##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727279.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2986479 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12039562307319 33.0 31.0 34.0 30.0 34.0 2 32.263493900342176 34.0 31.0 34.0 30.0 34.0 3 32.340872646350434 34.0 31.0 34.0 30.0 34.0 4 35.92810630846559 37.0 35.0 37.0 35.0 37.0 5 35.79601564250075 37.0 35.0 37.0 35.0 37.0 6 35.80655380466429 37.0 35.0 37.0 35.0 37.0 7 35.747059999417374 37.0 35.0 37.0 35.0 37.0 8 35.70604949842272 37.0 35.0 37.0 33.0 37.0 9 37.449023750041434 39.0 37.0 39.0 35.0 39.0 10 37.27261902728932 39.0 37.0 39.0 34.0 39.0 11 37.382573927357264 39.0 37.0 39.0 34.0 39.0 12 37.27063843408911 39.0 37.0 39.0 34.0 39.0 13 37.32685044830384 39.0 37.0 39.0 34.0 39.0 14 38.49531605613165 40.0 38.0 41.0 34.0 41.0 15 38.447896335450544 40.0 38.0 41.0 34.0 41.0 16 38.36167439985347 40.0 38.0 41.0 34.0 41.0 17 38.29971749340946 40.0 38.0 41.0 34.0 41.0 18 38.22752646176317 40.0 38.0 41.0 33.0 41.0 19 38.21795264590844 40.0 38.0 41.0 34.0 41.0 20 38.08113500881807 40.0 38.0 41.0 33.0 41.0 21 37.98563693232064 40.0 37.0 41.0 33.0 41.0 22 37.90212789040204 40.0 37.0 41.0 33.0 41.0 23 37.76926641707509 40.0 37.0 41.0 32.0 41.0 24 37.63325508064848 40.0 37.0 41.0 32.0 41.0 25 37.52773885234083 39.0 37.0 41.0 32.0 41.0 26 37.118480993839235 39.0 36.0 41.0 31.0 41.0 27 36.87743560225938 39.0 36.0 40.0 30.0 41.0 28 36.68995763907933 39.0 36.0 40.0 30.0 41.0 29 36.64039392207345 39.0 36.0 40.0 30.0 41.0 30 36.55325351358573 39.0 36.0 40.0 30.0 41.0 31 36.32918128672594 39.0 35.0 40.0 29.0 41.0 32 36.20025119881975 39.0 35.0 40.0 29.0 41.0 33 35.99677010955041 39.0 35.0 40.0 27.0 41.0 34 35.83698897598141 38.0 35.0 40.0 27.0 41.0 35 35.66464020004828 38.0 35.0 40.0 26.0 41.0 36 35.492513424671664 38.0 35.0 40.0 26.0 41.0 37 35.23560520599676 38.0 34.0 40.0 25.0 41.0 38 35.10328182451643 38.0 34.0 40.0 24.0 41.0 39 34.92268788764294 38.0 34.0 40.0 24.0 41.0 40 34.78047928681233 38.0 33.0 40.0 24.0 41.0 41 34.625603595404485 38.0 33.0 40.0 23.0 41.0 42 34.42945455166435 38.0 33.0 40.0 23.0 41.0 43 30.78823457322151 35.0 27.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 10.0 11 14.0 12 9.0 13 16.0 14 27.0 15 51.0 16 108.0 17 264.0 18 513.0 19 1047.0 20 2124.0 21 3875.0 22 6425.0 23 10231.0 24 14916.0 25 20571.0 26 27509.0 27 35403.0 28 44495.0 29 54885.0 30 68098.0 31 83418.0 32 102063.0 33 125819.0 34 159508.0 35 208187.0 36 287107.0 37 436333.0 38 776642.0 39 516810.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93407755420346 16.294405552491746 11.379018570028451 28.39249832327634 2 20.542987243506484 19.188415522091397 32.10673840331708 28.161858831085034 3 19.865466993071106 19.82776373113623 28.84892209186805 31.457847183924613 4 16.288244451074323 14.369831497224657 30.53984307272879 38.80208097897223 5 16.09299780778636 34.931636887451745 32.84858189192022 16.12678341284168 6 39.727217234743655 31.9728683844755 12.92495276209878 15.374961618682068 7 32.62771979980438 28.72020864703887 18.392863301566827 20.259208251589918 8 29.915562774759174 32.54819471357408 17.59449840430822 19.94174410735853 9 28.059229614539394 12.445491831685406 16.23587508902624 43.25940346474896 10 16.849607849243206 25.74235412336735 32.03300609178903 25.37503193560042 11 39.909505474506936 19.05504776695232 19.136113128536984 21.899333630003763 12 23.488429016242872 22.98834178977987 27.524452708356563 25.998776485620695 13 33.983530438352325 17.706536694214154 21.464038421164187 26.845894446269337 14 24.276045470267828 18.186834730798378 22.77933312104321 34.757786677890586 15 28.17642447845774 25.337060799690875 19.488133015500864 26.99838170635052 16 27.59855334659979 23.747597086736587 21.644016247895934 27.009833318767683 17 26.911657507050947 23.75164868060348 22.56677512214216 26.769918690203415 18 26.863272770376085 23.33774990549071 23.076673232927472 26.72230409120573 19 28.082769040063564 23.217374038123154 22.720032519900524 25.979824401912754 20 27.503859896553767 22.80709156166844 22.72813570763431 26.960912834143485 21 27.232470075965708 23.14789422594299 22.682195320978316 26.93744037711298 22 27.95234789864586 22.652327372802556 22.05001274075592 27.34531198779566 23 27.297396030576476 22.680755498364462 22.43337388275625 27.588474588302812 24 27.159407449374328 22.600426790210143 22.40554847363735 27.834617286778172 25 27.586532501986454 22.177554236945916 22.449680710964316 27.786232550103318 26 27.180301619398627 22.589075630533483 22.75860637225308 27.47201637781481 27 27.78214747198959 22.74792489751309 22.430494237528542 27.039433392968775 28 27.302686541576215 23.033478554511852 22.41241274423828 27.25142215967365 29 27.179799355696122 23.104029862590696 22.654336427612584 27.0618343541006 30 27.49126981974425 22.916551564568174 22.421721364858083 27.17045725082949 31 27.362020626965734 22.380200898784153 22.593261161387705 27.6645173128624 32 27.00514552421095 22.795506012263942 22.639770780239875 27.559577683285237 33 27.131113260799754 22.41703357030135 22.654972628302424 27.79688054059647 34 27.358538265295017 22.400927647574285 22.984658522628152 27.255875564502546 35 27.11989603811043 22.505699855917285 23.05099081560594 27.32341329036635 36 26.849242870952715 22.03106065704798 23.434519378840434 27.68517709315887 37 26.660559140044178 21.916209690408003 23.67024847655048 27.752982692997342 38 26.484398517451485 21.82225289379232 23.96136051852365 27.73198807023254 39 26.122701683152638 21.69625167295668 24.54033663052712 27.640710013363563 40 26.568142618782854 21.364188397105753 24.809449522330475 27.258219461780914 41 25.963350152470515 21.466717160910893 25.029407539781793 27.540525146836792 42 25.582399876242224 21.367536821789137 25.261821697055293 27.788241604913345 43 25.830786019255452 20.472770777895978 25.07089452160889 28.62554868123968 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 56.5 2 77.0 3 201.0 4 325.0 5 325.0 6 361.5 7 398.0 8 397.5 9 397.0 10 549.5 11 702.0 12 702.0 13 1497.5 14 2293.0 15 3931.5 16 5570.0 17 4078.0 18 2586.0 19 2586.0 20 3166.0 21 3746.0 22 3317.0 23 2888.0 24 3810.5 25 4733.0 26 4733.0 27 6422.0 28 8111.0 29 10233.0 30 12355.0 31 16151.5 32 19948.0 33 19948.0 34 25536.0 35 31124.0 36 39702.0 37 48280.0 38 61761.0 39 75242.0 40 75242.0 41 91405.5 42 107569.0 43 128160.5 44 148752.0 45 173086.5 46 197421.0 47 197421.0 48 224879.5 49 252338.0 50 272723.0 51 293108.0 52 302750.0 53 312392.0 54 312392.0 55 304347.0 56 296302.0 57 284227.0 58 272152.0 59 256248.0 60 240344.0 61 240344.0 62 216141.0 63 191938.0 64 166638.5 65 141339.0 66 120749.5 67 100160.0 68 100160.0 69 84420.0 70 68680.0 71 58713.5 72 48747.0 73 41212.0 74 33677.0 75 33677.0 76 28415.5 77 23154.0 78 19438.5 79 15723.0 80 12704.0 81 9685.0 82 9685.0 83 7833.0 84 5981.0 85 4848.5 86 3716.0 87 3043.5 88 2371.0 89 2371.0 90 1770.0 91 1169.0 92 866.0 93 563.0 94 402.0 95 241.0 96 241.0 97 170.0 98 99.0 99 73.0 100 47.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2986479.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.766048721362566 #Duplication Level Percentage of deduplicated Percentage of total 1 83.08449358633389 51.31800878843234 2 8.906040923630297 11.001819152067956 3 2.9782851256492564 5.5187071253088416 4 1.426867122482224 3.5252777682458976 5 0.8175701773477798 2.5249039703597997 6 0.5443610056806517 2.017381703932863 7 0.37697196428795055 1.629884809895811 8 0.28093050985460766 1.3881574047197536 9 0.21502910536462805 1.195334837861636 >10 1.279295960890809 14.24046893285713 >50 0.06848623597437171 2.861406373488479 >100 0.020690291010434736 2.1449160440460338 >500 5.976614681164583E-4 0.24115685119215058 >1k 3.803300248389976E-4 0.39257623759117305 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3906 0.13078946813287487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.348424683381333E-5 2 0.0 0.0 0.0 0.0 3.348424683381333E-5 3 0.0 0.0 0.0 0.0 3.348424683381333E-5 4 0.0 0.0 0.0 0.0 3.348424683381333E-5 5 0.0 0.0 0.0 0.0 3.348424683381333E-5 6 0.0 0.0 0.0 0.0 6.696849366762666E-5 7 3.348424683381333E-5 0.0 0.0 0.0 1.0045274050143999E-4 8 1.0045274050143999E-4 0.0 0.0 0.0 1.3393698733525332E-4 9 1.0045274050143999E-4 0.0 0.0 0.0 3.348424683381333E-4 10 1.0045274050143999E-4 0.0 0.0 0.0 3.683267151719466E-4 11 1.0045274050143999E-4 0.0 0.0 0.0 3.683267151719466E-4 12 1.0045274050143999E-4 0.0 0.0 0.0 4.352952088395733E-4 13 1.0045274050143999E-4 0.0 0.0 0.0 5.357479493410133E-4 14 1.0045274050143999E-4 0.0 0.0 0.0 6.362006898424533E-4 15 1.0045274050143999E-4 0.0 0.0 0.0 7.701376771777065E-4 16 1.3393698733525332E-4 0.0 0.0 0.0 9.710431581805866E-4 17 1.3393698733525332E-4 0.0 0.0 2.343897278366933E-4 9.710431581805866E-4 18 1.3393698733525332E-4 0.0 0.0 2.6787397467050665E-4 9.710431581805866E-4 19 1.3393698733525332E-4 0.0 0.0 4.352952088395733E-4 9.710431581805866E-4 20 1.6742123416906666E-4 0.0 0.0 5.357479493410133E-4 0.0010045274050144 21 1.6742123416906666E-4 0.0 0.0 9.040746645129599E-4 0.0011049801455158398 22 1.6742123416906666E-4 0.0 0.0 0.00140633836702016 0.0011049801455158398 23 1.6742123416906666E-4 0.0 0.0 0.0017076965885244799 0.0012724013796849066 24 1.6742123416906666E-4 0.0 0.0 0.0022434445378654933 0.0013058856265187198 25 1.6742123416906666E-4 0.0 0.0 0.0023773815252007466 0.0013728541201863465 26 1.6742123416906666E-4 0.0 0.0 0.00311403495554464 0.00140633836702016 27 1.6742123416906666E-4 0.0 0.0 0.006395491145258346 0.0014733068606877864 28 1.6742123416906666E-4 0.0 0.0 0.02625164951770965 0.0014733068606877864 29 1.6742123416906666E-4 0.0 0.0 0.07269429987620873 0.0014733068606877864 30 1.6742123416906666E-4 0.0 0.0 0.1401650572463426 0.0014733068606877864 31 1.6742123416906666E-4 0.0 0.0 0.3156894791491921 0.0014733068606877864 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1230 0.0 16.845528 37 TAAACGT 80 3.3848308E-4 16.1875 4 TCTTATA 2035 0.0 14.727273 37 TCTATAG 205 9.276846E-11 14.439025 3 CTCTATA 170 2.4410838E-8 14.147059 2 TCGTTAC 400 0.0 13.875001 23 CTCTTAT 3370 0.0 13.778931 37 TATAGAT 165 2.5990812E-7 13.454545 2 TATACTG 235 5.638867E-11 13.382979 5 ATCTATA 155 1.8901974E-6 13.129032 2 TTACACA 485 0.0 12.969072 4 TCTATAC 200 1.465196E-8 12.950001 3 CCCCTAT 335 0.0 12.701492 1 CTCGTTA 440 0.0 12.613636 22 TAGAACA 315 0.0 12.333333 4 GTATAGA 255 2.237357E-10 12.333333 1 TAGTACG 165 3.8087037E-6 12.333333 2 TATACCG 150 1.9458825E-5 12.333332 5 TACTTAC 290 1.2732926E-11 12.120689 31 TAATACC 230 7.921699E-9 12.065218 4 >>END_MODULE