##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727285.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8048493 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03510371444692 33.0 31.0 34.0 30.0 34.0 2 32.17980409500263 33.0 31.0 34.0 30.0 34.0 3 32.25925462070974 34.0 31.0 34.0 30.0 34.0 4 35.86944139729015 37.0 35.0 37.0 35.0 37.0 5 35.7340628860583 37.0 35.0 37.0 35.0 37.0 6 35.74566642475803 37.0 35.0 37.0 35.0 37.0 7 35.68608185408125 37.0 35.0 37.0 33.0 37.0 8 35.64444561236495 37.0 35.0 37.0 33.0 37.0 9 37.37119358866312 39.0 37.0 39.0 34.0 39.0 10 37.18743247959587 39.0 37.0 39.0 34.0 39.0 11 37.3045139009253 39.0 37.0 39.0 34.0 39.0 12 37.193827341342036 39.0 37.0 39.0 34.0 39.0 13 37.253904675073954 39.0 37.0 39.0 34.0 39.0 14 38.380784949430904 40.0 38.0 41.0 34.0 41.0 15 38.338607239889505 40.0 38.0 41.0 34.0 41.0 16 38.252839258231326 40.0 38.0 41.0 33.0 41.0 17 38.19875161722822 40.0 38.0 41.0 33.0 41.0 18 38.13089357225011 40.0 38.0 41.0 33.0 41.0 19 38.12906279473685 40.0 38.0 41.0 33.0 41.0 20 37.99425122193683 40.0 37.0 41.0 33.0 41.0 21 37.90486355644467 40.0 37.0 41.0 33.0 41.0 22 37.829637299802584 40.0 37.0 41.0 33.0 41.0 23 37.69792630744662 40.0 37.0 41.0 32.0 41.0 24 37.57151270430377 39.0 37.0 41.0 32.0 41.0 25 37.47387467442663 39.0 37.0 41.0 32.0 41.0 26 37.079521719159104 39.0 36.0 40.0 31.0 41.0 27 36.84863886941319 39.0 36.0 40.0 30.0 41.0 28 36.655252977172246 39.0 36.0 40.0 30.0 41.0 29 36.61851529224167 39.0 36.0 40.0 30.0 41.0 30 36.539242812287966 39.0 36.0 40.0 30.0 41.0 31 36.32307650637206 39.0 35.0 40.0 30.0 41.0 32 36.20465533112845 39.0 35.0 40.0 29.0 41.0 33 36.016161907576986 38.0 35.0 40.0 28.0 41.0 34 35.86395353763742 38.0 35.0 40.0 27.0 41.0 35 35.69399998235694 38.0 35.0 40.0 27.0 41.0 36 35.50727359767847 38.0 34.0 40.0 26.0 41.0 37 35.26241185772293 38.0 34.0 40.0 25.0 41.0 38 35.13185375200053 38.0 34.0 40.0 25.0 41.0 39 34.95006767105345 38.0 34.0 40.0 24.0 41.0 40 34.81887354564389 38.0 33.0 40.0 24.0 41.0 41 34.661261679670964 38.0 33.0 40.0 23.0 41.0 42 34.44935542591638 38.0 33.0 40.0 23.0 41.0 43 30.840073539232748 35.0 27.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 27.0 11 29.0 12 35.0 13 42.0 14 86.0 15 155.0 16 348.0 17 711.0 18 1307.0 19 2730.0 20 5211.0 21 9564.0 22 16204.0 23 25946.0 24 37885.0 25 53847.0 26 71887.0 27 93271.0 28 119199.0 29 149605.0 30 186243.0 31 230217.0 32 282917.0 33 350815.0 34 445138.0 35 580154.0 36 798742.0 37 1220857.0 38 2109525.0 39 1255786.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.56175746192486 17.073109214358514 11.885343007691004 27.47979031602562 2 19.614678176398986 20.279374039338794 33.10158808611749 27.004359698144732 3 19.0561885311946 20.962856027830306 29.874350390812292 30.106605050162806 4 15.574965400355072 14.612213739888947 31.82800805069968 37.98481280905631 5 15.27206397520629 36.405237601623064 33.31083222660441 15.01186619656624 6 38.676532364506 33.63101639027331 12.966974065828223 14.725477179392465 7 32.00534559699561 30.16280190589717 18.705340241955852 19.12651225515137 8 29.872399715077098 34.05718312732582 17.628542386754887 18.441874770842194 9 28.537715072871407 12.67731735618084 16.015432951236956 42.7695346197108 10 16.1391455518443 26.83779435479412 32.35715058707264 24.66590950628894 11 39.703432679881814 19.74944874773451 19.208763677871126 21.338354894512552 12 23.080954409726143 23.93569827295619 27.77483933948877 25.20850797782889 13 33.68023057235684 18.094405996252963 21.847593083574775 26.37777034781542 14 23.647805868750833 18.68189485907486 23.635058140697893 34.03524113147641 15 27.926370812523537 26.28584009453695 19.864203149583407 25.923585943356102 16 26.868185137267314 24.72452917583453 21.971678424768463 26.435607262129697 17 26.461127567608 24.38452763765838 22.846513005602414 26.307831789131207 18 26.32351174313005 24.14104106197272 23.57082251298473 25.9646246819125 19 27.898539515409905 23.78539684385636 23.123123794727785 25.192939846005952 20 26.904800687532436 23.478668615354454 23.08662006663856 26.52991063047455 21 26.65854340682163 24.12942398036502 23.27185971336497 25.94017289944838 22 27.643597379037292 23.312314491669433 22.172523477376448 26.871564651916824 23 26.622263323084212 23.599784456543603 22.879376300631684 26.8985759197405 24 26.364401385451906 23.249905292829354 22.957552426274084 27.428140895444653 25 26.94253445955659 22.759639599612 22.85327203490144 27.44455390592997 26 26.549392538454093 23.19109925299059 23.40161071147108 26.857897497084238 27 27.494302349520588 23.43683469688052 22.810195647806367 26.258667305792528 28 26.533314994496486 24.200654706415225 22.581270804360518 26.68475949472777 29 26.620759936052625 24.11953393014071 22.95715483631532 26.302551297491345 30 27.26796184080672 23.82595101965051 22.517668835644137 26.388418303898632 31 26.64999522270815 23.38450191855792 22.913308118675136 27.052194740058795 32 26.013254903744095 23.706326140806734 22.873027285977635 27.407391669471536 33 26.340906303826074 23.37766834114163 23.060751869946337 27.220673485085968 34 26.753629530397806 23.242587152650813 23.678109678420544 26.325673638530837 35 26.593562297935776 23.28120307739598 23.414656631993093 26.710577992675148 36 26.089865518923855 22.787967884174094 24.11489952218384 27.00726707471821 37 25.810943738163157 22.751402032653814 24.303965972263377 27.133688256919648 38 26.044304194586488 22.37971754463848 24.41838490758456 27.157593353190467 39 25.138258801989394 22.454700525924544 25.216049762359237 27.190990909726825 40 25.934233899439313 21.989669370402634 25.455386492850273 26.620710237307783 41 25.070320617785217 22.07536243120296 25.90496133872515 26.949355612286674 42 24.495678880505952 22.093229129975015 26.342061799643734 27.0690301898753 43 24.58153346222703 21.076927071937565 25.9808016233598 28.360737842475604 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 115.0 1 186.5 2 258.0 3 731.0 4 1204.0 5 1204.0 6 1433.0 7 1662.0 8 1688.5 9 1715.0 10 2413.5 11 3112.0 12 3112.0 13 6637.0 14 10162.0 15 18630.0 16 27098.0 17 19946.5 18 12795.0 19 12795.0 20 15685.5 21 18576.0 22 16097.0 23 13618.0 24 18062.5 25 22507.0 26 22507.0 27 29387.0 28 36267.0 29 44497.5 30 52728.0 31 65488.0 32 78248.0 33 78248.0 34 96925.0 35 115602.0 36 142317.0 37 169032.0 38 207385.0 39 245738.0 40 245738.0 41 288607.5 42 331477.0 43 382975.0 44 434473.0 45 500154.0 46 565835.0 47 565835.0 48 634129.5 49 702424.0 50 752405.0 51 802386.0 52 818517.0 53 834648.0 54 834648.0 55 802650.5 56 770653.0 57 729105.5 58 687558.0 59 650402.0 60 613246.0 61 613246.0 62 542089.5 63 470933.0 64 401948.0 65 332963.0 66 283282.5 67 233602.0 68 233602.0 69 194023.5 70 154445.0 71 130703.0 72 106961.0 73 88167.0 74 69373.0 75 69373.0 76 57894.5 77 46416.0 78 39228.0 79 32040.0 80 25654.0 81 19268.0 82 19268.0 83 15688.5 84 12109.0 85 9788.5 86 7468.0 87 6315.0 88 5162.0 89 5162.0 90 3889.0 91 2616.0 92 1900.5 93 1185.0 94 875.0 95 565.0 96 565.0 97 373.5 98 182.0 99 125.0 100 68.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8048493.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.794510057771916 #Duplication Level Percentage of deduplicated Percentage of total 1 81.31591034534593 42.93033646584245 2 9.403684012479346 9.929257803538995 3 3.3141583145904367 5.249080934180796 4 1.6024780868928823 3.384081819033015 5 0.9570861035910295 2.526444596109517 6 0.6531061989412488 2.068825307327816 7 0.43892848766969417 1.62211101198442 8 0.31190196248088303 1.317336903618862 9 0.2595345299055148 1.2331798514492225 >10 1.5409220617122117 15.341828295573507 >50 0.13289304805495195 4.804405155856548 >100 0.06364609631262605 6.00724913770197 >500 0.0038654937269831497 1.4027560005993713 >1k 0.0018145611172400765 1.8216091150354476 >5k 4.7131452690603895E-5 0.13487732326840823 >10k+ 2.3565726345301947E-5 0.2266202788796288 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18215 0.2263156593414444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.7274058634330677E-5 2 0.0 0.0 0.0 0.0 3.7274058634330677E-5 3 1.2424686211443559E-5 0.0 0.0 0.0 3.7274058634330677E-5 4 1.2424686211443559E-5 0.0 0.0 0.0 3.7274058634330677E-5 5 1.2424686211443559E-5 0.0 0.0 0.0 3.7274058634330677E-5 6 1.2424686211443559E-5 0.0 0.0 0.0 9.939748969154847E-5 7 2.4849372422887118E-5 0.0 0.0 0.0 9.939748969154847E-5 8 2.4849372422887118E-5 0.0 0.0 0.0 1.242468621144356E-4 9 3.7274058634330677E-5 0.0 0.0 0.0 1.8637029317165337E-4 10 9.939748969154847E-5 0.0 0.0 0.0 1.9879497938309694E-4 11 1.1182217590299203E-4 0.0 0.0 2.4849372422887118E-5 1.9879497938309694E-4 12 1.242468621144356E-4 0.0 0.0 2.4849372422887118E-5 1.9879497938309694E-4 13 1.242468621144356E-4 0.0 0.0 2.4849372422887118E-5 2.360690380174276E-4 14 1.3667154832587913E-4 0.0 0.0 3.7274058634330677E-5 3.975899587661939E-4 15 1.3667154832587913E-4 0.0 0.0 4.9698744845774235E-5 3.975899587661939E-4 16 1.3667154832587913E-4 0.0 0.0 3.230418414975325E-4 4.22439331189081E-4 17 1.3667154832587913E-4 0.0 0.0 6.088096243607343E-4 4.22439331189081E-4 18 1.3667154832587913E-4 0.0 0.0 7.082071140522828E-4 4.721380760348552E-4 19 1.490962345373227E-4 0.0 0.0 9.81550210704041E-4 4.721380760348552E-4 20 1.6152092074876625E-4 0.0 0.0 0.0016276338936991061 4.721380760348552E-4 21 1.8637029317165337E-4 0.0 0.0 0.0028079790837862444 4.969874484577424E-4 22 1.8637029317165337E-4 0.0 0.0 0.004547435153388343 5.094121346691858E-4 23 1.8637029317165337E-4 0.0 0.0 0.005491711305458053 6.336589967836215E-4 24 1.8637029317165337E-4 0.0 0.0 0.007256016747483038 6.336589967836215E-4 25 1.8637029317165337E-4 1.2424686211443559E-5 0.0 0.008175443527129862 6.46083682995065E-4 26 1.9879497938309694E-4 1.2424686211443559E-5 0.0 0.00946761089311999 6.585083692065086E-4 27 1.9879497938309694E-4 1.2424686211443559E-5 0.0 0.013120468639284398 6.585083692065086E-4 28 1.9879497938309694E-4 2.4849372422887118E-5 0.0 0.03599431595455199 6.833577416293957E-4 29 1.9879497938309694E-4 2.4849372422887118E-5 0.0 0.09453943738287404 6.957824278408393E-4 30 1.9879497938309694E-4 2.4849372422887118E-5 0.0 0.17585900863677212 6.957824278408393E-4 31 1.9879497938309694E-4 2.4849372422887118E-5 0.0 0.46308047978671285 6.957824278408393E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4310 0.0 19.358469 37 TACTTAC 1145 0.0 16.480349 31 TCTTATA 7575 0.0 15.532673 37 GTATAGA 580 0.0 14.991379 1 GTCTTAG 1185 0.0 14.831224 1 TCGTTAC 1545 0.0 14.249192 23 GGGTAAG 5650 0.0 14.046903 1 CTCGTTA 1835 0.0 14.013624 22 GAGTACT 5365 0.0 13.620689 11 GTATTAA 610 0.0 13.344262 1 GTAAGAG 6025 0.0 13.326141 3 TATACCG 280 0.0 13.214286 5 TTAGGCA 2400 0.0 13.181251 4 CTCTTAT 11760 0.0 13.072703 37 TAATACC 585 0.0 12.965812 4 TAATACT 685 0.0 12.963504 4 TTAATAC 600 0.0 12.95 3 AGTACTT 5575 0.0 12.90852 12 GTTACGG 2455 0.0 12.885947 25 CTATACT 505 0.0 12.821781 4 >>END_MODULE