##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727264.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7387323 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.554925647626344 31.0 31.0 34.0 30.0 34.0 2 31.77262399383376 31.0 31.0 34.0 30.0 34.0 3 31.948182988614413 31.0 31.0 34.0 30.0 34.0 4 35.657885407203665 37.0 35.0 37.0 35.0 37.0 5 35.45636098489263 37.0 35.0 37.0 33.0 37.0 6 35.46617969730036 37.0 35.0 37.0 33.0 37.0 7 35.36807284587394 37.0 35.0 37.0 33.0 37.0 8 35.32743430874757 37.0 35.0 37.0 33.0 37.0 9 36.875167905884176 39.0 37.0 39.0 33.0 39.0 10 36.66338888931755 39.0 35.0 39.0 32.0 39.0 11 36.73048017529489 39.0 35.0 39.0 32.0 39.0 12 36.564851570724606 38.0 35.0 39.0 32.0 39.0 13 36.55663993573856 38.0 35.0 39.0 32.0 39.0 14 37.55790074428856 39.0 36.0 41.0 32.0 41.0 15 37.48192883944563 39.0 36.0 41.0 32.0 41.0 16 37.41003486648682 39.0 36.0 41.0 32.0 41.0 17 37.72642308993393 39.0 37.0 41.0 32.0 41.0 18 37.75143066033528 39.0 37.0 41.0 32.0 41.0 19 37.847124188288504 40.0 37.0 41.0 32.0 41.0 20 37.813593638724065 40.0 37.0 41.0 32.0 41.0 21 37.770992821080114 40.0 37.0 41.0 32.0 41.0 22 37.712853627762044 40.0 37.0 41.0 32.0 41.0 23 37.604355867477295 40.0 37.0 41.0 32.0 41.0 24 37.499248374546504 39.0 37.0 41.0 32.0 41.0 25 37.42292695202308 39.0 36.0 41.0 31.0 41.0 26 37.148711515660004 39.0 36.0 41.0 31.0 41.0 27 36.969493143862806 39.0 36.0 41.0 30.0 41.0 28 36.79508544570205 39.0 36.0 41.0 30.0 41.0 29 36.63803884032146 39.0 36.0 40.0 30.0 41.0 30 36.49880044503266 39.0 36.0 40.0 30.0 41.0 31 36.34378556345783 39.0 35.0 40.0 29.0 41.0 32 36.212726315067044 39.0 35.0 40.0 29.0 41.0 33 36.044168232524825 39.0 35.0 40.0 28.0 41.0 34 35.92060182017221 38.0 35.0 40.0 27.0 41.0 35 35.76837793609403 38.0 35.0 40.0 27.0 41.0 36 35.686016436535944 38.0 35.0 40.0 26.0 41.0 37 35.61594639898648 38.0 35.0 40.0 26.0 41.0 38 35.516063396713534 38.0 34.0 40.0 26.0 41.0 39 35.38178403732989 38.0 34.0 40.0 25.0 41.0 40 35.2973106766822 38.0 34.0 40.0 25.0 41.0 41 35.10157860973454 38.0 34.0 40.0 24.0 41.0 42 34.93115354506632 38.0 34.0 40.0 24.0 41.0 43 34.64303537289489 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 10.0 11 21.0 12 44.0 13 41.0 14 75.0 15 148.0 16 296.0 17 553.0 18 999.0 19 2144.0 20 4176.0 21 7906.0 22 14091.0 23 23069.0 24 34889.0 25 49821.0 26 68284.0 27 89972.0 28 118055.0 29 149920.0 30 189050.0 31 236206.0 32 292439.0 33 358185.0 34 445537.0 35 555689.0 36 712635.0 37 947402.0 38 1464685.0 39 1620977.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.93274695041763 21.005119175105786 12.765273699281865 26.29686017519472 2 19.022939703597636 22.660536164453617 34.22456280847609 24.091961323472656 3 18.738357589075232 25.09241845794478 30.226159056535096 25.943064896444895 4 14.636750010795522 16.57808924829739 34.82518633610579 33.95997440480131 5 13.1428935759273 38.68854793542938 34.687951237545725 13.48060725109759 6 34.15885565041626 37.8511810029154 14.728718373353919 13.26124497331442 7 28.566721666292377 31.808816265377864 21.35274171712811 18.271720351201644 8 26.70315078953499 36.320951446146324 19.082826079217057 17.893071685101628 9 27.37597909283241 14.339849496224815 18.28803207873813 39.99613933220464 10 15.73296578476398 27.795481529642064 34.034886521138986 22.436666164454973 11 36.86497801707059 22.359209147887537 21.016192198445903 19.75962063659596 12 21.132377723297058 25.60045093466199 30.232737894363087 23.034433447677866 13 30.113669051698427 20.639370987298104 24.616021256956007 24.630938704047463 14 22.282699700554584 20.76906614209234 25.00299499561614 31.94523916173694 15 24.67186015827384 28.810016835597956 21.733935283457892 24.78418772267031 16 24.604772256472337 27.03707418776734 23.82637120374999 24.531782352010328 17 23.709671284171545 27.09464578711395 24.93689527315917 24.258787655555334 18 24.05439697167702 26.348259037813833 25.596349313547005 24.000994676962144 19 24.724355493864287 26.138940993916197 25.6056490287483 23.531054483471213 20 24.486678056448866 25.68316019212914 25.477713645389542 24.35244810603246 21 24.65725405535943 25.996237067202827 25.542067133114394 23.80444174432335 22 24.857719095266308 25.489355210270354 25.272050511396348 24.38087518306699 23 24.30498842408813 25.65642520301332 25.396168544410475 24.64241782848807 24 24.337923223338144 25.790641616726383 25.35037387697817 24.521061282957305 25 24.715082852069685 25.412020024033062 25.30055880865098 24.572338315246267 26 24.544303802608873 25.806168215468578 25.39033422526672 24.25919375665583 27 24.83501804374873 25.92993429419561 24.955440556748364 24.279607105307292 28 24.512966334354136 25.947532008550322 25.190925048221118 24.34857660887442 29 24.510069479837284 26.035128015926745 25.35718283876311 24.097619665472862 30 24.721363882423987 25.957129531225316 25.11149167296462 24.21001491338608 31 24.687143096355744 25.501240435811457 25.432839473785023 24.378776994047776 32 24.313787281265487 25.888038197328044 25.155621325884898 24.64255319552157 33 24.283817020049074 25.52453710227643 25.36332850208391 24.82831737559059 34 24.682797814580464 25.549742443913715 25.707837602335786 24.059622139170035 35 24.70436178301666 25.50795464067295 25.516645204223504 24.271038372086885 36 24.390337338708488 25.575164372804597 25.66890604350182 24.36559224498509 37 24.46435603262508 25.227284633418627 25.87649138937068 24.43186794458561 38 24.336461259376367 25.052133228775837 25.95254058878974 24.658864923058054 39 24.242895565822696 25.17584516068947 26.078973398076677 24.50228587541116 40 24.448084915198645 24.875885351161713 26.29040316769688 24.385626565942765 41 23.824746799348016 25.082712641642992 26.55199995993136 24.540540599077637 42 24.003905068182345 25.116838670787782 26.461317584191193 24.417938676838688 43 23.722734202904082 24.605773972520222 26.551566785424164 25.119925039151532 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 678.0 1 743.5 2 809.0 3 918.5 4 1028.0 5 1028.0 6 1425.5 7 1823.0 8 2283.0 9 2743.0 10 4004.0 11 5265.0 12 5265.0 13 9332.0 14 13399.0 15 19743.0 16 26087.0 17 26677.5 18 27268.0 19 27268.0 20 33912.0 21 40556.0 22 43970.0 23 47384.0 24 59084.5 25 70785.0 26 70785.0 27 87479.5 28 104174.0 29 121153.5 30 138133.0 31 161521.0 32 184909.0 33 184909.0 34 215422.0 35 245935.0 36 284021.0 37 322107.0 38 358646.0 39 395185.0 40 395185.0 41 428472.5 42 461760.0 43 493472.5 44 525185.0 45 558010.0 46 590835.0 47 590835.0 48 619332.5 49 647830.0 50 650927.5 51 654025.0 52 636929.0 53 619833.0 54 619833.0 55 591592.0 56 563351.0 57 523151.0 58 482951.0 59 438063.5 60 393176.0 61 393176.0 62 338498.0 63 283820.0 64 240459.5 65 197099.0 66 163882.5 67 130666.0 68 130666.0 69 105463.5 70 80261.0 71 66022.0 72 51783.0 73 41524.0 74 31265.0 75 31265.0 76 24523.0 77 17781.0 78 14595.0 79 11409.0 80 8897.0 81 6385.0 82 6385.0 83 5117.0 84 3849.0 85 3096.5 86 2344.0 87 2005.5 88 1667.0 89 1667.0 90 1218.5 91 770.0 92 594.5 93 419.0 94 417.5 95 416.0 96 416.0 97 244.0 98 72.0 99 87.5 100 103.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7387323.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.84621728883767 #Duplication Level Percentage of deduplicated Percentage of total 1 80.58993305005251 44.2005297935606 2 9.80998211299059 10.760808211373856 3 3.5419847520579215 5.827933960353557 4 1.722368925959099 3.7786168145877883 5 0.9899420945874923 2.7147289611556347 6 0.6384920316215167 2.101132362210307 7 0.46300774344544005 1.7775956312396104 8 0.3193825285892922 1.4013538849013385 9 0.2521042747254149 1.2444269247931437 >10 1.5133310460776614 15.514840076207603 >50 0.10980439313795214 4.124503406210005 >100 0.04607210247653622 4.412610110795356 >500 0.0026777051247601964 0.9800360009149477 >1k 8.42868412979401E-4 0.7640288486193382 >5k 4.9580493917143184E-5 0.24383985900099733 >10k+ 2.4790246958571592E-5 0.15301515407590188 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11254 0.1523420594984137 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9675 0.13096760490911252 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8259 0.11179963296582539 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.082936267982326E-4 2 0.0 0.0 0.0 0.0 1.082936267982326E-4 3 0.0 0.0 0.0 0.0 1.082936267982326E-4 4 0.0 0.0 0.0 0.0 1.2183033014801166E-4 5 0.0 0.0 0.0 0.0 1.2183033014801166E-4 6 2.707340669955815E-5 0.0 0.0 0.0 1.3536703349779073E-4 7 2.707340669955815E-5 0.0 0.0 0.0 1.489037368475698E-4 8 2.707340669955815E-5 0.0 0.0 0.0 1.489037368475698E-4 9 2.707340669955815E-5 0.0 0.0 2.707340669955815E-5 2.3012395694624427E-4 10 2.707340669955815E-5 0.0 0.0 2.707340669955815E-5 2.3012395694624427E-4 11 2.707340669955815E-5 0.0 0.0 4.061011004933722E-5 2.3012395694624427E-4 12 2.707340669955815E-5 0.0 0.0 4.061011004933722E-5 2.3012395694624427E-4 13 2.707340669955815E-5 0.0 0.0 4.061011004933722E-5 2.3012395694624427E-4 14 2.707340669955815E-5 0.0 0.0 4.061011004933722E-5 3.248808803946978E-4 15 2.707340669955815E-5 0.0 0.0 8.122022009867445E-5 3.248808803946978E-4 16 4.061011004933722E-5 0.0 0.0 1.082936267982326E-4 4.196378038431513E-4 17 4.061011004933722E-5 0.0 0.0 1.3536703349779073E-4 4.196378038431513E-4 18 4.061011004933722E-5 0.0 0.0 1.7597714354712797E-4 5.008580239418257E-4 19 4.061011004933722E-5 0.0 0.0 1.8951384689690703E-4 5.143947272916048E-4 20 4.061011004933722E-5 0.0 0.0 2.030505502466861E-4 5.143947272916048E-4 21 4.061011004933722E-5 0.0 0.0 2.7073406699558146E-4 5.414681339911629E-4 22 4.061011004933722E-5 0.0 0.0 4.061011004933722E-4 5.685415406907211E-4 23 4.061011004933722E-5 0.0 0.0 5.414681339911629E-4 7.174452775382909E-4 24 4.061011004933722E-5 0.0 0.0 8.392756076863026E-4 7.445186842378491E-4 25 4.061011004933722E-5 1.3536703349779074E-5 0.0 9.746426411840933E-4 7.715920909374072E-4 26 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.0016920879187223843 7.986654976369654E-4 27 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.008473976296961701 8.257389043365235E-4 28 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.02016968799117082 8.257389043365235E-4 29 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.03807874652292854 8.257389043365235E-4 30 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.0645565382750964 8.257389043365235E-4 31 4.061011004933722E-5 1.3536703349779074E-5 0.0 0.17581470310693062 8.528123110360816E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3945 0.0 20.258556 1 TAGTACT 810 0.0 14.160494 4 TATACTG 1505 0.0 13.890365 5 TCTTATA 3385 0.0 13.007386 37 AAGACGG 1170 0.0 12.965813 5 TACCGTG 670 0.0 12.701492 7 GTATCAA 6310 0.0 12.577655 2 GTATTAG 1265 0.0 12.577075 1 ATACCGT 1165 0.0 12.386267 6 GTATAAG 1225 0.0 12.383674 1 ATTATAC 1095 0.0 12.333334 3 GTACATG 13245 0.0 12.333333 1 CTTATAC 2375 0.0 12.307369 37 GTACTAG 515 0.0 12.213592 1 TACATGG 13600 0.0 11.888969 2 GTTACGG 1215 0.0 11.876543 25 ACGGACC 1200 0.0 11.870833 8 TATACCG 440 0.0 11.772728 5 TTATACT 1395 0.0 11.670251 4 TTAGTAC 450 0.0 11.511111 3 >>END_MODULE