##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727278.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2743254 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.120125223548385 33.0 31.0 34.0 30.0 34.0 2 32.2597130998442 33.0 31.0 34.0 30.0 34.0 3 32.33782106943068 34.0 31.0 34.0 30.0 34.0 4 35.909855594851955 37.0 35.0 37.0 35.0 37.0 5 35.795693362699915 37.0 35.0 37.0 35.0 37.0 6 35.82415700478337 37.0 35.0 37.0 35.0 37.0 7 35.76040716608816 37.0 35.0 37.0 35.0 37.0 8 35.73975359190217 37.0 35.0 37.0 35.0 37.0 9 37.45891922512462 39.0 37.0 39.0 35.0 39.0 10 37.304819750559005 39.0 37.0 39.0 34.0 39.0 11 37.41177776465468 39.0 37.0 39.0 35.0 39.0 12 37.32117623814638 39.0 37.0 39.0 34.0 39.0 13 37.375532488059804 39.0 37.0 39.0 34.0 39.0 14 38.51934782561148 40.0 38.0 41.0 34.0 41.0 15 38.48643654579561 40.0 38.0 41.0 34.0 41.0 16 38.415066195109894 40.0 38.0 41.0 34.0 41.0 17 38.39597973793167 40.0 38.0 41.0 34.0 41.0 18 38.366469528523425 40.0 38.0 41.0 34.0 41.0 19 38.376454385922706 40.0 38.0 41.0 34.0 41.0 20 38.26943184991255 40.0 38.0 41.0 34.0 41.0 21 38.19577552789497 40.0 38.0 41.0 34.0 41.0 22 38.11787351809202 40.0 38.0 41.0 33.0 41.0 23 38.00826245036005 40.0 37.0 41.0 33.0 41.0 24 37.896127737351335 40.0 37.0 41.0 33.0 41.0 25 37.81232652900533 40.0 37.0 41.0 33.0 41.0 26 37.44466316279863 39.0 37.0 41.0 32.0 41.0 27 37.218483596487964 39.0 36.0 41.0 31.0 41.0 28 37.07409959121539 39.0 36.0 40.0 31.0 41.0 29 37.00909358010596 39.0 36.0 40.0 31.0 41.0 30 36.91256077636267 39.0 36.0 40.0 31.0 41.0 31 36.692907401210384 39.0 36.0 40.0 30.0 41.0 32 36.56548062993802 39.0 35.0 40.0 30.0 41.0 33 36.379302098894236 39.0 35.0 40.0 30.0 41.0 34 36.23040885021948 39.0 35.0 40.0 30.0 41.0 35 36.06681444736798 38.0 35.0 40.0 29.0 41.0 36 35.903900258598 38.0 35.0 40.0 28.0 41.0 37 35.644612201422106 38.0 35.0 40.0 27.0 41.0 38 35.51969157795815 38.0 35.0 40.0 26.0 41.0 39 35.340672792238706 38.0 34.0 40.0 25.0 41.0 40 35.168324916322 38.0 34.0 40.0 25.0 41.0 41 35.01254131042915 38.0 34.0 40.0 24.0 41.0 42 34.77490782844024 38.0 33.0 40.0 24.0 41.0 43 31.465013083002887 35.0 28.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 13.0 11 23.0 12 12.0 13 17.0 14 29.0 15 40.0 16 80.0 17 170.0 18 272.0 19 612.0 20 1276.0 21 2436.0 22 4216.0 23 6972.0 24 10432.0 25 14960.0 26 20690.0 27 27130.0 28 35825.0 29 45479.0 30 56396.0 31 70381.0 32 88276.0 33 110847.0 34 143022.0 35 187636.0 36 265231.0 37 422794.0 38 723835.0 39 504149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.03739281889318 18.46741132975656 13.003936201314206 25.491259650036053 2 19.039614997371736 22.08621585897624 33.35021109966485 25.52395804398718 3 19.51463480960932 22.29082687931923 30.368897666785504 27.825640644285947 4 15.255641657680988 15.495612145284396 32.14175573971641 37.106990457318204 5 15.320455196638735 36.87474801822945 32.93373490023162 14.871061884900193 6 36.99949038623474 34.17871622532948 13.61354070749555 15.208252680940227 7 30.253013392124828 30.191881612129244 19.834000059783016 19.72110493596291 8 29.001616328637454 33.99010809790125 18.372888547688255 18.635387025773042 9 26.716847947729228 13.702486171532058 18.174948437148 41.40571744359071 10 16.113382136688763 27.96675043579632 32.77370597108398 23.14616145643094 11 37.222911185037916 21.233432995996726 20.237353157964957 21.306302661000405 12 21.900378164034393 25.4688774717908 29.249351317814536 23.381393046360273 13 32.733498246972395 19.15980073299811 23.219395652024932 24.88730536800457 14 22.887089565895103 20.2807687512713 25.67173874530029 31.16040293753331 15 26.229470548480016 27.821412089438308 21.527572729320728 24.42154463276095 16 24.98427050502797 25.445984950719108 23.91973182213532 25.650012722117605 17 24.569325334074062 26.079575569743085 25.400199908575726 23.950899187607128 18 24.363292644428842 24.726656736853386 26.153830450989958 24.756220167727815 19 25.265651667690996 25.31088991394891 25.904564433333555 23.518893985026544 20 24.948254882704994 25.246440905581473 25.725871537961854 24.079432673751683 21 24.61292319267556 25.512037893683924 25.495160127352406 24.37987878628811 22 24.99393056567128 25.14845508290519 25.182137709450163 24.675476641973365 23 24.640773329775513 24.982593664312528 25.184871688877514 25.191761317034437 24 24.605887752282506 25.067456385737525 25.314535219852047 25.01212064212793 25 24.850888762032245 24.92725792070293 25.363819755662437 24.85803356160239 26 24.563055407920668 25.15727672319078 25.74869115291548 24.530976715973075 27 24.868131058954074 25.489765074615768 25.605722255394507 24.036381611035655 28 24.714955304904322 25.47711586313189 25.589974533892963 24.217954298070833 29 24.269681188836323 25.715846946728227 25.817368716130552 24.197103148304898 30 24.304384501034175 25.769323584327225 25.739760153452796 24.186531761185805 31 24.319548973591218 25.142622593460175 25.60473802280066 24.933090410147948 32 24.054717499728426 25.574008094037225 25.60174887196009 24.76952553427426 33 24.47330797658547 25.25657485599219 25.38835266439054 24.8817645030318 34 24.42005005734066 25.21319571574488 25.74548328372072 24.62127094319374 35 24.329792283179028 25.34165629577137 25.75656501366625 24.57198640738335 36 24.12773297696823 24.962836106317535 26.047423971677432 24.862006945036807 37 23.832681917168443 24.656375239040933 26.36190451194093 25.149038331849695 38 23.53599046971225 24.79507912865524 26.805210162821236 24.86372023881128 39 23.408040232512192 24.525326491823215 27.207579028409327 24.859054247255266 40 23.582723291390444 24.515192541412496 27.500333545490136 24.40175062170692 41 23.2788870443641 24.35111732271237 27.63382464766296 24.736170985260568 42 22.98507538857138 24.557915526597245 27.542363922553285 24.91464516227808 43 23.228873447373083 23.837019831193174 27.51064976119601 25.423456960237733 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 548.0 1 556.5 2 565.0 3 1429.5 4 2294.0 5 2294.0 6 2587.5 7 2881.0 8 2930.0 9 2979.0 10 4466.0 11 5953.0 12 5953.0 13 12442.5 14 18932.0 15 30488.0 16 42044.0 17 30068.0 18 18092.0 19 18092.0 20 21216.5 21 24341.0 22 19282.5 23 14224.0 24 17480.5 25 20737.0 26 20737.0 27 25499.5 28 30262.0 29 35095.0 30 39928.0 31 45258.0 32 50588.0 33 50588.0 34 57230.5 35 63873.0 36 74181.5 37 84490.0 38 97550.0 39 110610.0 40 110610.0 41 125073.0 42 139536.0 43 153244.0 44 166952.0 45 182506.0 46 198060.0 47 198060.0 48 213994.0 49 229928.0 50 238015.5 51 246103.0 52 248550.5 53 250998.0 54 250998.0 55 237037.5 56 223077.0 57 208370.5 58 193664.0 59 179449.0 60 165234.0 61 165234.0 62 145925.0 63 126616.0 64 107981.0 65 89346.0 66 75082.0 67 60818.0 68 60818.0 69 50690.5 70 40563.0 71 34189.0 72 27815.0 73 23009.0 74 18203.0 75 18203.0 76 15229.0 77 12255.0 78 10234.5 79 8214.0 80 6655.0 81 5096.0 82 5096.0 83 4071.5 84 3047.0 85 2503.5 86 1960.0 87 1626.0 88 1292.0 89 1292.0 90 975.0 91 658.0 92 468.0 93 278.0 94 212.0 95 146.0 96 146.0 97 90.5 98 35.0 99 27.0 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2743254.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.96183958172594 #Duplication Level Percentage of deduplicated Percentage of total 1 83.63615607045017 50.986139295989766 2 8.64040145035634 10.534695342766707 3 2.8307780831690983 5.177083181928606 4 1.3293675293330696 3.241627602734318 5 0.8037042702596694 2.4497645397359036 6 0.5300068224484433 1.9386114532393386 7 0.3817025460015365 1.6288502564097422 8 0.2701465630919815 1.3174905154214382 9 0.22131152930812112 1.2142402152541307 >10 1.2796267284616687 13.967266226632777 >50 0.05513300660798734 2.2571705702047917 >100 0.01951240488375463 2.0996041492115882 >500 0.0011363032482107917 0.4551842826915774 >1k 7.774706434627201E-4 0.8491912144100392 >5k 1.794163023375508E-4 0.8826965692976757 >10k+ 5.980543411251694E-5 1.0003845840716583 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27439 1.0002354867613426 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9573 0.3489651341071589 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8607 0.3137514790828702 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6031 0.21984839901810038 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3285 0.1197482989180003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.645305903135473E-5 2 3.645305903135473E-5 0.0 0.0 0.0 3.645305903135473E-5 3 3.645305903135473E-5 0.0 0.0 0.0 3.645305903135473E-5 4 3.645305903135473E-5 0.0 0.0 0.0 3.645305903135473E-5 5 3.645305903135473E-5 0.0 0.0 0.0 3.645305903135473E-5 6 3.645305903135473E-5 0.0 0.0 0.0 1.093591770940642E-4 7 3.645305903135473E-5 0.0 0.0 0.0 1.4581223612541893E-4 8 3.645305903135473E-5 0.0 0.0 0.0 1.4581223612541893E-4 9 3.645305903135473E-5 0.0 0.0 0.0 1.8226529515677367E-4 10 3.645305903135473E-5 0.0 0.0 0.0 1.8226529515677367E-4 11 3.645305903135473E-5 0.0 0.0 0.0 1.8226529515677367E-4 12 3.645305903135473E-5 0.0 0.0 0.0 1.8226529515677367E-4 13 3.645305903135473E-5 0.0 0.0 0.0 1.8226529515677367E-4 14 3.645305903135473E-5 0.0 0.0 1.093591770940642E-4 2.5517141321948315E-4 15 3.645305903135473E-5 0.0 0.0 2.5517141321948315E-4 2.5517141321948315E-4 16 3.645305903135473E-5 0.0 0.0 3.6453059031354735E-4 2.9162447225083787E-4 17 3.645305903135473E-5 0.0 0.0 5.46795885470321E-4 2.9162447225083787E-4 18 3.645305903135473E-5 0.0 0.0 6.926081215957399E-4 2.9162447225083787E-4 19 7.290611806270947E-5 0.0 0.0 0.001093591770940642 2.9162447225083787E-4 20 7.290611806270947E-5 0.0 0.0 0.0018226529515677366 2.9162447225083787E-4 21 7.290611806270947E-5 0.0 0.0 0.003025603899602443 2.9162447225083787E-4 22 7.290611806270947E-5 0.0 0.0 0.005103428264389663 3.2807753128219263E-4 23 7.290611806270947E-5 0.0 0.0 0.006051207799204886 4.7388976740761154E-4 24 7.290611806270947E-5 0.0 0.0 0.008274844400117524 4.7388976740761154E-4 25 1.093591770940642E-4 0.0 0.0 0.009842325938465778 4.7388976740761154E-4 26 1.093591770940642E-4 0.0 0.0 0.011482713594876742 4.7388976740761154E-4 27 1.093591770940642E-4 0.0 0.0 0.016586141859266403 4.7388976740761154E-4 28 1.093591770940642E-4 0.0 0.0 0.04228554847637149 4.7388976740761154E-4 29 1.093591770940642E-4 0.0 0.0 0.10225083058295004 4.7388976740761154E-4 30 1.093591770940642E-4 0.0 0.0 0.1915972782688005 4.7388976740761154E-4 31 1.093591770940642E-4 0.0 0.0 0.434374651417623 4.7388976740761154E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1320 0.0 16.537878 37 TAGTACT 260 0.0 16.365385 4 TATACCG 105 9.352469E-6 15.857142 5 TAGATCG 95 7.065381E-5 15.578948 5 TTAGTAC 120 1.937784E-6 15.416667 3 TTAATAC 265 0.0 15.358491 3 GAGTACT 7460 0.0 14.234584 11 AGTACTT 7560 0.0 14.14418 12 TAATACT 275 0.0 14.127274 4 CGCAATC 105 1.656952E-4 14.095238 22 TCTTATA 2190 0.0 14.022831 37 AACGCAG 11335 0.0 13.758713 5 GTCTTAG 455 0.0 13.417582 1 CTCTTAT 3575 0.0 13.402797 37 GTACTTT 7890 0.0 13.36502 13 CGAACGT 125 4.849169E-5 13.32 4 GTACTAA 170 3.736568E-7 13.058824 1 TACTTTT 8065 0.0 13.006199 14 GTAATAC 215 2.904926E-9 12.906977 3 CTAGTAC 175 5.3123404E-7 12.685715 3 >>END_MODULE