##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727270.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3302029 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.926268364087658 31.0 31.0 33.0 28.0 34.0 2 31.160558856387997 31.0 31.0 34.0 28.0 34.0 3 31.294217585611754 31.0 31.0 34.0 28.0 34.0 4 35.14595631958411 35.0 35.0 37.0 32.0 37.0 5 34.950918056746325 35.0 35.0 37.0 32.0 37.0 6 34.977922967969086 36.0 35.0 37.0 32.0 37.0 7 34.889127260844774 35.0 35.0 37.0 32.0 37.0 8 34.90571978622841 36.0 35.0 37.0 32.0 37.0 9 36.41248426346346 38.0 35.0 39.0 32.0 39.0 10 36.12672844484406 38.0 35.0 39.0 31.0 39.0 11 36.30178959663891 38.0 35.0 39.0 32.0 39.0 12 36.14017442003084 38.0 35.0 39.0 31.0 39.0 13 36.21698810034679 38.0 35.0 39.0 32.0 39.0 14 37.13099672958656 39.0 36.0 40.0 31.0 41.0 15 37.142416374901615 39.0 36.0 40.0 31.0 41.0 16 37.07589061149978 39.0 36.0 40.0 31.0 41.0 17 37.070063588175636 39.0 36.0 40.0 31.0 41.0 18 37.00590212866089 39.0 36.0 40.0 31.0 41.0 19 37.02374691439718 39.0 36.0 40.0 31.0 41.0 20 36.942353322760034 39.0 36.0 40.0 31.0 41.0 21 36.82787916157005 39.0 36.0 40.0 30.0 41.0 22 36.74186447181415 39.0 35.0 40.0 30.0 41.0 23 36.610049457469934 38.0 35.0 40.0 30.0 41.0 24 36.45298663336997 38.0 35.0 40.0 30.0 41.0 25 36.31996296822348 38.0 35.0 40.0 30.0 41.0 26 36.06140194407742 38.0 34.0 40.0 29.0 41.0 27 35.87714129706311 38.0 34.0 40.0 28.0 41.0 28 35.620564810303 38.0 34.0 40.0 27.0 41.0 29 35.54595704640995 38.0 34.0 40.0 27.0 41.0 30 35.44068450034812 38.0 34.0 40.0 27.0 41.0 31 35.572728161987676 38.0 34.0 40.0 27.0 41.0 32 35.538544634223385 38.0 34.0 40.0 27.0 41.0 33 35.477682055487705 38.0 34.0 40.0 27.0 41.0 34 35.52265531283947 38.0 34.0 40.0 27.0 41.0 35 35.263818700562595 38.0 34.0 40.0 26.0 41.0 36 35.214091396532254 38.0 33.0 40.0 26.0 41.0 37 35.11645900142003 38.0 33.0 40.0 25.0 41.0 38 34.99638616135715 38.0 33.0 40.0 25.0 41.0 39 34.884095808970784 38.0 33.0 40.0 25.0 41.0 40 34.64903185283957 38.0 33.0 40.0 24.0 41.0 41 34.55804991415884 37.0 33.0 40.0 24.0 41.0 42 34.28776428068924 37.0 33.0 40.0 23.0 41.0 43 33.941621045726734 37.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 4.0 14 8.0 15 26.0 16 89.0 17 191.0 18 376.0 19 944.0 20 1743.0 21 3486.0 22 6292.0 23 10516.0 24 17077.0 25 25845.0 26 37313.0 27 52074.0 28 69602.0 29 91108.0 30 114120.0 31 140441.0 32 168120.0 33 201603.0 34 242002.0 35 289056.0 36 353100.0 37 443422.0 38 577610.0 39 455859.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.285797308261074 20.839217341822255 13.61826319514456 24.256722154772113 2 19.288080147085324 23.928045453265252 32.54595886347455 24.237915536174878 3 21.194362617651148 24.962530613752936 30.274809821476435 23.56829694711948 4 15.39838081373604 16.67810912623723 33.807728520857935 34.11578153916879 5 14.092244495732775 39.12367214218894 32.640597644660296 14.143485717417986 6 33.77583903714959 35.43539441961291 15.84774088901097 14.94102565422654 7 27.969893662351243 32.698471152131006 20.791579964924598 18.540055220593157 8 28.891508826845552 32.66603654904303 19.80621611742356 18.636238506687857 9 28.395571329022246 13.14737090437425 19.622086904748564 38.83497086185494 10 17.467896254091045 27.588824931579946 31.635124948932912 23.308153865396093 11 36.60061737798184 22.520335224190944 20.210906687978817 20.668140709848398 12 21.44393644029171 26.66242483030888 28.605866271919478 23.28777245747993 13 30.625291298168488 19.453523878803004 25.155624011781846 24.76556081124666 14 23.05748980399627 21.433276327978948 25.309680805347256 30.199553062677527 15 26.13614235368617 28.161200280191363 22.196292037410934 23.506365328711528 16 24.53370336844407 26.223452307656895 25.025461617690215 24.217382706208817 17 23.953847770567734 26.648160873208564 25.166102417634733 24.231888938588973 18 23.48241036041779 24.63842685815297 27.24748934670168 24.631673434727556 19 23.91120732131668 25.895532716399522 27.467596438432253 22.725663523851548 20 23.898669575585192 24.53318853347442 26.928715647258095 24.639426243682294 21 24.925644202397983 25.581543953732687 27.175806148280344 22.317005695588986 22 25.294054049797865 25.095146045052907 26.01415675028899 23.59664315486024 23 23.673050721238365 25.38463472004637 26.782108818547627 24.160205740167637 24 23.059428006234956 26.211126552795267 26.86012145865466 23.869323982315116 25 24.037705301800802 25.231698449650196 26.174997251689796 24.555598996859203 26 23.30633680079733 26.5411660527512 26.783441332586722 23.369055813864748 27 24.7937858813475 25.9173677759947 25.969941511719007 23.318904830938795 28 23.26502886558537 26.62575040982378 26.688560276121137 23.420660448469715 29 23.210062661472687 26.5270232332908 27.080622247714963 23.18229185752154 30 23.43719573631849 27.064904638935637 26.697827305574844 22.80007231917103 31 23.76132977632843 26.791254710361418 26.10379860382813 23.34361690948202 32 23.279535097965525 26.83489454514179 25.76367439534904 24.121895961543643 33 22.616427657055706 26.258339947953214 26.728535697294 24.39669669769708 34 23.81893072410933 26.500645512198712 27.01160407737182 22.668819686320138 35 23.48734671924444 26.21624461808179 27.43498012888439 22.861428533789375 36 22.419881836289143 27.015329059799292 26.874385415754983 23.690403688156586 37 23.205519999975774 26.674902007220407 27.111088364154284 23.008489628649535 38 22.904856377699893 25.877271217181917 27.159846264221184 24.058026140897006 39 22.99537647912844 26.069304660861548 27.21669010175259 23.718628758257424 40 23.015000776795116 25.758495761242557 27.78585530290618 23.440648159056142 41 21.963404924669046 26.492014455354575 28.174495136172332 23.370085483804047 42 22.638747267210555 25.966367951341436 28.162684216280354 23.23220056516766 43 21.86855415261344 25.04366254808786 28.05705219427207 25.03073110502664 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1677.0 1 1485.0 2 1293.0 3 1780.5 4 2268.0 5 2268.0 6 3706.5 7 5145.0 8 5164.5 9 5184.0 10 7206.0 11 9228.0 12 9228.0 13 17413.5 14 25599.0 15 40685.5 16 55772.0 17 47995.5 18 40219.0 19 40219.0 20 43465.5 21 46712.0 22 39348.5 23 31985.0 24 36924.0 25 41863.0 26 41863.0 27 46968.0 28 52073.0 29 56847.0 30 61621.0 31 66878.5 32 72136.0 33 72136.0 34 80482.0 35 88828.0 36 101154.0 37 113480.0 38 125875.5 39 138271.0 40 138271.0 41 157498.0 42 176725.0 43 188779.0 44 200833.0 45 219725.5 46 238618.0 47 238618.0 48 261876.5 49 285135.0 50 284041.5 51 282948.0 52 278911.5 53 274875.0 54 274875.0 55 258440.0 56 242005.0 57 231001.0 58 219997.0 59 200895.5 60 181794.0 61 181794.0 62 155917.5 63 130041.0 64 117384.0 65 104727.0 66 87750.5 67 70774.0 68 70774.0 69 56353.0 70 41932.0 71 34729.0 72 27526.0 73 19713.0 74 11900.0 75 11900.0 76 9172.0 77 6444.0 78 5662.0 79 4880.0 80 3871.5 81 2863.0 82 2863.0 83 2419.5 84 1976.0 85 1793.5 86 1611.0 87 1104.5 88 598.0 89 598.0 90 425.5 91 253.0 92 180.5 93 108.0 94 103.5 95 99.0 96 99.0 97 55.0 98 11.0 99 6.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3302029.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.68671992764771 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1523897603998 37.887388922030915 2 9.49175354794652 8.862776790304713 3 3.2265101421255333 4.519055260473888 4 1.6123127919547156 3.010943830150141 5 0.9896431903822399 2.3101597228839688 6 0.6397363303092233 1.79203145284127 7 0.4738928633064703 1.5487152369430153 8 0.3510365596246092 1.3110996434847306 9 0.25926400180000203 1.089376725542206 >10 1.5819085098306571 13.602201732319209 >50 0.11257509376112068 3.6594577341855645 >100 0.0885216472332449 8.466973608375698 >500 0.013224455252300584 4.3469062967456225 >1k 0.00697052567461321 5.566937916115924 >5k 6.514509976274029E-5 0.27083765197943754 >10k+ 1.9543529928822085E-4 1.7551374756237377 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26489 0.802203735945384 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16793 0.5085660967847344 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14426 0.4368828983634002 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8905 0.26968267086691244 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3924 0.11883602475932223 No Hit GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG 3847 0.11650412519090535 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 3788 0.1147173450021184 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 3728 0.112900280403352 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 3659 0.11081065611477064 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 3558 0.10775193070684722 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3397 0.1028761407001574 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.0284409979439913E-5 2 0.0 0.0 0.0 0.0 3.0284409979439913E-5 3 0.0 0.0 0.0 0.0 3.0284409979439913E-5 4 0.0 0.0 0.0 0.0 3.0284409979439913E-5 5 0.0 0.0 0.0 0.0 3.0284409979439913E-5 6 0.0 0.0 0.0 0.0 3.0284409979439913E-5 7 0.0 0.0 0.0 0.0 6.056881995887983E-5 8 0.0 0.0 0.0 0.0 9.085322993831975E-5 9 0.0 0.0 0.0 0.0 9.085322993831975E-5 10 0.0 0.0 0.0 0.0 9.085322993831975E-5 11 0.0 0.0 0.0 0.0 9.085322993831975E-5 12 0.0 0.0 0.0 0.0 9.085322993831975E-5 13 0.0 0.0 0.0 0.0 9.085322993831975E-5 14 0.0 0.0 0.0 6.056881995887983E-5 1.5142204989719956E-4 15 0.0 0.0 0.0 2.119908698560794E-4 1.817064598766395E-4 16 0.0 0.0 0.0 4.845505596710386E-4 1.817064598766395E-4 17 0.0 0.0 0.0 7.873946594654377E-4 2.119908698560794E-4 18 0.0 0.0 0.0 9.993855293215172E-4 2.119908698560794E-4 19 0.0 0.0 0.0 0.0012719452191364763 2.119908698560794E-4 20 0.0 0.0 0.0 0.0016353581388897553 2.119908698560794E-4 21 0.0 0.0 0.0 0.002422752798355193 2.422752798355193E-4 22 0.0 0.0 0.0 0.003876404477368309 2.422752798355193E-4 23 0.0 0.0 0.0 0.006026597585908543 2.7255968981495924E-4 24 0.0 0.0 0.0 0.008933900943934774 2.7255968981495924E-4 25 3.0284409979439913E-5 0.0 0.0 0.010266414983030131 3.028440997943991E-4 26 3.0284409979439913E-5 0.0 0.0 0.013658268900727402 3.028440997943991E-4 27 3.0284409979439913E-5 0.0 0.0 0.026710849601866003 3.028440997943991E-4 28 3.0284409979439913E-5 0.0 0.0 0.051786341064842256 3.028440997943991E-4 29 3.0284409979439913E-5 0.0 0.0 0.0882487706800879 3.028440997943991E-4 30 3.0284409979439913E-5 0.0 0.0 0.15481390381489685 3.028440997943991E-4 31 3.0284409979439913E-5 0.0 0.0 0.36023305670543776 3.028440997943991E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 815 0.0 18.84049 5 CAAGACG 980 0.0 16.989796 4 ATCGATA 90 4.4500157E-5 16.444445 23 CGAACGA 1060 0.0 16.056604 16 CGAACGT 380 0.0 15.578948 4 ACGAACG 1115 0.0 15.264574 15 TAACGAA 1120 0.0 15.196428 13 CTTATAC 1635 0.0 15.162081 37 GTTACGG 800 0.0 15.031251 25 TACGGAT 975 0.0 14.8 27 AACGAAC 1150 0.0 14.8 14 GTACTAG 125 2.9626262E-6 14.799999 1 CGCTTCG 585 0.0 14.547009 32 ATAACGA 1165 0.0 14.450644 12 ACGGATG 1025 0.0 14.439024 28 TATACTG 390 0.0 14.23077 5 TCTTATA 2540 0.0 14.202755 37 CGTTACG 575 0.0 14.156522 24 CCGATAA 1190 0.0 14.1470585 9 TCGTTAC 650 0.0 13.946154 23 >>END_MODULE