##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727293.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3174242 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00925323274029 33.0 31.0 34.0 30.0 34.0 2 32.154529805856015 33.0 31.0 34.0 30.0 34.0 3 32.22877713797499 34.0 31.0 34.0 30.0 34.0 4 35.846835559481605 37.0 35.0 37.0 35.0 37.0 5 35.70571777451121 37.0 35.0 37.0 35.0 37.0 6 35.72216107026497 37.0 35.0 37.0 35.0 37.0 7 35.66267757782803 37.0 35.0 37.0 33.0 37.0 8 35.621580522216014 37.0 35.0 37.0 33.0 37.0 9 37.35006341671492 39.0 37.0 39.0 34.0 39.0 10 37.16710635168963 39.0 37.0 39.0 34.0 39.0 11 37.2807788442091 39.0 37.0 39.0 34.0 39.0 12 37.167308604699954 39.0 37.0 39.0 33.0 39.0 13 37.22326999642749 39.0 37.0 39.0 34.0 39.0 14 38.33638676572234 40.0 38.0 41.0 34.0 41.0 15 38.290951981606945 40.0 38.0 41.0 34.0 41.0 16 38.18840025429693 40.0 38.0 41.0 33.0 41.0 17 38.12694715777814 40.0 38.0 41.0 33.0 41.0 18 38.063337010851725 40.0 37.0 41.0 33.0 41.0 19 38.058838929104965 40.0 37.0 41.0 33.0 41.0 20 37.91788055227043 40.0 37.0 41.0 33.0 41.0 21 37.819897474735704 40.0 37.0 41.0 33.0 41.0 22 37.74703125974642 40.0 37.0 41.0 32.0 41.0 23 37.603476987576876 39.0 37.0 41.0 32.0 41.0 24 37.476642297594196 39.0 37.0 41.0 32.0 41.0 25 37.36679969580139 39.0 37.0 41.0 31.0 41.0 26 36.95366137805498 39.0 36.0 40.0 31.0 41.0 27 36.70356324439032 39.0 36.0 40.0 30.0 41.0 28 36.484614279566586 39.0 36.0 40.0 30.0 41.0 29 36.439208478748625 39.0 36.0 40.0 30.0 41.0 30 36.35588653921157 39.0 35.0 40.0 30.0 41.0 31 36.131025296748014 39.0 35.0 40.0 29.0 41.0 32 36.014689491223415 39.0 35.0 40.0 28.0 41.0 33 35.80996849011512 38.0 35.0 40.0 27.0 41.0 34 35.639486214346604 38.0 35.0 40.0 26.0 41.0 35 35.46632014824326 38.0 34.0 40.0 26.0 41.0 36 35.270456694858176 38.0 34.0 40.0 25.0 41.0 37 35.02086513882684 38.0 34.0 40.0 24.0 41.0 38 34.889255765628455 38.0 33.0 40.0 24.0 41.0 39 34.691082784488394 38.0 33.0 40.0 23.0 41.0 40 34.55844450423125 38.0 33.0 40.0 23.0 41.0 41 34.39328412893535 38.0 33.0 40.0 23.0 41.0 42 34.18436117977142 38.0 33.0 40.0 22.0 41.0 43 30.514096593769473 34.0 26.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 11.0 11 20.0 12 13.0 13 16.0 14 33.0 15 80.0 16 164.0 17 290.0 18 585.0 19 1213.0 20 2428.0 21 4285.0 22 7344.0 23 11376.0 24 16663.0 25 23394.0 26 31037.0 27 39594.0 28 50013.0 29 62442.0 30 76837.0 31 94844.0 32 115208.0 33 142318.0 34 180954.0 35 232589.0 36 317151.0 37 479885.0 38 809321.0 39 474133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1778541144626 15.746404968493266 11.533336147653518 28.54240476939061 2 20.34986620427806 19.314248882095317 32.20954798027372 28.126336933352906 3 19.77023175926725 19.936759705151655 29.372555715663772 30.920452819917323 4 16.42867809070638 14.001452945301587 30.211401651165854 39.35846731282618 5 16.09697685305657 35.3572285918969 32.608162830685245 15.937631724361282 6 40.165872671333815 31.68624194374594 12.574750129322213 15.57313525559803 7 32.54966067489498 29.44076097537617 18.042165657186818 19.96741269254203 8 30.641173546314366 32.9128339931234 17.35412737907192 19.091865081490322 9 29.003900773791035 12.286807370074493 15.501779637469355 43.207512218665116 10 16.90324808253435 25.870711810882725 31.594030952901512 25.632009153681413 11 40.26473091843659 19.038119966908635 18.483719892812207 22.213429221842567 12 23.636162586217434 23.028994008648365 26.99091625654251 26.343927148591696 13 34.70318268109363 17.237312088996365 21.246080166540548 26.81342506336946 14 24.228429968477514 18.10123487749201 22.953385406657713 34.71694974737276 15 29.236775267922233 25.0456959488281 19.339357238673045 26.378171544576627 16 27.52395690057658 23.65122129944724 21.799440622359604 27.025381177616577 17 27.133690499968182 23.389174486381314 22.255423499531542 27.22171151411896 18 26.939344889268053 23.385362552697618 23.103720510282454 26.571572047751875 19 28.74481529763641 23.07615487414003 22.489463626276763 25.689566201946796 20 27.400651872163493 22.37627124837993 22.614879394828748 27.608197484627826 21 27.098091449864253 23.40253200606633 22.922102347584083 26.577274196485334 22 28.44524771583263 22.331095108690516 21.420578519218132 27.803078656258723 23 27.261217008659077 22.604168176213406 22.45364405108369 27.680970764043828 24 26.8311615812531 22.241687936836573 22.629623072216926 28.2975274096934 25 27.708032342839644 21.587988565459092 22.19638578281051 28.507593308890755 26 27.19420888514486 22.11567360018549 23.10034962677704 27.58976788789261 27 28.63527733550246 22.368080316497608 22.331347137363817 26.665295210636113 28 27.26767524341244 23.45186661886523 21.767590498771046 27.51286763895128 29 27.293823218267544 23.10665034360959 22.672247421589155 26.92727901653371 30 28.17456892070611 22.53142640038157 22.20183590287067 27.092168776041653 31 27.438046626564706 22.274514671534178 22.536592988184264 27.75084571371685 32 26.889033665360106 22.459629732074617 22.458716128133897 28.192620474431372 33 27.213678100157455 22.184603442333632 22.60158488231206 28.000133575196852 34 27.647545461247127 22.303340451043116 23.211903818297408 26.837210269412353 35 27.308314866982414 22.227794856220793 22.95058158766723 27.513308689129563 36 26.72518352412954 21.659501701508578 23.850197937019292 27.765116837342585 37 26.272193487453066 21.746987154728593 24.172448099420272 27.80837125839807 38 26.913763978927886 21.139377526981246 24.03345428609413 27.913404207996745 39 25.670317512023345 21.37915130604409 25.105741780242337 27.844789401690228 40 26.867170177951145 20.628515406197764 25.219028668891657 27.28528574695943 41 25.805121348655835 21.036770353363103 25.575208191435937 27.58290010654512 42 25.09846445230074 20.904864846473583 26.24424980830069 27.752420892924988 43 25.12839285725537 19.938933452458887 25.69586691877935 29.236806771506394 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 53.0 1 68.5 2 84.0 3 275.5 4 467.0 5 467.0 6 548.5 7 630.0 8 587.0 9 544.0 10 761.0 11 978.0 12 978.0 13 2107.5 14 3237.0 15 6295.5 16 9354.0 17 6549.0 18 3744.0 19 3744.0 20 4397.0 21 5050.0 22 3965.0 23 2880.0 24 3827.0 25 4774.0 26 4774.0 27 6159.0 28 7544.0 29 9589.5 30 11635.0 31 14735.5 32 17836.0 33 17836.0 34 22815.5 35 27795.0 36 35813.0 37 43831.0 38 56131.5 39 68432.0 40 68432.0 41 84072.5 42 99713.0 43 121010.0 44 142307.0 45 171281.0 46 200255.0 47 200255.0 48 235538.5 49 270822.0 50 300919.5 51 331017.0 52 346293.0 53 361569.0 54 361569.0 55 342477.5 56 323386.0 57 305858.5 58 288331.0 59 274601.0 60 260871.0 61 260871.0 62 233397.0 63 205923.0 64 177271.0 65 148619.0 66 127049.0 67 105479.0 68 105479.0 69 88674.5 70 71870.0 71 61616.5 72 51363.0 73 43504.0 74 35645.0 75 35645.0 76 30224.5 77 24804.0 78 20887.0 79 16970.0 80 13792.5 81 10615.0 82 10615.0 83 8589.5 84 6564.0 85 5288.0 86 4012.0 87 3401.5 88 2791.0 89 2791.0 90 2104.0 91 1417.0 92 1039.0 93 661.0 94 457.5 95 254.0 96 254.0 97 169.5 98 85.0 99 58.0 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3174242.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.0231602341951 #Duplication Level Percentage of deduplicated Percentage of total 1 83.31749469745027 50.00979334536759 2 8.941349765325036 10.733761393481748 3 2.8580069614077566 5.146398293850686 4 1.4217479417830754 3.4135121808913054 5 0.8040741935975171 2.4131537081242493 6 0.5240690582790525 1.8873768635320378 7 0.3677642567110586 1.5452061036284273 8 0.2665215417826999 1.2797972166630174 9 0.21136792390622325 1.1418273688493157 >10 1.1756873663254084 12.716422831875681 >50 0.07083530179941648 2.912558499127053 >100 0.03662112120947699 4.026992614095488 >500 0.0031481438294450586 1.2592397122296233 >1k 0.0012592575298359515 1.2957407817607727 >5k 5.2469063743164645E-5 0.2182190865231119 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6929 0.2182883346638347 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 3617 0.11394846391673981 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.15035841627702E-5 0.0 0.0 0.0 6 0.0 3.15035841627702E-5 0.0 0.0 3.15035841627702E-5 7 0.0 3.15035841627702E-5 0.0 0.0 9.45107524883106E-5 8 0.0 3.15035841627702E-5 0.0 0.0 9.45107524883106E-5 9 0.0 3.15035841627702E-5 0.0 0.0 2.520286733021616E-4 10 3.15035841627702E-5 3.15035841627702E-5 0.0 3.15035841627702E-5 2.520286733021616E-4 11 6.30071683255404E-5 3.15035841627702E-5 0.0 3.15035841627702E-5 2.520286733021616E-4 12 9.45107524883106E-5 3.15035841627702E-5 0.0 6.30071683255404E-5 2.520286733021616E-4 13 9.45107524883106E-5 3.15035841627702E-5 0.0 6.30071683255404E-5 2.520286733021616E-4 14 1.890215049766212E-4 3.15035841627702E-5 0.0 6.30071683255404E-5 3.780430099532424E-4 15 2.2052508913939138E-4 3.15035841627702E-5 0.0 1.5751792081385098E-4 3.780430099532424E-4 16 2.2052508913939138E-4 3.15035841627702E-5 0.0 3.1503584162770196E-4 5.985680990926338E-4 17 2.2052508913939138E-4 3.15035841627702E-5 0.0 5.985680990926338E-4 5.985680990926338E-4 18 2.2052508913939138E-4 3.15035841627702E-5 0.0 6.300716832554039E-4 6.930788515809444E-4 19 3.465394257904722E-4 3.15035841627702E-5 0.0 9.136039407203358E-4 7.245824357437145E-4 20 3.465394257904722E-4 3.15035841627702E-5 0.0 0.0013231505348363483 7.245824357437145E-4 21 3.465394257904722E-4 3.15035841627702E-5 0.0 0.002488783148858846 7.87589604069255E-4 22 3.780430099532424E-4 3.15035841627702E-5 0.0 0.004505012535276139 7.87589604069255E-4 23 3.780430099532424E-4 3.15035841627702E-5 0.0 0.005733652317624176 9.136039407203358E-4 24 3.780430099532424E-4 6.30071683255404E-5 0.0 0.00787589604069255 9.45107524883106E-4 25 3.780430099532424E-4 9.45107524883106E-5 0.0 0.009388068080505518 9.45107524883106E-4 26 3.780430099532424E-4 9.45107524883106E-5 0.0 0.011561815387736664 9.766111090458761E-4 27 4.0954659411601257E-4 9.45107524883106E-5 0.0 0.016318856596314962 0.0010081146932086464 28 4.0954659411601257E-4 9.45107524883106E-5 0.0 0.042372320698925915 0.0010081146932086464 29 4.0954659411601257E-4 9.45107524883106E-5 0.0 0.10944345138146366 0.0010081146932086464 30 4.0954659411601257E-4 9.45107524883106E-5 0.0 0.20474179347384353 0.0010081146932086464 31 4.0954659411601257E-4 9.45107524883106E-5 0.0 0.49551987529621244 0.0010081146932086464 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATATA 190 0.0 19.473684 36 TACTTAC 505 0.0 19.41584 31 CTTATAC 1735 0.0 18.8732 37 TCTATAC 170 0.0 18.5 3 TATACCG 135 1.1550583E-9 17.814814 5 CGTTATG 225 0.0 16.444445 24 CTCGTTA 890 0.0 16.421349 22 TTACGGG 430 0.0 16.348837 26 TCGTTAC 770 0.0 15.616882 23 GTCTTAG 345 0.0 15.550724 1 ATTACGG 660 0.0 15.416667 25 ATTATAC 120 1.9380168E-6 15.416667 3 TACATAT 265 0.0 15.358491 35 GTGTACT 760 0.0 15.335526 28 AGTGTAC 870 0.0 15.310346 27 TCTTATA 2895 0.0 15.2089815 37 CATTACG 615 0.0 15.04065 24 ATCTCGT 1190 0.0 14.924371 20 GTAAGTA 685 0.0 14.583941 2 TTACATA 305 0.0 14.557377 34 >>END_MODULE