##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727275.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8873752 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.343645619124807 31.0 31.0 34.0 30.0 34.0 2 31.575754427214104 31.0 31.0 34.0 30.0 34.0 3 31.72590286498879 31.0 31.0 34.0 30.0 34.0 4 35.52545788974044 37.0 35.0 37.0 33.0 37.0 5 35.37154993738838 37.0 35.0 37.0 33.0 37.0 6 35.38231032375032 37.0 35.0 37.0 33.0 37.0 7 35.2959891148637 37.0 35.0 37.0 32.0 37.0 8 35.301812919720994 37.0 35.0 37.0 32.0 37.0 9 36.8881265782501 39.0 37.0 39.0 33.0 39.0 10 36.62765299278141 39.0 35.0 39.0 32.0 39.0 11 36.78149332999164 39.0 37.0 39.0 32.0 39.0 12 36.63724949716873 39.0 35.0 39.0 32.0 39.0 13 36.69728610851419 39.0 35.0 39.0 32.0 39.0 14 37.73334526364947 39.0 37.0 41.0 32.0 41.0 15 37.72973461507601 39.0 37.0 41.0 32.0 41.0 16 37.67334133295589 39.0 37.0 41.0 32.0 41.0 17 37.66875094097739 39.0 37.0 41.0 32.0 41.0 18 37.60539420078452 39.0 36.0 41.0 32.0 41.0 19 37.615190620607834 39.0 37.0 41.0 32.0 41.0 20 37.54910189060952 39.0 36.0 41.0 32.0 41.0 21 37.446935862079535 39.0 36.0 41.0 32.0 41.0 22 37.36958594290217 39.0 36.0 41.0 31.0 41.0 23 37.253772361454324 39.0 36.0 41.0 31.0 41.0 24 37.111654799457995 39.0 36.0 40.0 31.0 41.0 25 36.992630287616784 39.0 36.0 40.0 31.0 41.0 26 36.78076511491419 39.0 36.0 40.0 30.0 41.0 27 36.62545741643444 39.0 35.0 40.0 30.0 41.0 28 36.3887303814666 38.0 35.0 40.0 30.0 41.0 29 36.323920253800196 38.0 35.0 40.0 30.0 41.0 30 36.22453354567493 38.0 35.0 40.0 30.0 41.0 31 36.37364364025499 38.0 35.0 40.0 30.0 41.0 32 36.33732720950507 38.0 35.0 40.0 30.0 41.0 33 36.31396753030736 38.0 35.0 40.0 30.0 41.0 34 36.35482116245755 38.0 35.0 40.0 30.0 41.0 35 36.138810618101566 38.0 35.0 40.0 29.0 41.0 36 36.10090117461024 38.0 35.0 40.0 29.0 41.0 37 36.023006615465476 38.0 35.0 40.0 29.0 41.0 38 35.917332037226195 38.0 35.0 40.0 28.0 41.0 39 35.83800831936705 38.0 35.0 40.0 28.0 41.0 40 35.63605394876936 38.0 34.0 40.0 27.0 41.0 41 35.557698930508764 38.0 34.0 40.0 27.0 41.0 42 35.34250821974741 38.0 34.0 40.0 26.0 41.0 43 34.97274816785504 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 4.0 14 26.0 15 62.0 16 210.0 17 370.0 18 630.0 19 1282.0 20 2741.0 21 5331.0 22 9894.0 23 17260.0 24 28305.0 25 44065.0 26 66224.0 27 94854.0 28 133019.0 29 180226.0 30 234653.0 31 299278.0 32 375398.0 33 467683.0 34 588447.0 35 734193.0 36 927558.0 37 1217300.0 38 1644661.0 39 1800074.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.08665601653055 18.80408647886486 12.581397361567012 25.52786014303758 2 18.17377812677208 22.37749037836532 33.83195744032513 25.616774054537473 3 20.008086770962272 24.084524787260225 30.300024161144012 25.607364280633494 4 14.22088424377873 15.657176355615979 34.54646918237066 35.575470218234635 5 14.019729196849315 38.06098029334153 33.35110109004624 14.568189419762914 6 34.12076424944037 35.337994570954876 15.774387203969638 14.766853975635108 7 28.33226576537185 32.06527520715026 20.982928078224408 18.619530949253484 8 28.692913662676172 32.67297756349287 19.963629815212325 18.67047895861863 9 28.199852779297867 13.023284851774086 18.96346663733672 39.81339573159133 10 17.30294017682712 26.47949818746343 31.77218610571943 24.44537552999002 11 37.05753778108741 21.764040734967576 20.469120615496127 20.70930086844888 12 21.948111689395873 25.748488350812597 28.770209038972467 23.533190920819063 13 30.706098164564438 18.736223414853153 25.003268065188212 25.554410355394204 14 23.211072385164698 20.571050441797336 24.948635030593596 31.26924214244437 15 26.233401609600985 27.129674122062458 22.27574085910898 24.361183409227575 16 24.726384059414777 25.516951566823142 25.04090716080413 24.715757212957946 17 24.0852685538203 25.68914479467084 25.321442384236114 24.904144267272738 18 24.30183985308582 23.76351063225567 27.281515192220834 24.65313432243768 19 24.52231029219658 25.08971402401149 27.20365635640933 23.1843193273826 20 24.265136100265142 23.55856913738405 26.92631031383343 25.24998444851738 21 25.396112039191536 24.64646296177761 26.92032637378191 23.037098625248937 22 25.525268229267624 23.930621455276192 26.005516043270084 24.538594272186106 23 23.65976646631549 24.188911297047746 26.894903080455705 25.25641915618106 24 23.557554910256677 25.173725837729066 26.849195244581995 24.419524007432255 25 24.550945304759473 23.719019868934808 26.110984395326803 25.619050430978913 26 23.802400607995356 25.17832366737317 27.049245910861607 23.97002981376987 27 25.57303832696699 24.310393168526684 25.92220291935136 24.194365585154962 28 23.55223585243311 25.27252282912572 26.9792078931212 24.19603342531998 29 23.674517836423643 25.14868569687321 27.32672718372116 23.85006928298199 30 23.927263236565548 25.64371868855474 27.161960352283902 23.26705772259581 31 24.291844081286023 25.255483813385815 26.078844664579314 24.37382744074885 32 23.588669144686484 25.198022212024856 26.077244439556118 25.136064203732538 33 23.068066360204792 24.70935631286518 26.91959387641214 25.302983450517885 34 24.405595288216304 24.91552614947995 27.26445363810032 23.414424924203423 35 24.3174589508474 24.657709613701172 27.63128832088163 23.393543114569802 36 23.046756321339608 25.5103478213049 27.150409432222133 24.292486425133358 37 23.69031724123009 25.1110916780185 27.421039037376747 23.777552043374666 38 23.476811161727305 24.302966772116235 27.50581715603501 24.714404910121445 39 23.645894093051055 24.139045129951793 27.48026990161546 24.734790875381687 40 23.85147793177001 24.197182882731003 28.132598251562584 23.8187409339364 41 22.41874688406888 24.85284691300816 28.586014123450827 24.142392079472135 42 23.51937489350615 24.680732569492587 28.373623693788154 23.42626884321311 43 22.654351845758143 23.403719193414467 28.321244497254373 25.620684463573017 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1176.0 1 1283.5 2 1391.0 3 3669.5 4 5948.0 5 5948.0 6 9588.0 7 13228.0 8 12294.5 9 11361.0 10 14690.5 11 18020.0 12 18020.0 13 33238.0 14 48456.0 15 84396.0 16 120336.0 17 106695.0 18 93054.0 19 93054.0 20 96822.0 21 100590.0 22 79388.0 23 58186.0 24 68573.0 25 78960.0 26 78960.0 27 92860.5 28 106761.0 29 120788.0 30 134815.0 31 152081.0 32 169347.0 33 169347.0 34 194188.0 35 219029.0 36 259067.0 37 299105.0 38 341223.0 39 383341.0 40 383341.0 41 429144.5 42 474948.0 43 499978.5 44 525009.0 45 584642.0 46 644275.0 47 644275.0 48 734459.0 49 824643.0 50 824585.0 51 824527.0 52 778991.5 53 733456.0 54 733456.0 55 705310.0 56 677164.0 57 649644.0 58 622124.0 59 578453.5 60 534783.0 61 534783.0 62 450195.5 63 365608.0 64 326760.5 65 287913.0 66 241942.0 67 195971.0 68 195971.0 69 159532.5 70 123094.0 71 102451.5 72 81809.0 73 59054.0 74 36299.0 75 36299.0 76 28248.5 77 20198.0 78 17929.0 79 15660.0 80 12472.0 81 9284.0 82 9284.0 83 7684.5 84 6085.0 85 5471.0 86 4857.0 87 3194.0 88 1531.0 89 1531.0 90 1117.0 91 703.0 92 517.0 93 331.0 94 335.5 95 340.0 96 340.0 97 180.5 98 21.0 99 18.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8873752.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.866672939274636 #Duplication Level Percentage of deduplicated Percentage of total 1 77.11562565506436 28.42996549532794 2 11.062687310126647 8.15688949783806 3 3.9136132223985425 4.328456960429632 4 2.010834778762762 2.9653115249426163 5 1.2200080992500397 2.248881978915866 6 0.8081050311199961 1.7875286329729945 7 0.5613475676487447 1.448651202723453 8 0.45721066842892877 1.3484668941853164 9 0.33430739950505556 1.1092321402859076 >10 2.1682539559706795 15.396612633832868 >50 0.1997337153809888 5.0664918660461815 >100 0.1204002883377271 8.547244733660348 >500 0.012911591866829423 3.3640697427359587 >1k 0.01355336861729244 10.08237868340908 >5k 0.0011319969195712043 2.9872452912661718 >10k+ 2.753506020578605E-4 2.732572721427477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 68718 0.7743962193218833 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 48318 0.5445047371168362 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 46601 0.5251555373645782 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20352 0.22935056107044688 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 14789 0.16666005540835488 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 12525 0.14114660855971634 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 10621 0.11969007022057862 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 10226 0.11523874005043189 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 10117 0.11401039830727747 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 9972 0.11237636571317296 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 9536 0.10746299874055529 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 9395 0.10587404290766747 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 9126 0.10284263071584601 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC 8987 0.10127621326356652 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.380757091250691E-5 2 0.0 0.0 0.0 0.0 3.380757091250691E-5 3 0.0 0.0 0.0 0.0 3.380757091250691E-5 4 0.0 0.0 0.0 1.1269190304168969E-5 3.380757091250691E-5 5 0.0 1.1269190304168969E-5 0.0 2.2538380608337937E-5 3.380757091250691E-5 6 0.0 1.1269190304168969E-5 0.0 2.2538380608337937E-5 4.5076761216675875E-5 7 0.0 1.1269190304168969E-5 0.0 2.2538380608337937E-5 4.5076761216675875E-5 8 0.0 1.1269190304168969E-5 0.0 2.2538380608337937E-5 4.5076761216675875E-5 9 0.0 1.1269190304168969E-5 0.0 2.2538380608337937E-5 7.888433212918278E-5 10 0.0 1.1269190304168969E-5 0.0 3.380757091250691E-5 7.888433212918278E-5 11 0.0 1.1269190304168969E-5 0.0 4.5076761216675875E-5 7.888433212918278E-5 12 0.0 2.2538380608337937E-5 0.0 4.5076761216675875E-5 1.0142271273752073E-4 13 0.0 2.2538380608337937E-5 0.0 5.634595152084485E-5 1.126919030416897E-4 14 0.0 2.2538380608337937E-5 0.0 7.888433212918278E-5 1.464994739541966E-4 15 0.0 2.2538380608337937E-5 0.0 1.5776866425836557E-4 1.915762351708725E-4 16 0.0 2.2538380608337937E-5 0.0 3.4934489942923803E-4 2.591913769958863E-4 17 0.0 2.2538380608337937E-5 0.0 6.536130376418002E-4 2.591913769958863E-4 18 0.0 2.2538380608337937E-5 0.0 7.6630494068349E-4 2.704605673000553E-4 19 0.0 2.2538380608337937E-5 0.0 0.0011719957916335728 2.8172975760422424E-4 20 0.0 2.2538380608337937E-5 0.0 0.001476263929846135 3.1553732851673114E-4 21 0.0 2.2538380608337937E-5 0.0 0.0023665299638754834 3.268065188209001E-4 22 0.0 2.2538380608337937E-5 0.0 0.0038653322743299563 3.268065188209001E-4 23 0.0 2.2538380608337937E-5 0.0 0.005927594099992878 4.394984218625898E-4 24 0.0 2.2538380608337937E-5 0.0 0.008542046250560079 4.507676121667588E-4 25 0.0 2.2538380608337937E-5 0.0 0.009826733945235342 4.6203680247092774E-4 26 0.0 2.2538380608337937E-5 0.0 0.012767992614623443 4.6203680247092774E-4 27 0.0 2.2538380608337937E-5 0.0 0.024476681340655 4.6203680247092774E-4 28 0.0 2.2538380608337937E-5 0.0 0.04906605458435169 4.6203680247092774E-4 29 0.0 2.2538380608337937E-5 0.0 0.08647976639419266 4.6203680247092774E-4 30 0.0 2.2538380608337937E-5 0.0 0.15000419213879315 4.6203680247092774E-4 31 0.0 2.2538380608337937E-5 0.0 0.3861162673917414 4.6203680247092774E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 3290 0.0 19.399696 5 CAAGACG 3320 0.0 19.335844 4 CTTATAC 4515 0.0 17.823921 37 ACGGACC 3785 0.0 16.61823 8 GACGGAC 3860 0.0 16.151554 7 CGGACCA 3910 0.0 16.086956 9 CGCAAGA 4040 0.0 15.935644 2 AGACGGA 3965 0.0 15.910467 6 GCGCAAG 4115 0.0 15.5552845 1 TACTTAC 1745 0.0 14.842407 31 CCCGTTA 375 0.0 14.800001 22 TCGTTTA 2525 0.0 14.506931 30 GCAAGAC 4735 0.0 14.495248 3 TAATACC 780 0.0 14.467949 4 AGAGCGA 4315 0.0 14.405562 15 CAGAGCG 4360 0.0 14.3417425 14 GAGCGAA 4430 0.0 14.073363 16 ACGAACG 2465 0.0 14.034484 15 CGCTTCG 2270 0.0 14.017621 32 TACCGTC 2655 0.0 14.00565 7 >>END_MODULE