##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727271.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5990731 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.202448248803027 31.0 31.0 34.0 30.0 34.0 2 31.437072704482976 31.0 31.0 34.0 30.0 34.0 3 31.586742920020946 31.0 31.0 34.0 30.0 34.0 4 35.40417521668057 37.0 35.0 37.0 33.0 37.0 5 35.22203834557085 37.0 35.0 37.0 33.0 37.0 6 35.22561904381953 37.0 35.0 37.0 32.0 37.0 7 35.12730883760263 37.0 35.0 37.0 32.0 37.0 8 35.13249952301314 37.0 35.0 37.0 32.0 37.0 9 36.698518094035606 39.0 35.0 39.0 32.0 39.0 10 36.432707293984656 38.0 35.0 39.0 32.0 39.0 11 36.58702535633798 39.0 35.0 39.0 32.0 39.0 12 36.43774991733062 38.0 35.0 39.0 32.0 39.0 13 36.50141593738727 38.0 35.0 39.0 32.0 39.0 14 37.51673243215227 39.0 36.0 41.0 32.0 41.0 15 37.52213978561214 39.0 36.0 41.0 32.0 41.0 16 37.47014646459672 39.0 36.0 41.0 32.0 41.0 17 37.45140684834622 39.0 36.0 41.0 32.0 41.0 18 37.385350135066986 39.0 36.0 41.0 32.0 41.0 19 37.402842491175115 39.0 36.0 41.0 32.0 41.0 20 37.32075768382857 39.0 36.0 41.0 31.0 41.0 21 37.21730386492066 39.0 36.0 40.0 31.0 41.0 22 37.14373871903112 39.0 36.0 40.0 31.0 41.0 23 37.03850915689588 39.0 36.0 40.0 31.0 41.0 24 36.90190245564356 39.0 36.0 40.0 30.0 41.0 25 36.78220788080787 39.0 35.0 40.0 30.0 41.0 26 36.558299980419754 38.0 35.0 40.0 30.0 41.0 27 36.39569211169722 38.0 35.0 40.0 30.0 41.0 28 36.183513831617546 38.0 35.0 40.0 29.0 41.0 29 36.12501162212091 38.0 35.0 40.0 29.0 41.0 30 36.03629740677724 38.0 35.0 40.0 29.0 41.0 31 36.16937031557585 38.0 35.0 40.0 30.0 41.0 32 36.15023141583222 38.0 35.0 40.0 30.0 41.0 33 36.14142297492577 38.0 35.0 40.0 30.0 41.0 34 36.188941049097345 38.0 35.0 40.0 30.0 41.0 35 35.97963887879459 38.0 35.0 40.0 29.0 41.0 36 35.94452062694853 38.0 35.0 40.0 28.0 41.0 37 35.86131508825885 38.0 34.0 40.0 28.0 41.0 38 35.765098282663665 38.0 34.0 40.0 27.0 41.0 39 35.69236392019605 38.0 34.0 40.0 27.0 41.0 40 35.49900070625772 38.0 34.0 40.0 27.0 41.0 41 35.431691725099995 38.0 34.0 40.0 26.0 41.0 42 35.22045957329748 38.0 33.0 40.0 26.0 41.0 43 34.86584057938839 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 5.0 14 7.0 15 45.0 16 127.0 17 247.0 18 444.0 19 968.0 20 1978.0 21 4005.0 22 7591.0 23 13122.0 24 21749.0 25 34200.0 26 51361.0 27 73563.0 28 102304.0 29 136340.0 30 175941.0 31 220901.0 32 271530.0 33 332115.0 34 406431.0 35 496468.0 36 615242.0 37 790508.0 38 1071523.0 39 1162013.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.512608227610286 19.319729094829995 12.496488325047478 25.67117435251224 2 18.42649920351957 22.638088740756345 33.54991235627172 25.385499699452367 3 20.1487765015655 24.15825380909275 30.229916849880254 25.463052839461497 4 14.631135999930558 15.653315096271223 34.33691147207244 35.37863743172578 5 14.317251100074433 37.95057731685832 33.24021726230071 14.491954320766531 6 34.53157886742035 35.201447035428565 15.633150612170702 14.633823484980379 7 28.58305605776657 31.84704838190865 20.945340393350996 18.62455516697378 8 28.531826917282714 32.88465130549177 19.81192278538295 18.771598991842563 9 28.178864983254964 13.070057727512719 19.01674436725668 39.734332921975636 10 16.930755194983718 26.963771199207574 32.34202971223378 23.763443893574923 11 36.87798701026636 21.911833464063065 20.570043956238397 20.64013556943218 12 21.86212333686824 25.670005880751447 28.96401123669215 23.50385954568816 13 30.637980573656204 19.189778342576222 24.739685357262744 25.43255572650483 14 23.035803143222424 20.72932334968804 25.00345951103463 31.231413996054908 15 25.8532222528436 27.56182843128827 22.12818435680053 24.456764959067602 16 24.708069849906465 26.010398397123822 24.58361091492841 24.697920838041302 17 24.114920199221096 26.02470382996666 25.234900381940033 24.62547558887221 18 24.02536518498327 24.66558755517482 26.936562499634853 24.372484760207062 19 24.501567504867104 25.36456736248047 27.00251438430469 23.13135074834774 20 24.231249909234784 24.49615914986001 26.535693223414636 24.73689771749057 21 24.956169789630014 25.33230084942889 26.540433880272708 23.171095480668384 22 25.268902910179076 24.741504834718835 25.704959878852847 24.28463237624924 23 23.76918609765653 24.963547854176728 26.49205914937593 24.775206898790817 24 23.73211215793198 25.65790385180039 26.33207867286981 24.277905317397828 25 24.445447475441647 24.692111864144792 25.826414172160295 25.03602648825327 26 23.87852166955919 25.803695742639754 26.442098635375217 23.875683952425838 27 24.931565112838484 25.405914570358778 25.628792212502947 24.033728104299794 28 23.553870137050055 26.11357445360174 26.313767051132825 24.018788358215385 29 23.76608130126357 26.07528196475522 26.545959082455884 23.61267765152533 30 23.949898601689846 26.315352834236755 26.28098307201575 23.453765492057645 31 24.14606831787306 26.03817464012322 25.809955412786856 24.00580162921687 32 23.50330869471522 26.115110159344496 25.694577172635526 24.687003973304762 33 23.113623362491158 25.64501727752423 26.40831310903461 24.83304625095001 34 24.10118230980493 25.849716837561225 26.60995795003982 23.439142902594025 35 24.133765979477296 25.718330534287055 26.72814052241705 23.419762963818606 36 23.139363126136026 26.311229798166536 26.488587119001007 24.060819956696434 37 23.499920126608924 25.986227724129158 26.795110646764144 23.718741502497775 38 23.34471369186832 25.366637226742444 26.900606954309918 24.388042127079316 39 23.306888591726118 25.245867324037754 27.071854837080817 24.37538924715531 40 23.650035362963216 25.21910932071562 27.450105838502846 23.680749477818317 41 22.61842503026759 25.466808641549754 27.827038136080557 24.087728192102098 42 23.235762046401348 25.468361039746235 27.7172518679273 23.578625045925115 43 22.52422951389405 24.550125852754864 27.75228932829733 25.173355305053757 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 877.0 1 968.5 2 1060.0 3 2153.5 4 3247.0 5 3247.0 6 5250.0 7 7253.0 8 7084.0 9 6915.0 10 9452.0 11 11989.0 12 11989.0 13 22314.5 14 32640.0 15 54008.0 16 75376.0 17 66646.0 18 57916.0 19 57916.0 20 61118.0 21 64320.0 22 54544.5 23 44769.0 24 53236.0 25 61703.0 26 61703.0 27 71123.5 28 80544.0 29 90157.5 30 99771.0 31 111586.0 32 123401.0 33 123401.0 34 142125.5 35 160850.0 36 188280.5 37 215711.0 38 244786.0 39 273861.0 40 273861.0 41 301656.5 42 329452.0 43 348956.0 44 368460.0 45 402312.5 46 436165.0 47 436165.0 48 478880.5 49 521596.0 50 528826.0 51 536056.0 52 517085.0 53 498114.0 54 498114.0 55 477964.5 56 457815.0 57 435542.5 58 413270.0 59 383090.0 60 352910.0 61 352910.0 62 298816.0 63 244722.0 64 215158.5 65 185595.0 66 155299.5 67 125004.0 68 125004.0 69 102642.0 70 80280.0 71 66929.5 72 53579.0 73 39748.5 74 25918.0 75 25918.0 76 20257.5 77 14597.0 78 12633.5 79 10670.0 80 8290.0 81 5910.0 82 5910.0 83 4870.0 84 3830.0 85 3335.5 86 2841.0 87 1919.5 88 998.0 89 998.0 90 686.5 91 375.0 92 278.5 93 182.0 94 178.0 95 174.0 96 174.0 97 91.5 98 9.0 99 7.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5990731.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.65366465946291 #Duplication Level Percentage of deduplicated Percentage of total 1 79.70647702446082 37.185992502863805 2 10.375259911989342 9.68087793377439 3 3.4955971812300057 4.892472560330054 4 1.6998083724102737 3.1720915916710544 5 1.0090534396038424 2.353802039737764 6 0.6731291800271365 1.8842365822491163 7 0.48087465086766434 1.5704195293371421 8 0.35335928804470135 1.3188404582995246 9 0.29568507917104514 1.2415313275607414 >10 1.6950303247193395 14.695774704930741 >50 0.12394560243480925 3.9512832113540073 >100 0.07447775394615701 6.829985854603065 >500 0.009707865064546973 3.2420636135741336 >1k 0.007415214567423383 6.21315679384934 >5k 3.5822292595168956E-5 0.12176663573132716 >10k+ 1.4328917038067583E-4 1.6457046601338523 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38042 0.6350143246291646 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24677 0.4119196805865595 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23939 0.39960064973706877 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11814 0.19720464831420406 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7286 0.12162121784470042 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6692453725597094E-5 2 0.0 0.0 0.0 0.0 1.6692453725597094E-5 3 0.0 0.0 0.0 0.0 1.6692453725597094E-5 4 0.0 0.0 0.0 0.0 3.338490745119419E-5 5 0.0 0.0 0.0 0.0 3.338490745119419E-5 6 0.0 0.0 0.0 0.0 1.0015472235358257E-4 7 0.0 1.6692453725597094E-5 0.0 1.6692453725597094E-5 1.0015472235358257E-4 8 0.0 1.6692453725597094E-5 0.0 1.6692453725597094E-5 1.0015472235358257E-4 9 0.0 1.6692453725597094E-5 0.0 1.6692453725597094E-5 1.6692453725597093E-4 10 0.0 1.6692453725597094E-5 0.0 5.007736117679128E-5 1.6692453725597093E-4 11 0.0 1.6692453725597094E-5 0.0 5.007736117679128E-5 1.6692453725597093E-4 12 0.0 1.6692453725597094E-5 0.0 5.007736117679128E-5 1.8361699098156802E-4 13 0.0 1.6692453725597094E-5 0.0 6.676981490238838E-5 2.0030944470716513E-4 14 0.0 1.6692453725597094E-5 0.0 8.346226862798546E-5 3.004641670607477E-4 15 0.0 1.6692453725597094E-5 0.0 1.8361699098156802E-4 4.1731134313992735E-4 16 0.0 1.6692453725597094E-5 0.0 5.50850972944704E-4 4.506962505911215E-4 17 0.0 1.6692453725597094E-5 0.0 9.514698623590344E-4 4.506962505911215E-4 18 0.0 1.6692453725597094E-5 0.0 0.0011350868533406024 4.840811580423157E-4 19 0.0 1.6692453725597094E-5 0.0 0.0013353962980477674 4.840811580423157E-4 20 0.0 1.6692453725597094E-5 0.0 0.0016692453725597094 4.840811580423157E-4 21 0.0 1.6692453725597094E-5 0.0 0.002537252966290758 4.840811580423157E-4 22 0.0 1.6692453725597094E-5 0.0 0.003989496440417705 5.007736117679128E-4 23 0.0 1.6692453725597094E-5 0.0 0.006426594684354881 5.842358803958982E-4 24 0.0 1.6692453725597094E-5 0.0 0.00913077218790161 5.842358803958982E-4 25 0.0 1.6692453725597094E-5 0.0 0.010416091124772587 5.842358803958982E-4 26 0.0 1.6692453725597094E-5 0.0 0.013487502610282451 5.842358803958982E-4 27 0.0 1.6692453725597094E-5 0.0 0.026691233507229753 5.842358803958982E-4 28 0.0 1.6692453725597094E-5 0.0 0.04944304793521859 5.842358803958982E-4 29 0.0 1.6692453725597094E-5 0.0 0.08252749121935203 5.842358803958982E-4 30 0.0 1.6692453725597094E-5 0.0 0.13762928096754803 5.842358803958982E-4 31 0.0 1.6692453725597094E-5 0.0 0.318391862362039 5.842358803958982E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1825 0.0 16.523289 5 CTTATAC 2785 0.0 16.407541 37 CAAGACG 1980 0.0 15.883839 4 ACGGACC 1975 0.0 14.987341 8 CGCATCG 1375 0.0 14.530909 13 TCTTATA 4410 0.0 14.388889 37 TCGTTTA 1310 0.0 14.263359 30 CGCAAGA 2180 0.0 14.172018 2 CTAGCGG 1065 0.0 14.070422 29 TCTAGCG 1070 0.0 14.004673 28 TAACGCC 1490 0.0 13.90604 4 ATAACGC 1635 0.0 13.804281 3 ATACCGT 1455 0.0 13.731958 6 TACCGTC 1380 0.0 13.673914 7 GACGGAC 2165 0.0 13.586605 7 GCGCAAG 2350 0.0 13.540424 1 CGGACCA 2155 0.0 13.477959 9 TCGTTAC 1100 0.0 13.454546 23 TTAGAGT 1040 0.0 13.341346 4 TACGGAT 1805 0.0 13.3241 27 >>END_MODULE