SRR2727282.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727282.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2300008
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	29652	1.2892129070855405	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	10625	0.4619549149394263	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	10314	0.448433222840964	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7896	0.34330315372816095	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	3889	0.16908636839524038	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3687	0.1603037902476861	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3051	0.13265171251578253	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2696	0.11721698359310054	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	2534	0.11017352983120059	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTACG	410	0.0	18.500002	24
TCGTTAC	435	0.0	17.43678	23
TAATCGA	85	2.7250355E-5	17.411764	20
CTCGTTA	410	0.0	17.146343	22
CTATAGT	150	4.6784407E-9	16.033333	4
CTTATAC	3195	0.0	14.938966	37
AACGCAG	12210	0.0	14.666667	5
ATAAGAC	205	9.276846E-11	14.439025	3
TATACCG	90	8.2784577E-4	14.388888	5
TATACAC	1350	0.0	14.114815	37
ATGGTTG	1225	0.0	14.044897	32
AGGGCGT	635	0.0	13.984252	10
ACGGATG	810	0.0	13.932098	28
CGTGACG	80	0.0063011516	13.875	10
TAAGACT	320	0.0	13.875	4
GGCGTCA	565	0.0	13.752213	12
TATACTG	350	0.0	13.742857	5
AGTACTG	540	0.0	13.703703	5
TACGGAT	845	0.0	13.573964	27
GGACCGT	165	2.59819E-7	13.454545	6