##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727272.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3262282 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.108908733211905 31.0 31.0 33.0 30.0 34.0 2 31.32838240225707 31.0 31.0 34.0 30.0 34.0 3 31.467810569411228 31.0 31.0 34.0 30.0 34.0 4 35.29927792876275 37.0 35.0 37.0 33.0 37.0 5 35.12736881728802 37.0 35.0 37.0 32.0 37.0 6 35.14637759703177 37.0 35.0 37.0 32.0 37.0 7 35.05178890114343 37.0 35.0 37.0 32.0 37.0 8 35.07549132784965 37.0 35.0 37.0 32.0 37.0 9 36.58681223756867 39.0 35.0 39.0 32.0 39.0 10 36.32592890498124 38.0 35.0 39.0 32.0 39.0 11 36.49907580031401 38.0 35.0 39.0 32.0 39.0 12 36.36152791205665 38.0 35.0 39.0 32.0 39.0 13 36.429246766527235 38.0 35.0 39.0 32.0 39.0 14 37.365094740430166 39.0 36.0 41.0 32.0 41.0 15 37.37883358949349 39.0 36.0 41.0 32.0 41.0 16 37.314229425904934 39.0 36.0 41.0 32.0 41.0 17 37.34748896631254 39.0 36.0 41.0 32.0 41.0 18 37.3024410519998 39.0 36.0 41.0 32.0 41.0 19 37.34273186683432 39.0 36.0 41.0 31.0 41.0 20 37.279241647411226 39.0 36.0 40.0 31.0 41.0 21 37.186867045828656 39.0 36.0 40.0 31.0 41.0 22 37.12015668786451 39.0 36.0 40.0 31.0 41.0 23 37.00507834699759 39.0 36.0 40.0 31.0 41.0 24 36.863379070233655 39.0 36.0 40.0 30.0 41.0 25 36.73828136255541 39.0 35.0 40.0 30.0 41.0 26 36.494587531059544 38.0 35.0 40.0 30.0 41.0 27 36.3194362106035 38.0 35.0 40.0 30.0 41.0 28 36.08831333404041 38.0 35.0 40.0 29.0 41.0 29 36.0120688524168 38.0 35.0 40.0 29.0 41.0 30 35.90143555952551 38.0 34.0 40.0 29.0 41.0 31 35.94460840601763 38.0 34.0 40.0 29.0 41.0 32 35.88094162307244 38.0 34.0 40.0 29.0 41.0 33 35.803200642985495 38.0 34.0 40.0 29.0 41.0 34 35.826030061165774 38.0 34.0 40.0 29.0 41.0 35 35.58520967837851 38.0 34.0 40.0 27.0 41.0 36 35.5079885797733 38.0 34.0 40.0 27.0 41.0 37 35.398848413472535 38.0 34.0 40.0 26.0 41.0 38 35.26891789244461 38.0 34.0 40.0 26.0 41.0 39 35.12564088573581 38.0 33.0 40.0 25.0 41.0 40 34.89045183708827 38.0 33.0 40.0 25.0 41.0 41 34.766111574658474 38.0 33.0 40.0 24.0 41.0 42 34.496671041927094 38.0 33.0 40.0 23.0 41.0 43 34.12123200875951 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 3.0 14 4.0 15 16.0 16 53.0 17 116.0 18 270.0 19 624.0 20 1307.0 21 2616.0 22 4777.0 23 8359.0 24 13713.0 25 21178.0 26 30996.0 27 44303.0 28 61390.0 29 80959.0 30 102963.0 31 127388.0 32 156526.0 33 189532.0 34 231169.0 35 278260.0 36 343153.0 37 442710.0 38 564396.0 39 555498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.82689234100547 19.806442238899027 13.37931546077255 23.98734995932295 2 18.007885277851514 24.19913422567393 33.60451365026077 24.188466846213785 3 20.816685988519694 25.55373815016605 30.738605675413716 22.890970185900546 4 14.811472460075493 16.12487822941119 33.786748049371575 35.27690126114174 5 13.54321913310989 39.937626483547405 32.39204949173615 14.127104891606551 6 33.22713977516352 34.86372422739665 16.447964952140865 15.461171045298967 7 27.073410575787133 33.3951510016608 21.1941518237847 18.337286598767367 8 29.28036264185622 32.644878646297286 20.167416550745767 17.907342161100726 9 28.96588952150673 12.904954262077894 19.921974862994677 38.20718135342071 10 17.20320315656341 28.43880449329641 31.749646413154963 22.608345936985213 11 35.43675868609765 23.248817852043445 20.27378381145468 21.040639650404227 12 21.28920798385915 27.24053285399607 28.97373678915557 22.496522372989215 13 30.559865762677784 19.8359921061392 25.47707402364357 24.127068107539447 14 22.91779190149717 21.823619172101 26.43275474039338 28.825834186008443 15 26.160521990434916 28.01229323522614 23.40698934059042 22.420195433748525 16 23.30448440692742 26.54540594589922 26.46049605766761 23.68961358950575 17 23.127675657714448 26.763964611275178 26.42211801432249 23.68624171668789 18 22.272016950098124 25.214466437910644 28.818814559869445 23.694702052121798 19 23.056283914143535 26.175419537612015 29.409290797055558 21.359005751188892 20 22.66002755126626 24.91421649017467 28.94060047537276 23.48515548318631 21 23.460081010777117 26.047257717144014 29.318464804698063 21.17419646738081 22 24.165231577159794 25.345570983746963 27.606779548794368 22.882417890298875 23 22.36566305426692 26.115032360783037 28.63339220827629 22.88591237667375 24 21.775033550134538 26.685430628008245 28.654757620585837 22.88477820127138 25 22.88971339694116 25.69419197972462 27.791220991931414 23.624873631402803 26 22.17889195354663 26.845778507192204 28.650036998640825 22.32529254062034 27 23.481844917146955 26.65897675308266 27.59206592195279 22.267112407817596 28 21.71541270803689 27.75517260616955 28.069093965512486 22.46032072028108 29 22.038162243484773 27.42941903857484 28.7182407897294 21.81417792821099 30 22.610828861514733 27.639456061738375 28.1428460200559 21.606869056690993 31 22.47485042678714 27.508504782848327 27.926157211424396 22.09048757894014 32 21.89608378429578 27.639333448181365 27.65260636572804 22.811976401794816 33 21.28080895520375 27.121444436747037 28.39362139753706 23.20412521051215 34 22.28636273626866 27.558745687834467 28.65944758914159 21.495443986755284 35 22.05069947968937 27.28991546408312 28.74423486381619 21.915150192411325 36 21.229648448540008 27.787021477603712 28.51884049263675 22.464489581219528 37 21.596661478069645 27.79462351813853 28.769523909950152 21.839191093841674 38 21.857950968064685 26.88047814382693 28.36860823190638 22.89296265620201 39 21.336322243141456 27.164297874923136 28.885822868777133 22.61355701315827 40 22.086441331558706 26.72377801796411 29.00675048938136 22.18303016109582 41 20.769449115680374 27.53814661025626 29.344305611838585 22.348098662224785 42 21.32795386787531 27.20301310555004 29.200755789965427 22.268277236609222 43 20.450224719996616 26.37699622534165 29.025449056825863 24.14732999783587 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2006.0 1 1868.0 2 1730.0 3 2872.0 4 4014.0 5 4014.0 6 6340.0 7 8666.0 8 8371.5 9 8077.0 10 11190.0 11 14303.0 12 14303.0 13 26724.5 14 39146.0 15 61075.0 16 83004.0 17 71377.0 18 59750.0 19 59750.0 20 62327.5 21 64905.0 22 51910.5 23 38916.0 24 44121.0 25 49326.0 26 49326.0 27 54939.5 28 60553.0 29 64774.0 30 68995.0 31 73406.0 32 77817.0 33 77817.0 34 85062.5 35 92308.0 36 103566.0 37 114824.0 38 126280.5 39 137737.0 40 137737.0 41 153647.5 42 169558.0 43 179474.0 44 189390.0 45 209954.0 46 230518.0 47 230518.0 48 256773.5 49 283029.0 50 282870.0 51 282711.0 52 270482.0 53 258253.0 54 258253.0 55 240581.5 56 222910.0 57 210082.5 58 197255.0 59 178910.5 60 160566.0 61 160566.0 62 136945.5 63 113325.0 64 100257.0 65 87189.0 66 72434.5 67 57680.0 68 57680.0 69 46130.5 70 34581.0 71 28678.5 72 22776.0 73 16442.0 74 10108.0 75 10108.0 76 7945.0 77 5782.0 78 4980.5 79 4179.0 80 3374.5 81 2570.0 82 2570.0 83 2130.0 84 1690.0 85 1515.5 86 1341.0 87 899.5 88 458.0 89 458.0 90 318.0 91 178.0 92 121.5 93 65.0 94 77.0 95 89.0 96 89.0 97 44.5 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3262282.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.735945295072504 #Duplication Level Percentage of deduplicated Percentage of total 1 81.7386986637702 39.018740479041504 2 9.33513871549442 8.9124334208951 3 3.0694992438749136 4.3957634396663785 4 1.570864620223127 2.999468303077441 5 0.9134629837281792 2.1802509510161037 6 0.6027439094400288 1.7263530172780415 7 0.43174823683661745 1.4426937150413746 8 0.3242881585278566 1.2384161436260448 9 0.25080931440805315 1.077535774086972 >10 1.5427500395652356 13.495536783570227 >50 0.11518102039879516 3.769925304898911 >100 0.0876544734773412 8.528576334347663 >500 0.012064045066844505 3.9711984095205324 >1k 0.0047740071385626555 3.871080023123293 >5k 6.451360998057642E-5 0.16666893464712224 >10k+ 2.580544399223057E-4 3.2053589661634194 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39634 1.2149164296648787 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25864 0.7928192596470814 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24490 0.7507015028130616 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14095 0.4320595215251165 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 5412 0.16589614263880315 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3902 0.11960952486633589 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3328 0.10201447943494768 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.065338925328957E-5 2 0.0 0.0 0.0 0.0 3.065338925328957E-5 3 0.0 0.0 0.0 0.0 3.065338925328957E-5 4 0.0 0.0 0.0 0.0 3.065338925328957E-5 5 0.0 0.0 0.0 0.0 3.065338925328957E-5 6 0.0 0.0 0.0 0.0 3.065338925328957E-5 7 0.0 0.0 0.0 0.0 3.065338925328957E-5 8 0.0 0.0 0.0 0.0 3.065338925328957E-5 9 0.0 0.0 0.0 3.065338925328957E-5 3.065338925328957E-5 10 0.0 0.0 0.0 6.130677850657913E-5 3.065338925328957E-5 11 0.0 0.0 0.0 6.130677850657913E-5 3.065338925328957E-5 12 0.0 0.0 0.0 9.196016775986871E-5 6.130677850657913E-5 13 0.0 0.0 0.0 9.196016775986871E-5 6.130677850657913E-5 14 0.0 0.0 0.0 9.196016775986871E-5 1.2261355701315827E-4 15 0.0 0.0 0.0 1.5326694626644784E-4 1.2261355701315827E-4 16 0.0 0.0 0.0 7.050279528256601E-4 1.2261355701315827E-4 17 0.0 0.0 0.0 0.0013180957378914515 1.2261355701315827E-4 18 0.0 0.0 0.0 0.0016552830196776367 1.2261355701315827E-4 19 0.0 3.065338925328957E-5 0.0 0.002053777079970401 1.2261355701315827E-4 20 0.0 3.065338925328957E-5 0.0 0.0026055380865296135 1.2261355701315827E-4 21 0.0 3.065338925328957E-5 0.0 0.004046247381434223 1.5326694626644784E-4 22 0.0 3.065338925328957E-5 0.0 0.006498518521697388 1.5326694626644784E-4 23 0.0 3.065338925328957E-5 0.0 0.010422152346118454 1.8392033551973741E-4 24 0.0 3.065338925328957E-5 0.0 0.014805587009338862 1.8392033551973741E-4 25 0.0 3.065338925328957E-5 0.0 0.016706097143042813 1.8392033551973741E-4 26 0.0 3.065338925328957E-5 0.0 0.02124279875252967 1.8392033551973741E-4 27 0.0 3.065338925328957E-5 0.0 0.03773432217079946 1.8392033551973741E-4 28 0.0 3.065338925328957E-5 0.0 0.0672841894109706 1.8392033551973741E-4 29 0.0 3.065338925328957E-5 0.0 0.10722555560800691 1.8392033551973741E-4 30 0.0 3.065338925328957E-5 0.0 0.18226505250005978 1.8392033551973741E-4 31 0.0 3.065338925328957E-5 0.0 0.4173458946835375 1.8392033551973741E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGACG 700 0.0 18.764284 4 CTTATAC 1630 0.0 18.5 37 AAGACGG 670 0.0 17.119404 5 ACGGACC 730 0.0 15.965754 8 CGACTAT 70 0.0025938633 15.857143 36 TCGTTAC 935 0.0 15.037433 23 GGGCGTC 960 0.0 14.645833 11 TCTTATA 2665 0.0 14.439025 37 TACGGAT 1320 0.0 14.435606 27 ACGGATG 1375 0.0 14.127273 28 GGCGTCA 1000 0.0 14.060001 12 CGTTACG 740 0.0 14.0 24 AGACGGA 875 0.0 13.954286 6 GAACAGT 2095 0.0 13.952267 1 TACTTAC 1070 0.0 13.831776 31 TAGTACT 175 3.5724952E-8 13.742857 4 AGGGCGT 1045 0.0 13.631578 10 AACAGTG 2145 0.0 13.627039 2 GACGGAC 815 0.0 13.619632 7 ACAGTGG 2315 0.0 13.5054 3 >>END_MODULE