##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727268.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6500214 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21758360570898 31.0 31.0 34.0 30.0 34.0 2 31.46336612917667 31.0 31.0 34.0 30.0 34.0 3 31.61688415181408 31.0 31.0 34.0 30.0 34.0 4 35.42842774099437 37.0 35.0 37.0 33.0 37.0 5 35.24165512089294 37.0 35.0 37.0 33.0 37.0 6 35.245837752418616 37.0 35.0 37.0 32.0 37.0 7 35.14740037789525 37.0 35.0 37.0 32.0 37.0 8 35.1498262980265 37.0 35.0 37.0 32.0 37.0 9 36.72879154440146 39.0 35.0 39.0 32.0 39.0 10 36.45919826639554 38.0 35.0 39.0 32.0 39.0 11 36.61335365266436 39.0 35.0 39.0 32.0 39.0 12 36.462719073556656 38.0 35.0 39.0 32.0 39.0 13 36.52496225508883 38.0 35.0 39.0 32.0 39.0 14 37.555478481170006 39.0 36.0 41.0 32.0 41.0 15 37.555741703273156 39.0 36.0 41.0 32.0 41.0 16 37.50210516146084 39.0 36.0 41.0 32.0 41.0 17 37.465810664079676 39.0 36.0 41.0 32.0 41.0 18 37.390328226116864 39.0 36.0 41.0 32.0 41.0 19 37.39584404451915 39.0 36.0 41.0 32.0 41.0 20 37.30977380129331 39.0 36.0 41.0 31.0 41.0 21 37.19896144957689 39.0 36.0 40.0 31.0 41.0 22 37.124252678450276 39.0 36.0 40.0 31.0 41.0 23 37.014557520721624 39.0 36.0 40.0 31.0 41.0 24 36.87477319977465 39.0 36.0 40.0 30.0 41.0 25 36.744318725506574 39.0 35.0 40.0 30.0 41.0 26 36.52315369924744 38.0 35.0 40.0 30.0 41.0 27 36.361845010025824 38.0 35.0 40.0 30.0 41.0 28 36.13333361024729 38.0 35.0 40.0 29.0 41.0 29 36.07360296137943 38.0 35.0 40.0 29.0 41.0 30 35.98469650383818 38.0 34.0 40.0 29.0 41.0 31 36.149058784833855 38.0 35.0 40.0 30.0 41.0 32 36.13576014574289 38.0 35.0 40.0 30.0 41.0 33 36.14226377777716 38.0 35.0 40.0 29.0 41.0 34 36.19283965112533 38.0 35.0 40.0 30.0 41.0 35 35.98494726481313 38.0 35.0 40.0 28.0 41.0 36 35.955343008707096 38.0 35.0 40.0 28.0 41.0 37 35.87983287934828 38.0 34.0 40.0 28.0 41.0 38 35.784587707420094 38.0 34.0 40.0 27.0 41.0 39 35.717427610844815 38.0 34.0 40.0 27.0 41.0 40 35.527548939158 38.0 34.0 40.0 27.0 41.0 41 35.46868226184554 38.0 34.0 40.0 26.0 41.0 42 35.25924531100053 38.0 33.0 40.0 26.0 41.0 43 34.895596360365985 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 4.0 14 8.0 15 29.0 16 119.0 17 278.0 18 477.0 19 1022.0 20 2193.0 21 4418.0 22 8343.0 23 14619.0 24 24047.0 25 37123.0 26 55157.0 27 79170.0 28 110178.0 29 146485.0 30 189056.0 31 237614.0 32 294872.0 33 359549.0 34 441950.0 35 539125.0 36 668245.0 37 855923.0 38 1178471.0 39 1251736.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.37669713643274 19.133539295783187 12.364116012180522 26.125647555603553 2 18.800011814995628 22.147086234391665 33.220475510498574 25.832426440114126 3 20.327930741972494 23.611268798227258 29.909799892741994 26.15100056705825 4 14.942046523391383 15.504843379002601 33.98091201305065 35.57219808455537 5 14.703669756103416 37.28783390823748 33.26664322128472 14.741853114374386 6 35.24614728068953 34.75307120657874 15.316418813288301 14.684362699443435 7 28.9893840418177 31.29109287786525 20.830560347705475 18.88896273261157 8 28.468308889522714 32.70752316769879 19.73411952283417 19.090048419944328 9 28.08859831384013 13.069600477768887 18.712768533466743 40.12903267492424 10 17.157942800037045 26.366393475660953 32.25918408224714 24.21647964205486 11 37.36893893031829 21.4669701643669 20.288501270881234 20.875589634433574 12 22.041705088478626 25.169848254226707 28.548137030565456 24.24030962672921 13 30.900536505413513 18.788519885652995 24.324306861281798 25.986636747651694 14 23.280633529911476 20.39983606693564 24.296876995126624 32.02265340802626 15 26.35374773815139 27.23165729620594 21.469447005898576 24.945147959744094 16 25.2580915028336 25.540343748682737 24.152081762231212 25.049482986252453 17 24.598097847240105 25.61426439191079 24.66163421696578 25.126003543883325 18 24.58339063913896 24.350321389418873 26.189568528051538 24.876719443390634 19 25.105019619354067 25.10771183841024 26.051865369355532 23.735403172880154 20 24.755938804476283 24.127128737607716 25.62434098323532 25.49259147468068 21 25.550728022185115 25.038298739087665 25.65304773042857 23.757925508298648 22 25.80453505069218 24.370197658107873 24.777045801876678 25.048221489323275 23 24.250016999440327 24.553868534174413 25.6726470851575 25.523467381227753 24 24.349767561498744 25.309828261038792 25.449977493048692 24.890426684413775 25 25.09900443277714 24.299630750618366 24.88484225288583 25.71652256371867 26 24.54397655215659 25.40960959131499 25.54706660426872 24.499347252259696 27 25.72555303563852 24.822444307218195 24.6502345922765 24.80176806486679 28 24.16486595672081 25.687769664198747 25.455577308685527 24.691787070394913 29 24.38796630387861 25.475084358761112 25.772243806126998 24.36470553123328 30 24.65644977226904 25.7935354128341 25.479853432517764 24.070161382379105 31 25.012868807088505 25.40900961106819 24.906533846424132 24.671587735419173 32 24.15658930613669 25.482253353504973 24.860735354251414 25.500421986106918 33 23.76881745739448 25.053436702237804 25.5872652808046 25.590480559563115 34 24.860212294549072 25.268352703464842 25.750536828479802 24.12089817350629 35 24.80490642308084 25.180478673471367 25.999636319665782 24.01497858378201 36 23.859676004513084 25.709415105410375 25.6890926975635 24.741816192513046 37 24.24730939627526 25.384025818226906 26.043988705602615 24.324676079895216 38 24.05651567779153 24.74980054502821 26.25018191708765 24.943501860092606 39 24.09911427531463 24.60100544382077 26.241520663781227 25.058359617083376 40 24.447918176232353 24.581990685229748 26.761903531176053 24.20818760736185 41 23.291402406136168 24.861719937220528 27.14398325962807 24.70289439701524 42 24.021778359912457 24.84782808689068 27.01174145958887 24.118652093607995 43 23.291987002274077 23.82855395222373 27.08769280519072 25.791766240311475 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 488.0 1 551.0 2 614.0 3 1441.5 4 2269.0 5 2269.0 6 3853.0 7 5437.0 8 5251.0 9 5065.0 10 6941.0 11 8817.0 12 8817.0 13 16855.0 14 24893.0 15 41071.0 16 57249.0 17 50508.5 18 43768.0 19 43768.0 20 46344.5 21 48921.0 22 42313.5 23 35706.0 24 43660.5 25 51615.0 26 51615.0 27 60951.5 28 70288.0 29 79384.5 30 88481.0 31 101791.0 32 115101.0 33 115101.0 34 135095.5 35 155090.0 36 186710.0 37 218330.0 38 251981.0 39 285632.0 40 285632.0 41 317601.5 42 349571.0 43 375050.5 44 400530.0 45 442975.5 46 485421.0 47 485421.0 48 541763.0 49 598105.0 50 606029.5 51 613954.0 52 585371.0 53 556788.0 54 556788.0 55 536929.0 56 517070.0 57 494335.0 58 471600.0 59 438710.5 60 405821.0 61 405821.0 62 344425.5 63 283030.0 64 248913.0 65 214796.0 66 180994.0 67 147192.0 68 147192.0 69 121166.0 70 95140.0 71 79744.5 72 64349.0 73 47914.0 74 31479.0 75 31479.0 76 24799.0 77 18119.0 78 15435.5 79 12752.0 80 10039.0 81 7326.0 82 7326.0 83 5945.5 84 4565.0 85 3820.5 86 3076.0 87 2047.0 88 1018.0 89 1018.0 90 694.5 91 371.0 92 283.5 93 196.0 94 178.5 95 161.0 96 161.0 97 85.5 98 10.0 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6500214.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.129880221526406 #Duplication Level Percentage of deduplicated Percentage of total 1 78.33924750832394 33.787623616785226 2 10.71174060222969 9.239921782764554 3 3.7816016543179267 4.893000791887749 4 1.805435816061663 3.1147292197757324 5 1.1027467322186104 2.378066723763416 6 0.7541179132802496 1.9515009163610764 7 0.5143250010377721 1.5527942982786889 8 0.4034464844910438 1.3920478841515704 9 0.31526399450336606 1.2237568488981125 >10 2.0081028054741785 16.417031804986973 >50 0.1568585488875906 4.640842769090412 >100 0.0864625774754793 7.179023185189182 >500 0.01096830543461665 3.2989764521661282 >1k 0.009324784814905446 7.242557925936638 >5k 2.5009001416855626E-4 0.6919907308418741 >10k+ 1.0718143464366698E-4 0.9961350491227353 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 28520 0.4387547856116737 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18484 0.2843598687673975 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17642 0.2714064490799841 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8939 0.13751854938929703 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 8325 0.12807270652935426 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.5384108892414925E-5 0.0 0.0 0.0 6.15364355696597E-5 7 1.5384108892414925E-5 0.0 0.0 0.0 6.15364355696597E-5 8 1.5384108892414925E-5 0.0 0.0 0.0 7.692054446207463E-5 9 1.5384108892414925E-5 0.0 0.0 0.0 9.230465335448956E-5 10 1.5384108892414925E-5 0.0 0.0 0.0 1.0768876224690449E-4 11 1.5384108892414925E-5 0.0 0.0 0.0 1.0768876224690449E-4 12 1.5384108892414925E-5 1.5384108892414925E-5 0.0 3.076821778482985E-5 1.5384108892414926E-4 13 1.5384108892414925E-5 1.5384108892414925E-5 0.0 3.076821778482985E-5 1.5384108892414926E-4 14 1.5384108892414925E-5 3.076821778482985E-5 0.0 7.692054446207463E-5 1.9999341560139405E-4 15 1.5384108892414925E-5 3.076821778482985E-5 0.0 1.0768876224690449E-4 2.461457422786388E-4 16 3.076821778482985E-5 3.076821778482985E-5 0.0 2.307616333862239E-4 2.6152985117105376E-4 17 4.615232667724478E-5 3.076821778482985E-5 0.0 6.769007912662568E-4 2.6152985117105376E-4 18 4.615232667724478E-5 3.076821778482985E-5 0.0 7.845895535131612E-4 3.076821778482985E-4 19 4.615232667724478E-5 3.076821778482985E-5 0.0 0.001046119404684215 3.230662867407135E-4 20 4.615232667724478E-5 3.076821778482985E-5 0.0 0.0014922585625642478 4.15370940095203E-4 21 4.615232667724478E-5 3.076821778482985E-5 0.0 0.002338384551647069 4.4613915788003285E-4 22 4.615232667724478E-5 3.076821778482985E-5 0.0 0.003953715985350636 4.615232667724478E-4 23 4.615232667724478E-5 3.076821778482985E-5 0.0 0.006138259448073556 4.769073756648627E-4 24 4.615232667724478E-5 4.615232667724478E-5 0.0 0.009199697117664126 4.769073756648627E-4 25 4.615232667724478E-5 4.615232667724478E-5 0.0 0.010415041720164905 5.076755934496926E-4 26 4.615232667724478E-5 4.615232667724478E-5 0.0 0.013153413103014763 5.230597023421075E-4 27 4.615232667724478E-5 4.615232667724478E-5 0.0 0.025429931999161874 5.384438112345225E-4 28 4.615232667724478E-5 4.615232667724478E-5 0.0 0.046598465835124815 5.384438112345225E-4 29 4.615232667724478E-5 4.615232667724478E-5 0.0 0.07402833199030062 5.384438112345225E-4 30 4.615232667724478E-5 4.615232667724478E-5 0.0 0.12081140713213442 5.538279201269373E-4 31 4.615232667724478E-5 4.615232667724478E-5 0.0 0.28111382179109795 5.692120290193523E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2595 0.0 16.183044 37 TCGTTAC 940 0.0 16.138298 23 AAGACGG 2240 0.0 16.104912 5 CGTTACG 690 0.0 15.81884 24 CAAGACG 2370 0.0 15.2215185 4 TATACCG 290 0.0 14.672415 5 TCTAGCG 1380 0.0 14.47826 28 CTAGCGG 1370 0.0 14.3138685 29 TCTTATA 4070 0.0 14.272727 37 GTTACGG 1345 0.0 13.754646 25 TACGGAT 1765 0.0 13.626062 27 ACGGACC 2545 0.0 13.59332 8 GACGGAC 2600 0.0 13.5903845 7 TACTTAC 1090 0.0 13.577982 31 ATCTCGT 1350 0.0 13.566668 20 TCTATAC 550 0.0 13.454546 3 TATACTG 635 0.0 13.401575 5 AGACGGA 2755 0.0 13.362977 6 CGCAATA 1510 0.0 13.354303 36 TAGAGTG 1060 0.0 13.264152 5 >>END_MODULE