##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727265.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4612114 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.214190932834704 31.0 31.0 34.0 30.0 34.0 2 31.464101277635375 31.0 31.0 34.0 30.0 34.0 3 31.621922181455187 31.0 31.0 34.0 30.0 34.0 4 35.43141691640753 37.0 35.0 37.0 33.0 37.0 5 35.24980930653492 37.0 35.0 37.0 33.0 37.0 6 35.24963975305034 37.0 35.0 37.0 32.0 37.0 7 35.15619973834124 37.0 35.0 37.0 32.0 37.0 8 35.15781374874949 37.0 35.0 37.0 32.0 37.0 9 36.734613888555224 39.0 35.0 39.0 32.0 39.0 10 36.472430646770654 38.0 35.0 39.0 32.0 39.0 11 36.61859962698233 39.0 35.0 39.0 32.0 39.0 12 36.475390027219625 38.0 35.0 39.0 32.0 39.0 13 36.53782690540607 38.0 35.0 39.0 32.0 39.0 14 37.57338933946559 39.0 36.0 41.0 32.0 41.0 15 37.57966628752021 39.0 36.0 41.0 32.0 41.0 16 37.52868727876197 39.0 36.0 41.0 32.0 41.0 17 37.485636738380705 39.0 36.0 41.0 32.0 41.0 18 37.413638518041836 39.0 36.0 41.0 32.0 41.0 19 37.424721938789894 39.0 36.0 41.0 32.0 41.0 20 37.32870154553855 39.0 36.0 41.0 31.0 41.0 21 37.21916262260647 39.0 36.0 40.0 31.0 41.0 22 37.13895840389028 39.0 36.0 40.0 31.0 41.0 23 37.0223040887541 39.0 36.0 40.0 31.0 41.0 24 36.87897133505373 39.0 36.0 40.0 30.0 41.0 25 36.74851727429114 39.0 35.0 40.0 30.0 41.0 26 36.530842472670884 38.0 35.0 40.0 30.0 41.0 27 36.35983022102229 38.0 35.0 40.0 30.0 41.0 28 36.12785546931407 38.0 35.0 40.0 29.0 41.0 29 36.06375579614901 38.0 35.0 40.0 29.0 41.0 30 35.98113207956265 38.0 34.0 40.0 29.0 41.0 31 36.1352991274717 38.0 35.0 40.0 30.0 41.0 32 36.12947793571451 38.0 35.0 40.0 29.0 41.0 33 36.12018913669523 38.0 35.0 40.0 29.0 41.0 34 36.171714532641644 38.0 35.0 40.0 29.0 41.0 35 35.95572659305473 38.0 35.0 40.0 28.0 41.0 36 35.923301115280324 38.0 35.0 40.0 28.0 41.0 37 35.85325579549855 38.0 34.0 40.0 28.0 41.0 38 35.75828437892038 38.0 34.0 40.0 27.0 41.0 39 35.68862131335002 38.0 34.0 40.0 27.0 41.0 40 35.49699812276973 38.0 34.0 40.0 26.0 41.0 41 35.43292728670627 38.0 34.0 40.0 26.0 41.0 42 35.2312085087229 38.0 34.0 40.0 26.0 41.0 43 34.87526284042415 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 3.0 14 7.0 15 33.0 16 113.0 17 195.0 18 421.0 19 802.0 20 1668.0 21 3241.0 22 6126.0 23 10429.0 24 17262.0 25 26830.0 26 39102.0 27 56331.0 28 78110.0 29 104041.0 30 134462.0 31 168786.0 32 207884.0 33 253739.0 34 313746.0 35 381573.0 36 473895.0 37 605764.0 38 834653.0 39 892895.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.65285159907149 19.503160589699213 12.782771631403733 26.061216179825564 2 18.707104811372833 21.944275445056217 34.13144167728725 25.2171780662837 3 20.136622815481147 23.69824336519002 29.959623721356408 26.20551009797243 4 14.913616619190245 15.715634956117736 34.27911799231328 35.09163043237873 5 14.741049332258482 37.21274018812198 33.262382499652006 14.783827979967537 6 34.90982660012307 35.11251022849826 15.44239799796796 14.53526517341072 7 28.806768436339603 31.48712282480442 21.103944958862684 18.602163779993298 8 27.504068633169084 33.61358804227302 19.875137518283374 19.00720580627452 9 27.82543970075328 13.552635515947783 19.253166769078128 39.36875801422081 10 17.059877531214536 26.288530595731157 32.41006185016242 24.241530022891887 11 37.093619108287434 21.597579764940765 20.78372303893616 20.525078087835645 12 21.71262462289527 25.12305636851127 29.031220824116666 24.133098184476793 13 30.24094807717242 19.07949369855125 24.876336534612978 25.803221689663353 14 22.96421987834646 20.856964940589066 24.551387931868117 31.627427249196355 15 25.822843927968826 27.713408645146238 21.7879913636133 24.675756063271635 16 24.968159937070073 25.96147883595245 24.380837073845097 24.689524153132382 17 24.228282301781785 25.902286890566884 24.889562573691805 24.97986823395952 18 24.310370472195615 24.72690397505352 26.490195168636333 24.47253038411453 19 24.842382473633563 25.305380569517578 26.257243424598787 23.59499353225007 20 24.463402248947013 24.354883682406808 25.825727638128633 25.355986430517547 21 25.482826313486612 25.30093575310584 25.996885593027407 23.21935234038014 22 25.483368364268532 24.39200331995263 25.38796742665077 24.736660889128064 23 23.932040708447364 24.707606967217203 26.20121705577963 25.15913526855581 24 24.01807500855356 25.277866071827365 26.06644154936326 24.63761737025581 25 24.82158940563915 24.473419347396877 25.47280921503675 25.232182031927223 26 24.14109885401792 25.683840425453493 26.064772032954952 24.11028868757364 27 25.556068215139522 25.067029999692114 25.207291060021497 24.169610725146864 28 23.963457971767394 25.82468690062735 25.832991118606348 24.37886400899891 29 24.01172217338947 25.792250581837312 26.26491886367076 23.93110838110246 30 24.52144504667491 25.820480586559658 25.83537614204679 23.822698224718643 31 24.607414300687278 25.58197824251525 25.477687672074023 24.332919784723448 32 24.08541939769919 25.453945847825963 25.199745713137183 25.26088904133766 33 23.56411831971196 24.855500102556007 26.034894193855575 25.54548738387646 34 24.84227406347718 25.154994000581947 26.31038608325813 23.692345852682738 35 24.832018462683273 24.83505394706202 26.406589256033136 23.926338334221576 36 23.45143680316662 25.54234348934133 26.458105762346722 24.548113945145328 37 23.908645796699734 25.11692035365995 26.754390719743704 24.220043129896617 38 23.732847887107734 24.29068318779631 27.024960788046435 24.95150813704952 39 23.753077222288955 24.234678501008432 27.183521482773408 24.828722793929206 40 24.165491139204278 24.1583794329455 27.640405245837375 24.035724182012846 41 22.722833824142246 24.76142176884613 28.165934319923576 24.34981008708805 42 23.606615101014416 24.712940746911286 27.87706461722325 23.803379534851047 43 22.57112465129873 23.955890942851806 27.771950129593503 25.701034276255964 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1261.0 1 1332.0 2 1403.0 3 2397.0 4 3391.0 5 3391.0 6 4813.0 7 6235.0 8 5834.5 9 5434.0 10 7479.0 11 9524.0 12 9524.0 13 16072.5 14 22621.0 15 32280.0 16 41939.0 17 37863.0 18 33787.0 19 33787.0 20 36139.5 21 38492.0 22 33815.5 23 29139.0 24 34841.5 25 40544.0 26 40544.0 27 47191.5 28 53839.0 29 61115.0 30 68391.0 31 77973.5 32 87556.0 33 87556.0 34 103403.5 35 119251.0 36 143818.5 37 168386.0 38 191825.5 39 215265.0 40 215265.0 41 237053.5 42 258842.0 43 274785.5 44 290729.0 45 319633.5 46 348538.0 47 348538.0 48 377284.5 49 406031.0 50 409977.0 51 413923.0 52 401811.0 53 389699.0 54 389699.0 55 372598.0 56 355497.0 57 340666.5 58 325836.0 59 301514.0 60 277192.0 61 277192.0 62 232497.0 63 187802.0 64 166049.0 65 144296.0 66 121942.0 67 99588.0 68 99588.0 69 82233.5 70 64879.0 71 55177.0 72 45475.0 73 33570.5 74 21666.0 75 21666.0 76 17019.5 77 12373.0 78 10802.0 79 9231.0 80 7519.0 81 5807.0 82 5807.0 83 4772.5 84 3738.0 85 3329.0 86 2920.0 87 1910.0 88 900.0 89 900.0 90 629.5 91 359.0 92 259.5 93 160.0 94 159.5 95 159.0 96 159.0 97 84.5 98 10.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4612114.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.96467743037247 #Duplication Level Percentage of deduplicated Percentage of total 1 81.82956306021312 40.06758159511658 2 9.284641746344011 9.092389763326093 3 3.135543064608279 4.605925641827578 4 1.5341216909733864 3.004710949497977 5 0.9531190745656389 2.3334584019420817 6 0.6207281988664828 1.8236253617660052 7 0.4434688725069972 1.5200017204901264 8 0.3392252910692134 1.3288045562742594 9 0.2358957132266068 1.0395501754813605 >10 1.4430106900122275 12.859659452295357 >50 0.09457834702423286 3.2003542913106426 >100 0.06619139088744952 6.725680561469677 >500 0.01090994124989086 3.745058258896103 >1k 0.008781171692619856 7.340995716033101 >5k 8.869870396585521E-5 0.3076220158180035 >10k+ 1.3304805594878283E-4 1.004581538455221 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18992 0.41178513800829725 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13867 0.300664727714883 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13402 0.2905825831711879 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7738 0.16777555801959795 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6428 0.13937209704703743 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 4.3364062553527516E-5 5 0.0 0.0 0.0 0.0 4.3364062553527516E-5 6 0.0 0.0 0.0 0.0 6.504609383029127E-5 7 0.0 0.0 0.0 0.0 6.504609383029127E-5 8 0.0 0.0 0.0 0.0 8.672812510705503E-5 9 0.0 0.0 0.0 0.0 8.672812510705503E-5 10 0.0 0.0 0.0 0.0 8.672812510705503E-5 11 0.0 0.0 0.0 2.1682031276763758E-5 8.672812510705503E-5 12 0.0 0.0 0.0 4.3364062553527516E-5 1.0841015638381879E-4 13 0.0 0.0 0.0 8.672812510705503E-5 1.0841015638381879E-4 14 0.0 0.0 0.0 8.672812510705503E-5 1.517742189373463E-4 15 0.0 0.0 0.0 1.9513828149087382E-4 2.3850234404440134E-4 16 2.1682031276763758E-5 0.0 0.0 4.3364062553527516E-4 2.8186640659792886E-4 17 2.1682031276763758E-5 0.0 0.0 8.239171885170228E-4 2.8186640659792886E-4 18 2.1682031276763758E-5 0.0 0.0 9.756914074543691E-4 3.252304691514564E-4 19 2.1682031276763758E-5 0.0 0.0 0.0012141937514987705 3.252304691514564E-4 20 2.1682031276763758E-5 0.0 0.0 0.001431014064266408 3.4691250042822013E-4 21 2.1682031276763758E-5 0.0 0.0 0.002146521096399612 4.119585942585114E-4 22 2.1682031276763758E-5 0.0 0.0 0.0033390328166216184 4.119585942585114E-4 23 2.1682031276763758E-5 0.0 0.0 0.005160323443869774 4.770046880888027E-4 24 2.1682031276763758E-5 0.0 0.0 0.0078055312596349525 4.770046880888027E-4 25 2.1682031276763758E-5 0.0 0.0 0.008932996886026667 4.986867193655664E-4 26 2.1682031276763758E-5 0.0 0.0 0.012944172672227963 4.986867193655664E-4 27 2.1682031276763758E-5 0.0 0.0 0.030983622694495408 5.203687506423302E-4 28 2.1682031276763758E-5 0.0 0.0 0.06743111727073528 5.420507819190939E-4 29 2.1682031276763758E-5 0.0 0.0 0.11814538842708572 5.420507819190939E-4 30 2.1682031276763758E-5 0.0 0.0 0.20027692290346683 5.420507819190939E-4 31 2.1682031276763758E-5 0.0 0.0 0.49482731779830247 5.420507819190939E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 85 1.2469736E-6 19.588236 3 CTTATAC 2830 0.0 18.892225 37 AAGACGG 1430 0.0 17.594406 5 CAAGACG 1465 0.0 16.921501 4 AGCGTTA 85 5.368504E-4 15.235294 10 GACGGAC 1735 0.0 14.608069 7 TATACTG 415 0.0 14.26506 5 ACGGACC 1770 0.0 14.110169 8 TCTTATA 4560 0.0 13.95614 37 GCGCAAG 1870 0.0 13.949197 1 TTCGCGA 80 0.0063024154 13.875001 22 TCGTTAC 820 0.0 13.762196 23 CGCAAGA 1875 0.0 13.615999 2 AGACGGA 1850 0.0 13.6 6 GTAAACG 1200 0.0 13.566668 27 ACCGTCG 1330 0.0 13.492481 8 TACCGTC 1320 0.0 13.454544 7 TCTAGCG 1110 0.0 13.333333 28 CTAGCGG 1075 0.0 13.251163 29 CGGACCA 1890 0.0 13.214286 9 >>END_MODULE