##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727273.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2792489 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310010173719576 31.0 31.0 34.0 30.0 34.0 2 31.53942450623798 31.0 31.0 34.0 30.0 34.0 3 31.68941077296992 31.0 31.0 34.0 30.0 34.0 4 35.49116361783341 37.0 35.0 37.0 33.0 37.0 5 35.33247078144265 37.0 35.0 37.0 33.0 37.0 6 35.35298760353219 37.0 35.0 37.0 33.0 37.0 7 35.2566069194901 37.0 35.0 37.0 32.0 37.0 8 35.27977012622073 37.0 35.0 37.0 32.0 37.0 9 36.85118258299317 39.0 37.0 39.0 33.0 39.0 10 36.59006105306055 39.0 35.0 39.0 32.0 39.0 11 36.752651845719 39.0 35.0 39.0 32.0 39.0 12 36.62151471321821 39.0 35.0 39.0 32.0 39.0 13 36.68657674211071 39.0 35.0 39.0 32.0 39.0 14 37.70824021151024 39.0 37.0 41.0 32.0 41.0 15 37.7078197980368 39.0 37.0 41.0 32.0 41.0 16 37.65074777376025 39.0 36.0 41.0 32.0 41.0 17 37.65737734329482 39.0 36.0 41.0 32.0 41.0 18 37.601439074603334 39.0 36.0 41.0 32.0 41.0 19 37.62153512511598 39.0 37.0 41.0 32.0 41.0 20 37.55698017073657 39.0 36.0 41.0 32.0 41.0 21 37.45970959957228 39.0 36.0 41.0 32.0 41.0 22 37.385329002191234 39.0 36.0 41.0 32.0 41.0 23 37.26617222126927 39.0 36.0 41.0 31.0 41.0 24 37.131476972693534 39.0 36.0 41.0 31.0 41.0 25 37.006617394016594 39.0 36.0 40.0 31.0 41.0 26 36.78022473857551 39.0 36.0 40.0 30.0 41.0 27 36.61312327461272 39.0 35.0 40.0 30.0 41.0 28 36.37976085134086 38.0 35.0 40.0 30.0 41.0 29 36.302532257065295 38.0 35.0 40.0 30.0 41.0 30 36.190759211585075 38.0 35.0 40.0 30.0 41.0 31 36.290541520485846 38.0 35.0 40.0 30.0 41.0 32 36.23378713398692 38.0 35.0 40.0 30.0 41.0 33 36.1911785507481 38.0 35.0 40.0 30.0 41.0 34 36.21596862154157 38.0 35.0 40.0 30.0 41.0 35 35.983088205539936 38.0 35.0 40.0 29.0 41.0 36 35.928593093831346 38.0 35.0 40.0 29.0 41.0 37 35.823156689247476 38.0 35.0 40.0 28.0 41.0 38 35.70715766472133 38.0 34.0 40.0 27.0 41.0 39 35.60159341719878 38.0 34.0 40.0 27.0 41.0 40 35.37088203391311 38.0 34.0 40.0 26.0 41.0 41 35.26478850946235 38.0 34.0 40.0 26.0 41.0 42 35.02596894741573 38.0 33.0 40.0 25.0 41.0 43 34.642645682758285 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 6.0 15 14.0 16 66.0 17 116.0 18 206.0 19 447.0 20 828.0 21 1743.0 22 3230.0 23 5697.0 24 9241.0 25 14702.0 26 21464.0 27 31057.0 28 43173.0 29 58834.0 30 76493.0 31 96889.0 32 120542.0 33 150653.0 34 188363.0 35 232901.0 36 294630.0 37 388978.0 38 510040.0 39 542173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.86527180590505 19.466970147420458 13.146837821026331 24.520920225648158 2 17.820947548942897 23.21377094054802 34.36342990070865 24.60185160980043 3 20.351127614110563 24.996947167920805 30.201050030993855 24.450875186974773 4 14.539144111221209 16.026455251927583 34.08006262513478 35.35433801171643 5 13.944620730824722 38.60477158549237 32.94251114328472 14.508096540398189 6 33.66319437605662 34.98248336877961 16.214280521785405 15.140041733378359 7 27.697011519114312 32.272821844598134 21.560550462329484 18.46961617395807 8 28.31907305633075 33.130336413142544 20.23782367629738 18.312766854229327 9 28.0717668001557 13.499390686946306 19.890857224504735 38.53798528839326 10 17.38921800587218 27.39190736292963 31.891370028673343 23.327504602524847 11 35.508537365769385 22.92603480264381 20.68351925468641 20.881908576900393 12 21.44738976590418 26.615861333742046 29.214152678846723 22.72259622150705 13 30.105543835624776 19.65794672781164 25.414997158448966 24.821512278114614 14 22.82157602053222 21.58887644678278 25.88715658324885 29.702390949436147 15 25.719564159429098 27.7617924367831 23.067557293869374 23.45108610991843 16 23.6621522949598 26.35698833549568 25.910218446697552 24.070640922846962 17 23.382437674776874 26.84669483031088 26.093209319714422 23.677658175197823 18 23.20546294005097 24.80321319081293 28.268544656756035 23.722779212380065 19 23.47300204226409 26.24701475995071 28.311946797283717 21.96803640050149 20 23.284317324078984 24.94777956153095 27.992590123004963 23.775312991385107 21 24.199629792633022 25.991257261890738 27.85217775253546 21.956935192940776 22 24.435405117083718 25.306742479558558 26.762934428747975 23.49491797460975 23 22.620429301601547 25.804076578278373 27.70492560579469 23.87056851432539 24 22.639480406189605 26.757025721497918 27.492964162079065 23.110529710233415 25 23.41280484900746 25.483072628039 26.814214845609058 24.289907677344477 26 22.838693366383897 26.643471111255945 27.745570349605675 22.772265172754487 27 24.091661596518374 26.121606924861656 26.68096454453357 23.1057669340864 28 22.52889805474614 26.993696304622866 27.72100445158423 22.75640118904676 29 22.73466430843595 26.802934586313498 27.955383172503094 22.507017932747452 30 22.847180418615796 27.268683959005745 27.650708740482056 22.2334268818964 31 23.201237319108508 26.849022502863935 26.876596470030854 23.073143707996703 32 22.234895106122174 26.953660336710367 27.062846084622 23.74859847254546 33 21.91672017329343 26.513193068978964 27.73937515957986 23.830711598147747 34 22.971585563989688 26.62843076552853 27.917531635755772 22.482452034726013 35 22.89530952494352 26.520211896985092 28.16401425395051 22.420464324120886 36 21.983112556575872 26.948897560563356 27.83935764832019 23.228632234540584 37 22.22218243294781 26.60579862624347 28.193486169506844 22.978532771301875 38 22.1234891166984 25.77610869729478 28.497014670424843 23.60338751558198 39 22.14572734216679 25.517916095640842 28.61389964293503 23.722456919257336 40 22.311314386556223 25.74148009177476 29.158252727226497 22.788952794442523 41 21.06436229471271 26.10961045862669 29.574762872834953 23.251264373825645 42 21.815162029286416 26.195483670660835 29.34722392818736 22.642130371865385 43 20.953206977717727 25.206652559777314 29.262317595521413 24.57782286698354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2262.0 1 2051.5 2 1841.0 3 3042.5 4 4244.0 5 4244.0 6 6129.5 7 8015.0 8 7554.5 9 7094.0 10 9512.0 11 11930.0 12 11930.0 13 20541.5 14 29153.0 15 42477.0 16 55801.0 17 48978.0 18 42155.0 19 42155.0 20 43198.5 21 44242.0 22 35550.0 23 26858.0 24 30811.5 25 34765.0 26 34765.0 27 38775.0 28 42785.0 29 46900.0 30 51015.0 31 55384.0 32 59753.0 33 59753.0 34 68198.0 35 76643.0 36 89145.0 37 101647.0 38 113980.0 39 126313.0 40 126313.0 41 139118.5 42 151924.0 43 160719.0 44 169514.0 45 186157.5 46 202801.0 47 202801.0 48 226204.5 49 249608.0 50 247898.0 51 246188.0 52 229490.0 53 212792.0 54 212792.0 55 201921.5 56 191051.0 57 182729.5 58 174408.0 59 160889.0 60 147370.0 61 147370.0 62 124521.0 63 101672.0 64 90073.5 65 78475.0 66 65660.5 67 52846.0 68 52846.0 69 43556.0 70 34266.0 71 28901.5 72 23537.0 73 17439.5 74 11342.0 75 11342.0 76 8822.5 77 6303.0 78 5559.5 79 4816.0 80 3842.0 81 2868.0 82 2868.0 83 2420.5 84 1973.0 85 1678.0 86 1383.0 87 932.5 88 482.0 89 482.0 90 328.0 91 174.0 92 131.5 93 89.0 94 87.0 95 85.0 96 85.0 97 43.5 98 2.0 99 3.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2792489.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.55088847705341 #Duplication Level Percentage of deduplicated Percentage of total 1 83.00811974935226 41.96134204139402 2 8.773440778751192 8.870104527333684 3 2.9250338991922478 4.43589187289004 4 1.4674595699501993 2.967255402605492 5 0.862038074658293 2.1788395287512605 6 0.577960292325566 1.752984376890893 7 0.40214365178320566 1.4230103225133481 8 0.3084235680520836 1.2472868313836618 9 0.22563608942074345 1.026549431343581 >10 1.2618969921337917 11.44265411531052 >50 0.09502866265974264 3.317482144588303 >100 0.07402929077554128 7.849887305474927 >500 0.013166801041019173 4.483941447908882 >1k 0.005337892313920942 4.530892772542224 >5k 7.11718975189459E-5 0.35978026541805086 >10k+ 2.1351569255683767E-4 2.152097613651155 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 25619 0.9174252790252709 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17288 0.6190892784179275 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16910 0.6055529672632551 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10000 0.35810346970032825 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3922 0.14044818081646876 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 3545 0.12694768000876638 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3544 0.12691186966179635 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 3294 0.11795928291928814 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3182 0.11394852405864446 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.581034697003283E-5 2 0.0 0.0 0.0 0.0 3.581034697003283E-5 3 0.0 0.0 0.0 0.0 3.581034697003283E-5 4 0.0 0.0 0.0 0.0 7.162069394006566E-5 5 0.0 0.0 0.0 0.0 7.162069394006566E-5 6 0.0 0.0 0.0 0.0 7.162069394006566E-5 7 0.0 0.0 0.0 0.0 7.162069394006566E-5 8 0.0 0.0 0.0 0.0 7.162069394006566E-5 9 0.0 0.0 0.0 0.0 1.0743104091009848E-4 10 0.0 0.0 0.0 3.581034697003283E-5 1.0743104091009848E-4 11 0.0 0.0 0.0 3.581034697003283E-5 1.0743104091009848E-4 12 0.0 0.0 0.0 1.432413878801313E-4 1.432413878801313E-4 13 0.0 0.0 0.0 2.1486208182019696E-4 1.7905173485016415E-4 14 0.0 0.0 0.0 3.581034697003283E-4 1.7905173485016415E-4 15 0.0 0.0 0.0 6.803965924306238E-4 2.1486208182019696E-4 16 0.0 0.0 0.0 0.0012891724909211818 2.864827757602626E-4 17 0.0 0.0 0.0 0.0022202415121420353 2.864827757602626E-4 18 0.0 0.0 0.0 0.0026141553288123965 2.864827757602626E-4 19 0.0 0.0 0.0 0.0032229312273029543 2.864827757602626E-4 20 0.0 0.0 0.0 0.004046569207613709 2.864827757602626E-4 21 0.0 0.0 0.0 0.0056938451682352195 2.864827757602626E-4 22 0.0 0.0 0.0 0.008701914313717977 2.864827757602626E-4 23 0.0 0.0 0.0 0.014037656012252868 3.2229312273029546E-4 24 0.0 0.0 0.0 0.021486208182019698 3.2229312273029546E-4 25 0.0 0.0 0.0 0.024637518715382584 3.2229312273029546E-4 26 0.0 0.0 0.0 0.03201445019120935 3.2229312273029546E-4 27 0.0 0.0 0.0 0.06463767628090926 3.2229312273029546E-4 28 0.0 0.0 0.0 0.12744902486634682 3.581034697003283E-4 29 0.0 0.0 0.0 0.2054081502201083 3.581034697003283E-4 30 0.0 0.0 0.0 0.3351132269455672 3.581034697003283E-4 31 0.0 0.0 0.0 0.7376215268887362 3.581034697003283E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGTA 45 1.323874E-4 24.666668 6 CTTATAC 2585 0.0 17.676981 37 AAGACGG 850 0.0 17.629412 5 CAAGACG 885 0.0 17.350285 4 GTATAGA 245 0.0 16.612244 1 CGCGTAT 70 0.0025937385 15.857142 7 CGCTTCG 680 0.0 15.235294 32 GTAAACG 720 0.0 14.902779 27 TACGCGT 75 0.00410636 14.8 5 TTCGGGC 710 0.0 14.59155 35 TTAGTAC 115 2.2119704E-5 14.478261 3 CTAGCGG 540 0.0 14.388888 29 TCTAGCG 545 0.0 14.256881 28 ACTCTAA 820 0.0 14.213414 10 TAAACGC 745 0.0 14.154362 28 ATACCGA 105 1.6569685E-4 14.095239 6 TTTTACG 105 1.6569685E-4 14.095239 2 ACGCTTC 750 0.0 14.060001 31 AGACGGA 1015 0.0 14.034483 6 GACGGAC 1015 0.0 14.034483 7 >>END_MODULE