##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727283.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4756038 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94805823670879 33.0 31.0 34.0 30.0 34.0 2 32.098123059571854 33.0 31.0 34.0 30.0 34.0 3 32.177064396878244 34.0 31.0 34.0 30.0 34.0 4 35.7937911766054 37.0 35.0 37.0 35.0 37.0 5 35.65104610181836 37.0 35.0 37.0 33.0 37.0 6 35.66754744179924 37.0 35.0 37.0 33.0 37.0 7 35.61035908459941 37.0 35.0 37.0 33.0 37.0 8 35.57527925554842 37.0 35.0 37.0 33.0 37.0 9 37.27544544429628 39.0 37.0 39.0 34.0 39.0 10 37.082205819213385 39.0 37.0 39.0 33.0 39.0 11 37.19820657446387 39.0 37.0 39.0 34.0 39.0 12 37.09321014676502 39.0 37.0 39.0 33.0 39.0 13 37.146468131667575 39.0 37.0 39.0 33.0 39.0 14 38.24560379879219 40.0 38.0 41.0 34.0 41.0 15 38.19971181895519 40.0 38.0 41.0 33.0 41.0 16 38.1151136723466 40.0 37.0 41.0 33.0 41.0 17 38.07166721544277 40.0 37.0 41.0 33.0 41.0 18 38.020291890014335 40.0 37.0 41.0 33.0 41.0 19 38.02423151370952 40.0 37.0 41.0 33.0 41.0 20 37.88850194216278 40.0 37.0 41.0 33.0 41.0 21 37.8002318316212 40.0 37.0 41.0 33.0 41.0 22 37.71988638442334 40.0 37.0 41.0 32.0 41.0 23 37.58718517387792 39.0 37.0 41.0 32.0 41.0 24 37.45464123709693 39.0 37.0 41.0 32.0 41.0 25 37.355465200236 39.0 37.0 41.0 31.0 41.0 26 36.94887782645976 39.0 36.0 40.0 31.0 41.0 27 36.698125834991224 39.0 36.0 40.0 30.0 41.0 28 36.507563438307265 39.0 36.0 40.0 30.0 41.0 29 36.43152598864854 39.0 36.0 40.0 30.0 41.0 30 36.32356448792041 39.0 35.0 40.0 30.0 41.0 31 36.08148231784523 38.0 35.0 40.0 29.0 41.0 32 35.961041732635444 38.0 35.0 40.0 28.0 41.0 33 35.74645787102626 38.0 35.0 40.0 27.0 41.0 34 35.56692356116583 38.0 35.0 40.0 26.0 41.0 35 35.3890622825133 38.0 34.0 40.0 26.0 41.0 36 35.21293627174552 38.0 34.0 40.0 25.0 41.0 37 34.9357570313778 38.0 34.0 40.0 24.0 41.0 38 34.809479444865666 38.0 33.0 40.0 24.0 41.0 39 34.610247857565476 38.0 33.0 40.0 23.0 41.0 40 34.454905322455375 38.0 33.0 40.0 23.0 41.0 41 34.28439196659068 38.0 33.0 40.0 22.0 41.0 42 34.05538875004783 38.0 33.0 40.0 21.0 41.0 43 30.655118609228943 34.0 27.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 18.0 11 23.0 12 11.0 13 26.0 14 63.0 15 120.0 16 209.0 17 423.0 18 847.0 19 1748.0 20 3526.0 21 6568.0 22 11201.0 23 17215.0 24 25208.0 25 34829.0 26 46408.0 27 60252.0 28 76236.0 29 94828.0 30 116394.0 31 142403.0 32 174474.0 33 215439.0 34 272852.0 35 353525.0 36 491125.0 37 759356.0 38 1225253.0 39 625451.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.78260602627649 18.175758898478104 12.683750634456665 26.35788444078874 2 19.24236097356665 21.460741062203457 33.47958952388522 25.81730844034467 3 19.271692110113502 21.967654589807733 30.33800402772223 28.422649272356526 4 15.228011214376336 15.221156769563237 32.36782380628582 37.183008209774606 5 15.068992299893313 36.99634023109151 33.29727390739939 14.637393561615783 6 37.45258132924926 34.56877342022919 13.247455129668856 14.731190120852695 7 30.838967224399806 30.499167584447388 19.469272533146288 19.192592658006514 8 29.33714995548816 34.39690767819769 17.90334728191827 18.362595084395878 9 27.69660376977644 13.32127707978784 17.12698679026534 41.85513236017038 10 16.09150305359209 27.526209841048367 32.48329807289176 23.89898903246778 11 38.32555585131994 20.781667429906996 19.846981878614088 21.045794840158973 12 22.451187311791873 24.824654470801118 28.706246670022402 24.01791154738461 13 33.14073604962786 18.80540062968378 22.851184115854416 25.202679204833938 14 23.169558359289812 19.657916946836842 24.86605447643606 32.30647021743729 15 26.858237886240605 27.309495845071048 20.858033514450472 24.974232754237878 16 25.695421272916658 25.299692727434053 23.14163595833339 25.8632500413159 17 25.417038299525778 25.56501861423311 24.19783021077628 24.82011287546483 18 25.205202313354096 24.66077857241679 25.052596299693146 25.081422814535966 19 26.54787451235671 24.898539498633106 24.57082975367312 23.98275623533706 20 25.5384418711541 24.642170647080615 24.661072935077474 25.15831454668781 21 25.21283471662758 25.23516422703099 24.680753181534715 24.87124787480672 22 26.056015532256048 24.66033702842576 23.762236550675162 25.521410888643025 23 25.461571164906587 24.550707963224852 24.257291468234694 25.730429403633863 24 25.26830105226241 24.647616356303292 24.16807855614274 25.91600403529156 25 25.580767016579763 24.131178094035413 24.329872889997937 25.958181999386888 26 25.15032470304064 24.534602120504502 24.795260256541262 25.519812919913594 27 25.95849738795191 25.00776907165166 24.376108853629848 24.657624686766592 28 25.471032821857186 25.12784801130689 24.336243739011337 25.06487542782459 29 25.19063136165018 25.1592186605742 24.533109281296746 25.117040696478877 30 25.52956893952487 25.122107939423525 24.21814123436356 25.130181886688035 31 25.189874429094132 24.361201487456576 24.524404556902194 25.924519526547098 32 24.801399820606985 24.997571508049347 24.461684284271907 25.73934438707176 33 25.29910400211268 24.473269557560307 24.464648936783096 25.762977503543915 34 25.42172707619241 24.568096386109612 24.92686139177189 25.083315145926083 35 25.188675952547058 24.68479015516697 24.722195238978326 25.404338653307647 36 24.92745011709326 24.058071024663807 25.246707448510712 25.76777140973222 37 24.477748075183587 24.066418308684664 25.454317227911133 26.001516388220615 38 24.570535391012434 23.784755294217582 25.863838766637272 25.78087054813271 39 24.198692272854004 23.6342518709901 26.338183168427165 25.828872687728737 40 24.551401818067898 23.34417849478915 26.800374597511627 25.304045089631327 41 23.934564862602024 23.153746879230148 27.20295758780733 25.708730670360495 42 23.447415685072322 23.34653339607463 27.264500409794874 25.94155050905817 43 23.509189792007547 22.51079575058063 27.174782875998886 26.80523158141293 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 281.0 1 349.5 2 418.0 3 1239.0 4 2060.0 5 2060.0 6 2489.0 7 2918.0 8 3022.5 9 3127.0 10 4350.0 11 5573.0 12 5573.0 13 12308.5 14 19044.0 15 33841.0 16 48638.0 17 35220.0 18 21802.0 19 21802.0 20 25679.0 21 29556.0 22 24680.0 23 19804.0 24 24709.5 25 29615.0 26 29615.0 27 36498.5 28 43382.0 29 51247.0 30 59112.0 31 68460.5 32 77809.0 33 77809.0 34 89703.0 35 101597.0 36 119277.5 37 136958.0 38 158718.5 39 180479.0 40 180479.0 41 204892.5 42 229306.0 43 255145.5 44 280985.0 45 311273.0 46 341561.0 47 341561.0 48 374338.5 49 407116.0 50 423941.5 51 440767.0 52 444790.5 53 448814.0 54 448814.0 55 423989.5 56 399165.0 57 374820.5 58 350476.0 59 328120.5 60 305765.0 61 305765.0 62 271150.5 63 236536.0 64 202404.5 65 168273.0 66 142400.0 67 116527.0 68 116527.0 69 97684.0 70 78841.0 71 66395.0 72 53949.0 73 46169.5 74 38390.0 75 38390.0 76 32538.5 77 26687.0 78 22953.5 79 19220.0 80 15801.0 81 12382.0 82 12382.0 83 10043.0 84 7704.0 85 6067.5 86 4431.0 87 4137.5 88 3844.0 89 3844.0 90 2899.0 91 1954.0 92 1359.5 93 765.0 94 522.0 95 279.0 96 279.0 97 181.0 98 83.0 99 64.0 100 45.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4756038.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.29805748269957 #Duplication Level Percentage of deduplicated Percentage of total 1 82.7883785676513 47.43613274068778 2 9.04234644414457 10.362177726701596 3 2.982932214585771 5.127486644949955 4 1.4219670442680972 3.2590379776391134 5 0.8326065114248958 2.3853367876046816 6 0.5354526044467359 1.8408236465310166 7 0.3935448710815923 1.5784549651678268 8 0.28526680076027505 1.3076186838294437 9 0.21021846245927253 1.0840598591324508 >10 1.3727740540061624 14.549859230012007 >50 0.09264142446690829 3.606566851794877 >100 0.037983627082381406 3.9619142503348166 >500 0.002273747672986607 0.8860599358300892 >1k 0.001466932680978352 1.3933575331504304 >5k 1.1001995107316103E-4 0.5354767832002904 >10k+ 3.6673317024387014E-5 0.6856363834337509 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32629 0.6860542325355685 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9478 0.1992835212838922 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8811 0.18525924309267502 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7194 0.15126035578353242 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.410361733863355E-5 2 2.1025904334658386E-5 0.0 0.0 0.0 8.410361733863355E-5 3 2.1025904334658386E-5 0.0 0.0 0.0 8.410361733863355E-5 4 2.1025904334658386E-5 0.0 0.0 0.0 1.0512952167329193E-4 5 2.1025904334658386E-5 0.0 0.0 0.0 1.0512952167329193E-4 6 2.1025904334658386E-5 0.0 0.0 0.0 1.471813303426087E-4 7 2.1025904334658386E-5 0.0 0.0 2.1025904334658386E-5 1.8923313901192547E-4 8 2.1025904334658386E-5 0.0 0.0 2.1025904334658386E-5 1.8923313901192547E-4 9 4.205180866931677E-5 0.0 0.0 2.1025904334658386E-5 2.5231085201590065E-4 10 6.307771300397516E-5 0.0 0.0 4.205180866931677E-5 2.5231085201590065E-4 11 1.2615542600795033E-4 0.0 0.0 6.307771300397516E-5 2.5231085201590065E-4 12 1.2615542600795033E-4 2.1025904334658386E-5 0.0 1.0512952167329193E-4 2.73336756350559E-4 13 1.2615542600795033E-4 6.307771300397516E-5 0.0 1.682072346772671E-4 2.943626606852174E-4 14 1.471813303426087E-4 6.307771300397516E-5 0.0 2.1025904334658386E-4 4.415439910278261E-4 15 1.471813303426087E-4 6.307771300397516E-5 0.0 3.364144693545342E-4 4.625698953624845E-4 16 1.471813303426087E-4 6.307771300397516E-5 0.0 6.5180303437441E-4 5.256476083664596E-4 17 1.682072346772671E-4 6.307771300397516E-5 0.0 0.0011564247384062113 5.256476083664596E-4 18 1.8923313901192547E-4 6.307771300397516E-5 0.0 0.0013877096860874536 5.887253213704348E-4 19 2.1025904334658386E-4 6.307771300397516E-5 0.0 0.0018713054857845963 5.887253213704348E-4 20 2.1025904334658386E-4 6.307771300397516E-5 0.0 0.0025861862331629814 6.097512257050931E-4 21 2.1025904334658386E-4 6.307771300397516E-5 0.0 0.003931844110581118 6.097512257050931E-4 22 2.3128494768124224E-4 6.307771300397516E-5 0.0 0.006286745396062858 6.307771300397515E-4 23 2.73336756350559E-4 6.307771300397516E-5 0.0 0.008010869551504846 7.148807473783851E-4 24 2.73336756350559E-4 6.307771300397516E-5 0.0 0.010512952167329193 7.148807473783851E-4 25 2.73336756350559E-4 6.307771300397516E-5 0.0 0.012447335366117765 7.148807473783851E-4 26 2.73336756350559E-4 6.307771300397516E-5 0.0 0.01459197760825292 7.148807473783851E-4 27 2.73336756350559E-4 6.307771300397516E-5 0.0 0.02018486816127205 7.148807473783851E-4 28 2.73336756350559E-4 6.307771300397516E-5 0.0 0.04756059560499727 7.359066517130435E-4 29 2.73336756350559E-4 6.307771300397516E-5 0.0 0.11593683650130635 7.359066517130435E-4 30 3.364144693545342E-4 6.307771300397516E-5 0.0 0.21349703261412126 7.359066517130435E-4 31 3.364144693545342E-4 6.307771300397516E-5 0.0 0.5320815350928652 7.359066517130435E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2905 0.0 18.213425 37 CGTATAC 145 2.9867806E-9 16.586206 3 GAGTACT 8345 0.0 15.784302 11 AGTACTT 8545 0.0 15.414863 12 GTACTTT 8620 0.0 15.259281 13 TCTTATA 4875 0.0 14.913846 37 TACTTTT 8935 0.0 14.804141 14 TACTTAC 685 0.0 14.313869 31 ACTTTTT 9390 0.0 14.1459 15 GTACTTA 745 0.0 13.90604 30 CGCTACG 930 0.0 13.725806 10 AACGCAG 17750 0.0 13.653522 5 TTAATAC 570 0.0 13.631579 3 CCTAGCG 190 7.1431714E-9 13.631579 2 CGACCGA 1200 0.0 13.258333 18 GTATAAT 385 0.0 12.974026 1 GCTACGG 1005 0.0 12.8855715 11 CCGATTT 1270 0.0 12.818897 21 CAATACT 520 0.0 12.807693 4 CTTTTTT 10565 0.0 12.782773 16 >>END_MODULE