347086315E-5 1.8363610506188843E-4 13 4.0808023347086315E-5 2.0404011673543157E-5 0.0 4.0808023347086315E-5 1.8363610506188843E-4 14 6.121203502062947E-5 2.0404011673543157E-5 0.0 4.0808023347086315E-5 2.6525215175606106E-4 15 6.121203502062947E-5 4.0808023347086315E-5 0.0 4.0808023347086315E-5 2.6525215175606106E-4 16 6.121203502062947E-5 4.0808023347086315E-5 0.0 6.121203502062947E-5 3.264641867766905E-4 17 6.121203502062947E-5 4.0808023347086315E-5 0.0 1.0202005836771579E-4 3.264641867766905E-4 18 6.121203502062947E-5 4.0808023347086315E-5 0.0 1.0202005836771579E-4 3.6727221012377686E-4 19 6.121203502062947E-5 4.0808023347086315E-5 0.0 1.0202005836771579E-4 3.6727221012377686E-4 20 8.161604669417263E-5 4.0808023347086315E-5 0.0 1.4282808171480212E-4 3.6727221012377686E-4 21 1.0202005836771579E-4 4.0808023347086315E-5 0.0 2.6525215175606106E-4 3.6727221012377686E-4 22 1.0202005836771579E-4 4.0808023347086315E-5 0.0 6.121203502062948E-4 3.6727221012377686E-4 23 1.2242407004125894E-4 4.0808023347086315E-5 0.0 7.957564552681832E-4 4.488882568179495E-4 24 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.0012242407004125896 4.488882568179495E-4 25 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.0013874727938009348 4.6929226849149266E-4 26 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.0018771690739659706 4.6929226849149266E-4 27 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.004733730708262013 4.6929226849149266E-4 28 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.022628048945959364 4.6929226849149266E-4 29 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.05627426419563203 4.6929226849149266E-4 30 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.10785560570634914 4.6929226849149266E-4 31 1.2242407004125894E-4 4.0808023347086315E-5 0.0 0.30589694300975906 4.896962801650358E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1960 0.0 17.650509 37 TCTTATA 3515 0.0 17.210526 37 CTCTTAT 5640 0.0 14.1046095 37 AACGCAG 5300 0.0 13.75283 5 TAGGACT 730 0.0 13.684932 4 GGTATCA 3165 0.0 13.677725 1 TATACTG 615 0.0 13.235772 5 TAATACC 465 0.0 12.731182 4 CAACGCA 5760 0.0 12.622396 4 GGGTAAG 1315 0.0 12.520912 1 TCAACGC 5870 0.0 12.448893 3 ACGCAGA 5880 0.0 12.396258 6 ACTATAC 345 0.0 12.333333 3 ATCAACG 5965 0.0 12.1886015 2 ATACCGT 335 0.0 12.149253 6 AGAGTAC 6015 0.0 12.087282 10 TAATACT 475 0.0 12.073684 4 TATCAAC 6085 0.0 11.826623 1 TAAGAGT 675 0.0 11.785186 4 GTCTTAG 775 0.0 11.6967745 1 >>END_MODULE