##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727291.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7613328 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10846623185025 33.0 31.0 34.0 30.0 34.0 2 32.24702390334424 33.0 31.0 34.0 30.0 34.0 3 32.3275236532565 34.0 31.0 34.0 30.0 34.0 4 35.91515720851643 37.0 35.0 37.0 35.0 37.0 5 35.783577168880676 37.0 35.0 37.0 35.0 37.0 6 35.8066683847064 37.0 35.0 37.0 35.0 37.0 7 35.7344735442897 37.0 35.0 37.0 35.0 37.0 8 35.700931051440314 37.0 35.0 37.0 33.0 37.0 9 37.437735639394496 39.0 37.0 39.0 35.0 39.0 10 37.27858802352927 39.0 37.0 39.0 34.0 39.0 11 37.38491090886929 39.0 37.0 39.0 34.0 39.0 12 37.280365038784616 39.0 37.0 39.0 34.0 39.0 13 37.332538936979994 39.0 37.0 39.0 34.0 39.0 14 38.464630316728766 40.0 38.0 41.0 34.0 41.0 15 38.42875192031658 40.0 38.0 41.0 34.0 41.0 16 38.336228387900796 40.0 38.0 41.0 34.0 41.0 17 38.282802737515055 40.0 38.0 41.0 33.0 41.0 18 38.235354499372676 40.0 38.0 41.0 33.0 41.0 19 38.232804497586336 40.0 38.0 41.0 34.0 41.0 20 38.11041413163862 40.0 38.0 41.0 33.0 41.0 21 38.018159732511194 40.0 37.0 41.0 33.0 41.0 22 37.94163577347515 40.0 37.0 41.0 33.0 41.0 23 37.80770262360954 40.0 37.0 41.0 33.0 41.0 24 37.68761348519333 40.0 37.0 41.0 32.0 41.0 25 37.59472204533944 40.0 37.0 41.0 32.0 41.0 26 37.20149624448073 39.0 37.0 41.0 31.0 41.0 27 36.97031744855863 39.0 36.0 40.0 30.0 41.0 28 36.77683228674766 39.0 36.0 40.0 30.0 41.0 29 36.729143812009674 39.0 36.0 40.0 30.0 41.0 30 36.636666514302284 39.0 36.0 40.0 30.0 41.0 31 36.421305899338634 39.0 35.0 40.0 30.0 41.0 32 36.29051119300259 39.0 35.0 40.0 30.0 41.0 33 36.10096162939519 39.0 35.0 40.0 28.0 41.0 34 35.93905648095025 38.0 35.0 40.0 27.0 41.0 35 35.77001187916769 38.0 35.0 40.0 27.0 41.0 36 35.58600168021133 38.0 35.0 40.0 26.0 41.0 37 35.34261508239235 38.0 34.0 40.0 25.0 41.0 38 35.21248591942972 38.0 34.0 40.0 25.0 41.0 39 35.03463111007433 38.0 34.0 40.0 24.0 41.0 40 34.88896866127402 38.0 33.0 40.0 24.0 41.0 41 34.72306421055286 38.0 33.0 40.0 23.0 41.0 42 34.50082263630307 38.0 33.0 40.0 23.0 41.0 43 30.85999066374127 35.0 27.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 34.0 11 51.0 12 58.0 13 51.0 14 86.0 15 172.0 16 342.0 17 628.0 18 1218.0 19 2445.0 20 4716.0 21 8862.0 22 14953.0 23 23651.0 24 35420.0 25 48906.0 26 65798.0 27 85257.0 28 109009.0 29 136652.0 30 169040.0 31 209692.0 32 258822.0 33 322154.0 34 410910.0 35 535012.0 36 742021.0 37 1143675.0 38 1978172.0 39 1305513.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.95868666107647 16.54360616014442 12.036877959284034 27.460829219495075 2 19.49323607231949 20.14682672282082 33.01352575378336 27.346411451076325 3 19.497662520253954 20.734073193746546 29.603663470167053 30.164600815832443 4 15.62805385502897 14.350885709902425 31.19602885886435 38.82503157620425 5 15.646968053918076 35.90125106917763 32.97626215499976 15.475518721904532 6 39.054734013824174 32.82245294042237 12.812241899994326 15.310571145759122 7 31.932224646041785 29.57551546445917 18.626020053253978 19.86623983624507 8 30.152293451694185 33.48318895494848 17.67286264298609 18.691654950371245 9 28.122904989775826 12.852946832186923 16.1163685578764 42.90777962016086 10 16.586044893901853 26.467124495358668 32.010429604504104 24.936401006235382 11 39.35862214264248 19.617018996160418 19.02425588389204 22.000102977305065 12 23.14974476339388 23.85691250922067 27.759056223506988 25.23428650387846 13 34.21386810078326 17.629727761630658 21.885908501512084 26.270495636074 14 23.798370436686824 18.45937808012475 23.94047649070157 33.80177499248686 15 28.283399848266093 25.695241292638382 20.03663837943144 25.984720479664087 16 26.94297421574376 23.935642862096575 22.391088365035632 26.730294557124033 17 26.357921266494756 24.27255202980878 23.390506753419793 25.979019950276673 18 26.37125314973951 23.40553303364836 24.201820806879727 26.021393009732407 19 27.52240544476739 23.805371317247857 23.497122414796788 25.175100823187968 20 26.8035476732383 23.162695735688782 23.535147835480092 26.498608755592823 21 26.352128793084965 24.07524015778645 23.398978738338872 26.17365231078971 22 27.342812499343257 23.289736104893944 22.469109435453195 26.8983419603096 23 26.52109563649432 23.169407649322345 23.10079113890798 27.20870557527536 24 26.343013200009246 23.05322980961808 23.244814882532317 27.358942107840356 25 26.90676140578733 22.534218938156876 23.022848877652454 27.536170778403346 26 26.4796551521227 22.88667978051123 23.826203205746555 26.80746186161952 27 27.50774694062833 23.179377008320145 23.304328934731302 26.008547116320223 28 26.706953910300463 23.757718043935583 23.059258710513983 26.476069335249974 29 26.43230398059824 23.662253878986956 23.63872934411863 26.266712796296183 30 26.721848841925635 23.51783608955243 23.359666101342277 26.400648967179663 31 26.42641956316607 22.930090493933797 23.39400062627014 27.249489316629994 32 25.88879659460357 23.32361090970992 23.48679841456982 27.300794081116692 33 26.461818011781446 23.049827880790108 23.380143348611803 27.108210758816643 34 26.679291894425145 23.067940853198497 23.897814464318365 26.354952788057993 35 26.363332828954693 23.113742111202882 23.966733076520544 26.55619198332188 36 25.931051440316246 22.656688375963835 24.45352413556857 26.958736048151348 37 25.43815267121028 22.45206038673232 24.721619769961308 27.388167172096097 38 25.696397160348273 22.191110116364353 25.024155008164627 27.08833771512274 39 25.095070119138434 22.032966397874883 25.657110793072356 27.21485268991432 40 25.7336344894112 21.717073006706133 26.0483851477304 26.500907356152265 41 25.078704083155223 21.707405749496147 26.368875740018034 26.8450144273306 42 24.343913726034135 21.762401409738292 26.892562621760156 27.001122242467417 43 24.51373433536556 20.74582889375054 26.625544045915266 28.114892724968634 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 115.0 1 231.0 2 347.0 3 1235.0 4 2123.0 5 2123.0 6 2484.5 7 2846.0 8 2772.0 9 2698.0 10 3796.5 11 4895.0 12 4895.0 13 10999.0 14 17103.0 15 33589.5 16 50076.0 17 34519.5 18 18963.0 19 18963.0 20 21745.0 21 24527.0 22 18694.5 23 12862.0 24 16427.0 25 19992.0 26 19992.0 27 26017.0 28 32042.0 29 39449.0 30 46856.0 31 57720.5 32 68585.0 33 68585.0 34 84978.5 35 101372.0 36 126551.0 37 151730.0 38 185507.5 39 219285.0 40 219285.0 41 260552.0 42 301819.0 43 349955.0 44 398091.0 45 457585.0 46 517079.0 47 517079.0 48 585904.5 49 654730.0 50 703451.5 51 752173.0 52 783908.5 53 815644.0 54 815644.0 55 771225.0 56 726806.0 57 677901.0 58 628996.0 59 592965.0 60 556934.0 61 556934.0 62 499338.5 63 441743.0 64 382306.0 65 322869.0 66 276630.0 67 230391.0 68 230391.0 69 193510.5 70 156630.0 71 135122.5 72 113615.0 73 95148.0 74 76681.0 75 76681.0 76 64706.0 77 52731.0 78 44450.0 79 36169.0 80 28982.0 81 21795.0 82 21795.0 83 17592.0 84 13389.0 85 10773.0 86 8157.0 87 6799.0 88 5441.0 89 5441.0 90 4091.5 91 2742.0 92 2036.0 93 1330.0 94 984.5 95 639.0 96 639.0 97 425.0 98 211.0 99 158.5 100 106.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7613328.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.89635139518387 #Duplication Level Percentage of deduplicated Percentage of total 1 80.9264324853915 42.807130099058924 2 9.744268182001479 10.308724676881194 3 3.3762489063296064 5.357737456404483 4 1.6565003143114154 3.504912908481966 5 0.9774654476758879 2.585217789845724 6 0.6295274610164011 1.9979823474504883 7 0.443656983113715 1.642748497439716 8 0.3123482196633516 1.321766494797818 9 0.24161609441192153 1.150254884947043 >10 1.5076938501457526 14.998469593335084 >50 0.12069838218403726 4.391404387611285 >100 0.057753445759575056 5.470077404376418 >500 0.003678097162108442 1.292096757745027 >1k 0.001863644858457727 1.7167511985093618 >5k 1.7394018233186183E-4 0.6897314754416969 >10k+ 7.454579242794077E-5 0.7649940276737914 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36998 0.48596356284662895 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10666 0.14009642038278136 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 10537 0.13840202339896562 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9910 0.13016646596600068 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8359 0.1097942975791927 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.313486033965698E-5 0.0 0.0 0.0 2.626972067931396E-5 7 2.626972067931396E-5 0.0 1.313486033965698E-5 0.0 2.626972067931396E-5 8 5.253944135862792E-5 0.0 1.313486033965698E-5 0.0 2.626972067931396E-5 9 5.253944135862792E-5 0.0 1.313486033965698E-5 0.0 9.194402237759886E-5 10 1.7075318441554075E-4 0.0 1.313486033965698E-5 0.0 9.194402237759886E-5 11 1.8388804475519773E-4 0.0 1.313486033965698E-5 1.313486033965698E-5 9.194402237759886E-5 12 1.8388804475519773E-4 0.0 1.313486033965698E-5 2.626972067931396E-5 9.194402237759886E-5 13 1.970229050948547E-4 0.0 1.313486033965698E-5 7.880916203794189E-5 9.194402237759886E-5 14 2.2329262577416866E-4 0.0 1.313486033965698E-5 9.194402237759886E-5 1.970229050948547E-4 15 2.3642748611382564E-4 0.0 1.313486033965698E-5 1.7075318441554075E-4 2.1015776543451169E-4 16 2.4956234645348265E-4 0.0 1.313486033965698E-5 3.940458101897094E-4 2.889669274724536E-4 17 2.4956234645348265E-4 0.0 1.313486033965698E-5 8.931705030966747E-4 3.0210178781211056E-4 18 2.4956234645348265E-4 0.0 1.313486033965698E-5 0.0011164631288708433 3.283715084914245E-4 19 2.889669274724536E-4 0.0 1.313486033965698E-5 0.0018651501682312912 3.283715084914245E-4 20 3.1523664815176754E-4 0.0 1.313486033965698E-5 0.0028502646937055647 3.415063688310815E-4 21 3.6777608951039546E-4 0.0 1.313486033965698E-5 0.005004381789409309 3.546412291707385E-4 22 4.071806705293664E-4 0.0 1.313486033965698E-5 0.008445715198399439 3.546412291707385E-4 23 4.071806705293664E-4 0.0 1.313486033965698E-5 0.010652371735461812 4.597201118879943E-4 24 4.071806705293664E-4 0.0 1.313486033965698E-5 0.015026280228567586 4.597201118879943E-4 25 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.018191781570424916 4.597201118879943E-4 26 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.022040295649944412 4.728549722276513E-4 27 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.028003522244148683 4.728549722276513E-4 28 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.05737306996362169 4.728549722276513E-4 29 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.12961480183173507 4.728549722276513E-4 30 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.2359283614209187 4.728549722276513E-4 31 4.071806705293664E-4 1.313486033965698E-5 1.313486033965698E-5 0.5494180731475118 4.8598983256730827E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4705 0.0 18.087141 37 TTAATAC 525 0.0 16.914286 3 TAATACC 435 0.0 15.310346 4 TCTTATA 7585 0.0 14.707315 37 ATACTAG 315 0.0 14.68254 1 TATACCG 305 0.0 14.557377 5 GAGTACT 9920 0.0 14.397178 11 AGTACTT 10030 0.0 14.239282 12 TCTATAC 520 0.0 14.230769 3 GTCTTAG 1185 0.0 13.894514 1 GTACTTT 10325 0.0 13.760775 13 TACTTTT 10305 0.0 13.7336235 14 TCGTTAC 1230 0.0 13.536586 23 GTATAAG 590 0.0 13.483052 1 TAGATCG 270 3.6379788E-12 13.0185175 5 CTCTTAT 12100 0.0 12.995869 37 CGTTACG 1125 0.0 12.826667 24 ACTTTTT 11190 0.0 12.779715 15 ATTACGG 870 0.0 12.758621 25 TACTTAC 1045 0.0 12.569378 31 >>END_MODULE