##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727294.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6600644 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.118587368141654 33.0 31.0 34.0 30.0 34.0 2 32.26607161361831 33.0 31.0 34.0 30.0 34.0 3 32.34756957048433 34.0 31.0 34.0 30.0 34.0 4 35.93622834377979 37.0 35.0 37.0 35.0 37.0 5 35.80381353698215 37.0 35.0 37.0 35.0 37.0 6 35.81982545945517 37.0 35.0 37.0 35.0 37.0 7 35.761264052416706 37.0 35.0 37.0 35.0 37.0 8 35.717205775678856 37.0 35.0 37.0 33.0 37.0 9 37.45760716681584 39.0 37.0 39.0 35.0 39.0 10 37.28734984040951 39.0 37.0 39.0 34.0 39.0 11 37.39578244183446 39.0 37.0 39.0 34.0 39.0 12 37.292917175960405 39.0 37.0 39.0 34.0 39.0 13 37.34947196061475 39.0 37.0 39.0 34.0 39.0 14 38.50595502499453 40.0 38.0 41.0 34.0 41.0 15 38.462349582858884 40.0 38.0 41.0 34.0 41.0 16 38.38065270600869 40.0 38.0 41.0 34.0 41.0 17 38.30196099047305 40.0 38.0 41.0 34.0 41.0 18 38.25823162103577 40.0 38.0 41.0 33.0 41.0 19 38.24504078692927 40.0 38.0 41.0 34.0 41.0 20 38.12510355050204 40.0 38.0 41.0 33.0 41.0 21 38.030249624127585 40.0 37.0 41.0 33.0 41.0 22 37.95256205303604 40.0 37.0 41.0 33.0 41.0 23 37.821372278220124 40.0 37.0 41.0 33.0 41.0 24 37.6937436710721 40.0 37.0 41.0 32.0 41.0 25 37.605694838261236 40.0 37.0 41.0 32.0 41.0 26 37.206505001633175 39.0 37.0 41.0 31.0 41.0 27 36.984595594005675 39.0 36.0 40.0 30.0 41.0 28 36.79777215677743 39.0 36.0 40.0 30.0 41.0 29 36.75657875201268 39.0 36.0 40.0 30.0 41.0 30 36.64779466973223 39.0 36.0 40.0 30.0 41.0 31 36.45687784404067 39.0 36.0 40.0 30.0 41.0 32 36.32358797111312 39.0 35.0 40.0 29.0 41.0 33 36.13174275116186 39.0 35.0 40.0 28.0 41.0 34 35.97247829151216 39.0 35.0 40.0 27.0 41.0 35 35.80260077653029 38.0 35.0 40.0 27.0 41.0 36 35.629864146589334 38.0 35.0 40.0 26.0 41.0 37 35.39020798576624 38.0 34.0 40.0 25.0 41.0 38 35.27426323855672 38.0 34.0 40.0 25.0 41.0 39 35.10892028111196 38.0 34.0 40.0 24.0 41.0 40 34.96709411990709 38.0 34.0 40.0 24.0 41.0 41 34.81317201776069 38.0 33.0 40.0 24.0 41.0 42 34.595151927599794 38.0 33.0 40.0 23.0 41.0 43 31.01500899003188 35.0 27.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 15.0 11 18.0 12 21.0 13 27.0 14 50.0 15 117.0 16 211.0 17 421.0 18 935.0 19 1886.0 20 3737.0 21 7206.0 22 12789.0 23 20501.0 24 30307.0 25 42330.0 26 56692.0 27 73604.0 28 93365.0 29 116943.0 30 144396.0 31 180546.0 32 221566.0 33 275472.0 34 351540.0 35 459112.0 36 636672.0 37 980624.0 38 1741604.0 39 1147934.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38393344649401 17.58129964288333 12.048278925510905 26.986487985111758 2 19.452298896895513 20.270885689335767 33.339413548132576 26.93740186563614 3 19.457252958953703 21.1556175427731 29.21470995860404 30.17241953966916 4 15.67718240826198 14.76772569464434 31.597735008887014 37.95735688820667 5 15.603007827721052 35.83376106937444 33.22139476087485 15.341836342029659 6 38.718828041627454 33.34247385558137 13.024592751858757 14.914105350932424 7 31.826712666218633 29.583946657326166 18.9940254314579 19.595315244997305 8 29.25981161838148 34.05881304915096 17.892678350779107 18.788696981688453 9 27.524677895065995 13.362393124064864 16.593017287404077 42.51991169346506 10 16.502753367701697 26.669549213682785 32.62148360069108 24.206213817924432 11 38.83699832925394 19.84676040701483 19.402712826203018 21.913528437528218 12 22.848285712727424 24.069727135715848 28.283058440964243 24.798928710592484 13 33.94343036830952 18.07134273564822 21.79443399765235 26.190792898389915 14 23.463983211335137 18.887202521450938 23.953268802256265 33.69554546495766 15 28.01890239800844 26.150478650265036 19.885605101562817 25.94501385016371 16 26.97214090019095 24.453841170649408 22.306868844918768 26.26714908424087 17 26.347186729052495 24.833713195257918 23.633315173489134 25.185784902200453 18 26.469462676672155 24.16093035770449 23.46589211598141 25.903714849641947 19 26.894587861426857 24.62993004924974 23.580305194462845 24.895176894860562 20 26.781765536817314 23.856293416218175 23.048281349516806 26.313659697447704 21 26.10608904222073 24.75679645804258 22.937534579959166 26.199579919777527 22 27.1896196795343 24.125827722264674 22.209696508401304 26.47485608979972 23 26.39684854992937 23.591773772377362 22.508470385616917 27.50290729207635 24 26.648536112536895 24.012505446438258 22.700815253784327 26.638143187240516 25 26.80349068969634 23.004376542652505 22.52449912463087 27.667633643020288 26 26.302857721155693 23.830023252276597 23.377279550298425 26.48983947626928 27 27.536373723533643 23.454756838878147 22.80868351633568 26.200185921252533 28 26.559044844715153 24.370864418683997 22.871995520437096 26.198095216163757 29 26.91314665659896 23.96148012224262 23.025662344462148 26.099710876696275 30 26.277693509906 24.039563412297348 23.25147364408685 26.431269433709804 31 26.666034405127743 23.623891850552763 22.785049458810384 26.925024285509107 32 26.029520755853518 23.563625003863258 22.937761830512297 27.469092409770923 33 26.52191210433406 23.63389087489039 22.99239286348423 26.85180415729132 34 27.2076330733789 23.44610616782241 22.917491081173292 26.428769677625397 35 26.48982432623241 23.500100899245588 23.427380722244678 26.582694052277322 36 26.282102170636684 23.50520646167253 23.60315145007063 26.60953991762016 37 25.78266605500918 22.96433499519138 23.89403215807427 27.35896679172517 38 25.72318701023718 22.907083005840036 24.503048490420028 26.866681493502753 39 25.354556312990066 22.48944193930168 24.656578964113198 27.499422783595058 40 25.74492731315308 22.57311559296335 25.23684052646984 26.445116567413724 41 25.823556004535313 21.941025754456685 25.40789959282761 26.827518648180387 42 24.6825915774279 22.187744104969152 25.99214561488243 27.13751870272052 43 25.567732481860862 21.173176435511444 25.69656839544747 27.56252268718022 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 82.0 1 115.0 2 148.0 3 412.5 4 677.0 5 677.0 6 784.5 7 892.0 8 903.5 9 915.0 10 1404.5 11 1894.0 12 1894.0 13 3722.5 14 5551.0 15 9473.5 16 13396.0 17 10331.5 18 7267.0 19 7267.0 20 9630.0 21 11993.0 22 11483.5 23 10974.0 24 14776.5 25 18579.0 26 18579.0 27 24204.5 28 29830.0 29 37392.5 30 44955.0 31 56981.0 32 69007.0 33 69007.0 34 85942.0 35 102877.0 36 126569.0 37 150261.0 38 182753.5 39 215246.0 40 215246.0 41 253353.0 42 291460.0 43 334045.0 44 376630.0 45 423654.0 46 470678.0 47 470678.0 48 524698.0 49 578718.0 50 613328.5 51 647939.0 52 669623.0 53 691307.0 54 691307.0 55 681551.5 56 671796.0 57 605584.0 58 539372.0 59 501735.0 60 464098.0 61 464098.0 62 413471.5 63 362845.0 64 312546.5 65 262248.0 66 223020.0 67 183792.0 68 183792.0 69 154131.5 70 124471.0 71 106211.5 72 87952.0 73 73009.5 74 58067.0 75 58067.0 76 48654.5 77 39242.0 78 32789.0 79 26336.0 80 21215.0 81 16094.0 82 16094.0 83 12924.5 84 9755.0 85 7963.5 86 6172.0 87 4931.0 88 3690.0 89 3690.0 90 2791.0 91 1892.0 92 1424.0 93 956.0 94 678.0 95 400.0 96 400.0 97 270.5 98 141.0 99 95.0 100 49.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6600644.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.81596764613924 #Duplication Level Percentage of deduplicated Percentage of total 1 80.40548722885796 43.270990992802815 2 9.987870549950262 10.750138367399003 3 3.4323106408600763 5.541393552000759 4 1.71628154711017 3.694534088437868 5 0.980268924617207 2.6377060365857656 6 0.664413153904091 2.145362207650313 7 0.4589922219871309 1.7290777397802295 8 0.32064997304512716 1.3804870860105587 9 0.2587900573550496 1.2534333618385682 >10 1.5980056032540422 16.13351320242 >50 0.1281822721196082 4.704281099154778 >100 0.046154357303527335 4.200832625715398 >500 0.0014658989234990413 0.5422193431162081 >1k 9.584351056408179E-4 1.0967691483084503 >5k 1.1275707112748982E-4 0.45418442691430116 >10k+ 5.637853556374491E-5 0.4650767218648495 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 18673 0.28289663857041825 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 11984 0.181558041912274 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 8777 0.13297187365354046 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8179 0.123912151602177 No Hit CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT 6976 0.10568665724132373 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.5450110625569266E-5 2 0.0 0.0 0.0 0.0 4.5450110625569266E-5 3 0.0 0.0 0.0 0.0 4.5450110625569266E-5 4 0.0 0.0 0.0 0.0 4.5450110625569266E-5 5 0.0 0.0 0.0 0.0 4.5450110625569266E-5 6 0.0 0.0 0.0 0.0 9.090022125113853E-5 7 0.0 0.0 0.0 0.0 9.090022125113853E-5 8 0.0 0.0 0.0 0.0 9.090022125113853E-5 9 0.0 0.0 0.0 0.0 1.363503318767078E-4 10 3.030007375037951E-5 0.0 3.030007375037951E-5 0.0 1.363503318767078E-4 11 4.5450110625569266E-5 0.0 3.030007375037951E-5 0.0 1.363503318767078E-4 12 7.575018437594876E-5 0.0 3.030007375037951E-5 0.0 1.666504056270873E-4 13 7.575018437594876E-5 0.0 3.030007375037951E-5 0.0 1.969504793774668E-4 14 9.090022125113853E-5 1.5150036875189755E-5 3.030007375037951E-5 1.5150036875189755E-5 3.0300073750379506E-4 15 9.090022125113853E-5 1.5150036875189755E-5 3.030007375037951E-5 3.030007375037951E-5 3.636008850045541E-4 16 1.0605025812632828E-4 1.5150036875189755E-5 3.030007375037951E-5 9.090022125113853E-5 4.3935106938050285E-4 17 1.0605025812632828E-4 1.5150036875189755E-5 3.030007375037951E-5 1.0605025812632828E-4 4.3935106938050285E-4 18 1.0605025812632828E-4 1.5150036875189755E-5 3.030007375037951E-5 1.0605025812632828E-4 4.696511431308824E-4 19 1.0605025812632828E-4 1.5150036875189755E-5 3.030007375037951E-5 1.969504793774668E-4 4.696511431308824E-4 20 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 3.7875092187974384E-4 5.302512906316414E-4 21 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 8.181019912602467E-4 5.605513643820209E-4 22 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.0013938033925174574 5.908514381324005E-4 23 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.0017574042775220114 6.363015487579697E-4 24 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.0024997560844063093 6.363015487579697E-4 25 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.002908807080036433 6.363015487579697E-4 26 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.003832959329423008 6.363015487579697E-4 27 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.007075067220713615 6.363015487579697E-4 28 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.02542176187656841 6.363015487579697E-4 29 1.2120029500151804E-4 1.5150036875189755E-5 3.030007375037951E-5 0.06855391686023364 6.363015487579697E-4 30 1.363503318767078E-4 1.5150036875189755E-5 3.030007375037951E-5 0.13238102221540807 6.363015487579697E-4 31 1.363503318767078E-4 1.5150036875189755E-5 3.030007375037951E-5 0.35060215336564127 6.363015487579697E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2870 0.0 18.95122 37 TCTTATA 4825 0.0 15.643523 37 GTCTTAG 1045 0.0 14.870813 1 TATACCG 305 0.0 14.557377 5 TAGTACT 495 0.0 14.202021 4 CTCTTAT 7985 0.0 13.692549 37 TAGATCG 285 0.0 13.631578 5 TATACTA 275 0.0 13.454546 5 TTAGAAC 695 0.0 13.043165 3 ATAGTAC 525 0.0 13.038095 3 TTACACT 835 0.0 12.628742 4 TAAGACT 955 0.0 12.397905 4 TTAGTAC 330 0.0 12.333333 3 GTATAAG 560 0.0 12.223214 1 TAAGACA 870 0.0 12.12069 4 TAGGACA 1000 0.0 12.025001 4 TTAATAC 585 0.0 12.017094 3 CTAAGAC 865 0.0 11.976879 3 GTATAAT 510 0.0 11.970588 1 TTAGCGC 295 1.6370905E-11 11.915255 4 >>END_MODULE