##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727266.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4111375 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.136840108236296 31.0 31.0 33.0 30.0 34.0 2 31.383733179289166 31.0 31.0 34.0 30.0 34.0 3 31.53539460642729 31.0 31.0 34.0 30.0 34.0 4 35.358960201878936 37.0 35.0 37.0 33.0 37.0 5 35.160736979720895 37.0 35.0 37.0 32.0 37.0 6 35.15948849229272 37.0 35.0 37.0 32.0 37.0 7 35.060328722142835 37.0 35.0 37.0 32.0 37.0 8 35.062911799580434 37.0 35.0 37.0 32.0 37.0 9 36.62919363959746 39.0 35.0 39.0 32.0 39.0 10 36.3607338177617 38.0 35.0 39.0 32.0 39.0 11 36.51226244261348 38.0 35.0 39.0 32.0 39.0 12 36.36082551457846 38.0 35.0 39.0 32.0 39.0 13 36.425910309811194 38.0 35.0 39.0 32.0 39.0 14 37.44390964093521 39.0 36.0 41.0 32.0 41.0 15 37.44580365449515 39.0 36.0 41.0 32.0 41.0 16 37.39760347815512 39.0 36.0 41.0 32.0 41.0 17 37.350319053844515 39.0 36.0 41.0 32.0 41.0 18 37.27600085129671 39.0 36.0 41.0 31.0 41.0 19 37.28294816211122 39.0 36.0 41.0 31.0 41.0 20 37.18090930649722 39.0 36.0 40.0 31.0 41.0 21 37.06870913015719 39.0 36.0 40.0 31.0 41.0 22 36.99108424797057 39.0 36.0 40.0 31.0 41.0 23 36.88142361132225 39.0 36.0 40.0 30.0 41.0 24 36.73761551792283 39.0 35.0 40.0 30.0 41.0 25 36.60563558420237 38.0 35.0 40.0 30.0 41.0 26 36.37580128302575 38.0 35.0 40.0 30.0 41.0 27 36.19831564865769 38.0 35.0 40.0 29.0 41.0 28 35.976106047246965 38.0 34.0 40.0 28.0 41.0 29 35.91927834361984 38.0 34.0 40.0 28.0 41.0 30 35.83987789972941 38.0 34.0 40.0 28.0 41.0 31 36.000714116323614 38.0 34.0 40.0 29.0 41.0 32 35.99452591894439 38.0 35.0 40.0 29.0 41.0 33 35.98974965796114 38.0 35.0 40.0 29.0 41.0 34 36.0425949955915 38.0 35.0 40.0 29.0 41.0 35 35.82766884558086 38.0 34.0 40.0 27.0 41.0 36 35.795247818552184 38.0 34.0 40.0 27.0 41.0 37 35.71957216259767 38.0 34.0 40.0 27.0 41.0 38 35.621259311057734 38.0 34.0 40.0 27.0 41.0 39 35.554161807181295 38.0 34.0 40.0 27.0 41.0 40 35.361427989419596 38.0 34.0 40.0 26.0 41.0 41 35.29626609102794 38.0 34.0 40.0 26.0 41.0 42 35.08503408227175 38.0 33.0 40.0 25.0 41.0 43 34.735089355750816 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 11.0 15 24.0 16 116.0 17 197.0 18 378.0 19 763.0 20 1659.0 21 3135.0 22 5880.0 23 10161.0 24 16735.0 25 25982.0 26 38372.0 27 53909.0 28 74437.0 29 98740.0 30 126513.0 31 157320.0 32 192592.0 33 233247.0 34 284495.0 35 343969.0 36 422663.0 37 537330.0 38 736641.0 39 746101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.68009485877596 19.716712778571647 12.621081754887356 25.98211060776504 2 19.034872761545714 22.213347116232406 33.331598309567966 25.42018181265392 3 20.271977136602718 23.755653522240127 29.943850901462405 26.028518439694746 4 15.033316104709495 15.777349426894896 34.34077407193457 34.84856039646104 5 14.77602991699857 37.1574716487793 33.35395092882551 14.712547505396614 6 34.98343011766137 35.3420206135417 15.267665926849288 14.406883341947646 7 28.961259919126814 31.358584415189565 20.984196284697944 18.69595938098568 8 27.851460885956648 33.20015809795993 19.745754157672312 19.202626858411115 9 27.727293180505306 13.35776960262686 19.148897874798575 39.76603934206926 10 16.982299109178804 26.330120701711714 32.609820315587854 24.077759873521632 11 37.167371013347115 21.58316864795841 20.752619257547657 20.49684108114682 12 21.76354625885501 25.187923748137784 28.96186798820346 24.086662004803745 13 30.41612599191268 19.051728436350366 24.692469064485724 25.839676507251223 14 23.013882217019855 20.717740415311177 24.50421087835578 31.764166489313183 15 25.750290352984102 27.703359581648474 21.67895168891186 24.867398376455565 16 25.159903925085892 25.92628986652884 24.05158858046274 24.86221762792253 17 24.259888723358973 25.902794077407194 24.888170016113833 24.94914718312 18 24.347864157368278 24.651582499771973 26.336201392478188 24.664351950381562 19 24.802286339728195 25.22214587577149 26.260387340001824 23.715180444498497 20 24.564604299048373 24.483731111854308 25.72263537137819 25.229029217719134 21 25.440539965340065 25.252841202760635 25.80051685871515 23.506101973184155 22 25.532504332492174 24.56713386640722 25.236569274269556 24.66379252683105 23 24.134358943175947 24.727323583959137 25.90145632543857 25.23686114742635 24 24.239603538962026 25.334711623240402 25.77682648748898 24.648858350308593 25 24.904612203946368 24.518342403697062 25.342592198473746 25.23445319388283 26 24.337989115563527 25.713781885622204 25.75936274360767 24.18886625520659 27 25.42672463591864 25.12242254720136 25.09822139795081 24.352631418929192 28 24.10916056063969 25.72582165333982 25.71446292298805 24.45055486303244 29 24.18154510352376 25.742920555775132 26.00820893253474 24.06732540816637 30 24.456562585509715 25.79703870359673 25.739247818552187 24.007150892341368 31 24.671843361405855 25.620795962421333 25.282685233042475 24.42467544313034 32 24.14547444589705 25.504557477729474 25.14932352315223 25.200644553221245 33 23.65155209631814 25.079565838679272 25.810708096439754 25.458173968562832 34 24.814131525341278 25.278720622662735 26.040631175701563 23.866516676294427 35 24.91570338390441 25.069082727797877 26.11678574686084 23.898428141436867 36 23.646614575415768 25.75046061232556 26.043744489373992 24.55918032288468 37 24.14413669392843 25.2838040801435 26.362397008300142 24.209662217627923 38 23.777300781368762 24.66413304551397 26.6932352315223 24.865330941594966 39 23.97086132984707 24.573044297832233 26.686084339180933 24.770010033139762 40 24.183296342464505 24.51926666869356 27.183801039798123 24.11363594904381 41 23.035383539570095 24.870730594995592 27.63335866954486 24.460527195889455 42 23.827527287099816 24.81996898847709 27.44291143473899 23.90959228968411 43 23.003763947584446 24.029090024626797 27.425496336383816 25.541649691404945 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 622.0 1 693.5 2 765.0 3 1392.5 4 2020.0 5 2020.0 6 3081.0 7 4142.0 8 3991.0 9 3840.0 10 5367.0 11 6894.0 12 6894.0 13 12585.0 14 18276.0 15 27218.5 16 36161.0 17 32202.0 18 28243.0 19 28243.0 20 30603.0 21 32963.0 22 29265.0 23 25567.0 24 30542.0 25 35517.0 26 35517.0 27 42140.0 28 48763.0 29 55209.0 30 61655.0 31 70407.5 32 79160.0 33 79160.0 34 93444.0 35 107728.0 36 129121.5 37 150515.0 38 171686.0 39 192857.0 40 192857.0 41 212381.5 42 231906.0 43 246472.0 44 261038.0 45 284123.0 46 307208.0 47 307208.0 48 331427.0 49 355646.0 50 359804.0 51 363962.0 52 355213.5 53 346465.0 54 346465.0 55 334220.0 56 321975.0 57 307821.5 58 293668.0 59 272914.5 60 252161.0 61 252161.0 62 212558.0 63 172955.0 64 151681.5 65 130408.0 66 110060.5 67 89713.0 68 89713.0 69 73910.0 70 58107.0 71 49220.5 72 40334.0 73 29988.5 74 19643.0 75 19643.0 76 15189.0 77 10735.0 78 9422.5 79 8110.0 80 6506.5 81 4903.0 82 4903.0 83 4002.5 84 3102.0 85 2708.0 86 2314.0 87 1536.5 88 759.0 89 759.0 90 524.0 91 289.0 92 219.5 93 150.0 94 137.5 95 125.0 96 125.0 97 66.0 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4111375.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.21852286784417 #Duplication Level Percentage of deduplicated Percentage of total 1 82.30872676958548 41.33422677501566 2 8.878713445103651 8.917517483599463 3 3.118766642242017 4.698595618287008 4 1.5063382944013424 3.0258433633641277 5 0.9079070467461753 2.2796875394449834 6 0.5999174326593727 1.8076180386493845 7 0.41633633573552226 1.4635457057794141 8 0.33280778654316123 1.3370492351291474 9 0.246829474836673 1.1155870463889086 >10 1.5024878237334858 13.806633712715788 >50 0.09902338823080073 3.42522122207093 >100 0.06449039556958346 6.517097683341133 >500 0.01125274233269266 3.9651964923575838 >1k 0.00615990628449592 5.0626763926976315 >5k 9.700639818103801E-5 0.2939230400614021 >10k+ 1.45509597271557E-4 0.9495806510975189 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16678 0.40565504241281813 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11407 0.27744975829254204 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10900 0.26511811741813873 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6193 0.15063087166702135 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5874 0.14287191024900428 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4322763065884285E-5 2 0.0 0.0 0.0 0.0 2.4322763065884285E-5 3 0.0 0.0 0.0 0.0 2.4322763065884285E-5 4 0.0 0.0 0.0 0.0 2.4322763065884285E-5 5 0.0 2.4322763065884285E-5 0.0 0.0 2.4322763065884285E-5 6 0.0 2.4322763065884285E-5 0.0 0.0 4.864552613176857E-5 7 0.0 2.4322763065884285E-5 0.0 0.0 4.864552613176857E-5 8 0.0 2.4322763065884285E-5 0.0 0.0 4.864552613176857E-5 9 0.0 2.4322763065884285E-5 0.0 2.4322763065884285E-5 7.296828919765286E-5 10 0.0 2.4322763065884285E-5 0.0 2.4322763065884285E-5 7.296828919765286E-5 11 0.0 2.4322763065884285E-5 0.0 2.4322763065884285E-5 7.296828919765286E-5 12 0.0 2.4322763065884285E-5 0.0 2.4322763065884285E-5 9.729105226353714E-5 13 0.0 2.4322763065884285E-5 0.0 2.4322763065884285E-5 9.729105226353714E-5 14 0.0 2.4322763065884285E-5 0.0 7.296828919765286E-5 9.729105226353714E-5 15 0.0 2.4322763065884285E-5 0.0 1.7025934146119E-4 1.2161381532942143E-4 16 0.0 2.4322763065884285E-5 0.0 6.080690766471071E-4 1.459365783953057E-4 17 0.0 2.4322763065884285E-5 0.0 8.756194703718343E-4 1.459365783953057E-4 18 0.0 2.4322763065884285E-5 0.0 9.485877595694871E-4 1.7025934146119E-4 19 0.0 2.4322763065884285E-5 0.0 0.0010458788118330243 1.7025934146119E-4 20 0.0 2.4322763065884285E-5 0.0 0.0013134292055577514 1.7025934146119E-4 21 0.0 2.4322763065884285E-5 0.0 0.0017512389407436685 1.9458210452707428E-4 22 0.0 2.4322763065884285E-5 0.0 0.0031133136724331885 2.1890486759295857E-4 23 0.0 2.4322763065884285E-5 0.0 0.004645647745583899 3.4051868292238E-4 24 0.0 2.4322763065884285E-5 0.0 0.006931987473777021 3.4051868292238E-4 25 0.0 2.4322763065884285E-5 0.0 0.007977866285610046 3.8916420905414856E-4 26 0.0 2.4322763065884285E-5 0.0 0.011188471010306771 3.8916420905414856E-4 27 0.0 2.4322763065884285E-5 0.0 0.026098324769693836 4.134869721200328E-4 28 0.0 2.4322763065884285E-5 0.0 0.05134535283208173 4.134869721200328E-4 29 0.0 2.4322763065884285E-5 0.0 0.0889726672950047 4.134869721200328E-4 30 0.0 2.4322763065884285E-5 0.0 0.14773646286218114 4.3780973518591713E-4 31 0.0 2.4322763065884285E-5 0.0 0.34596698184913804 4.621324982518014E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1355 0.0 19.114391 5 CAAGACG 1520 0.0 18.134869 4 CGCTTCG 950 0.0 15.968421 32 GTAAACG 1025 0.0 15.160976 27 CTTATAC 1935 0.0 15.105944 37 TAAACGC 1055 0.0 15.080569 28 GACGGAC 1690 0.0 14.778108 7 ACGGACC 1725 0.0 14.585506 8 CGCAAGA 1815 0.0 14.3719015 2 AGACGGA 1830 0.0 14.153006 6 CACTCTA 1145 0.0 13.895197 9 GCGCAAG 1830 0.0 13.849728 1 CGGACCA 1875 0.0 13.813333 9 TCTTATA 3055 0.0 13.746318 37 ACGTTAC 95 0.001246029 13.631579 31 TTCGGGC 1140 0.0 13.631579 35 AAACGCT 1220 0.0 13.495902 29 TCTAGCG 855 0.0 13.415205 28 CTAGCGG 900 0.0 13.361112 29 AACGCTT 1145 0.0 13.248909 30 >>END_MODULE