##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727260.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5365235 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.54815157211194 31.0 31.0 34.0 30.0 34.0 2 31.76593420418677 31.0 31.0 34.0 30.0 34.0 3 31.937888275164088 31.0 31.0 34.0 30.0 34.0 4 35.64309671430981 37.0 35.0 37.0 33.0 37.0 5 35.4406002719359 37.0 35.0 37.0 33.0 37.0 6 35.44661491994293 37.0 35.0 37.0 33.0 37.0 7 35.3539237330704 37.0 35.0 37.0 33.0 37.0 8 35.31750538420032 37.0 35.0 37.0 33.0 37.0 9 36.842805021588056 39.0 37.0 39.0 33.0 39.0 10 36.63559359468877 39.0 35.0 39.0 32.0 39.0 11 36.71094816909231 39.0 35.0 39.0 32.0 39.0 12 36.53700443689792 38.0 35.0 39.0 32.0 39.0 13 36.53840456196234 38.0 35.0 39.0 32.0 39.0 14 37.50241638996241 39.0 36.0 41.0 32.0 41.0 15 37.43794130173236 39.0 36.0 41.0 32.0 41.0 16 37.33842245493441 39.0 36.0 41.0 32.0 41.0 17 37.68183947208277 39.0 37.0 41.0 32.0 41.0 18 37.707637037333875 39.0 37.0 41.0 32.0 41.0 19 37.807681676571484 40.0 37.0 41.0 32.0 41.0 20 37.76519835571042 40.0 37.0 41.0 32.0 41.0 21 37.72485361778189 40.0 37.0 41.0 32.0 41.0 22 37.67080715010619 40.0 37.0 41.0 32.0 41.0 23 37.55558051045294 39.0 37.0 41.0 32.0 41.0 24 37.451432602672575 39.0 36.0 41.0 32.0 41.0 25 37.35486777373219 39.0 36.0 41.0 31.0 41.0 26 37.086526498839284 39.0 36.0 41.0 31.0 41.0 27 36.90379936759527 39.0 36.0 41.0 30.0 41.0 28 36.70383701739066 39.0 36.0 40.0 30.0 41.0 29 36.54894650467314 39.0 36.0 40.0 30.0 41.0 30 36.416666185171756 39.0 35.0 40.0 30.0 41.0 31 36.24995941463887 39.0 35.0 40.0 29.0 41.0 32 36.10476148761424 39.0 35.0 40.0 28.0 41.0 33 35.940520778679776 38.0 35.0 40.0 27.0 41.0 34 35.81199854246832 38.0 35.0 40.0 27.0 41.0 35 35.64775559691235 38.0 35.0 40.0 26.0 41.0 36 35.53299100598576 38.0 34.0 40.0 26.0 41.0 37 35.48358273216364 38.0 34.0 40.0 25.0 41.0 38 35.37631902423659 38.0 34.0 40.0 25.0 41.0 39 35.21156575620639 38.0 34.0 40.0 25.0 41.0 40 35.14946801025491 38.0 34.0 40.0 24.0 41.0 41 34.94258070708925 38.0 34.0 40.0 24.0 41.0 42 34.78542673340497 38.0 33.0 40.0 24.0 41.0 43 34.514505701986955 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 10.0 12 33.0 13 27.0 14 49.0 15 109.0 16 205.0 17 399.0 18 733.0 19 1683.0 20 3309.0 21 6278.0 22 10795.0 23 17809.0 24 26702.0 25 38132.0 26 51672.0 27 67937.0 28 88484.0 29 112893.0 30 141344.0 31 175813.0 32 216080.0 33 264247.0 34 328065.0 35 407580.0 36 520535.0 37 681929.0 38 1054584.0 39 1147792.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.21525618169567 20.3821081462415 12.796475830042858 26.606159842019967 2 19.402710226113115 22.318686879512267 33.99427984049161 24.284323053883007 3 19.074784235918838 24.55564388139569 30.31824328291305 26.05132859977242 4 15.146307664063178 16.21662424851847 34.01213553553572 34.62493255188263 5 13.397866076695616 39.01776902596065 33.93374195165729 13.650622945686441 6 34.869302090215996 36.78750325009063 14.694398288239006 13.648796371454372 7 28.84356416820512 32.13831267409535 20.563628620181596 18.45449453751793 8 27.219814229945193 36.191518172083796 18.98722050385491 17.6014470941161 9 28.564750658638438 13.96026455504745 17.541710661322384 39.93327412499173 10 16.058718770007278 27.753323013810206 33.28562495398617 22.902333262196343 11 37.56981753828118 21.964368755515835 20.239001646712584 20.226812059490403 12 21.533707284023905 25.064922598916915 29.46506536992322 23.93630474713596 13 30.724469664422898 20.280751914874184 23.82972973224845 25.165048688454466 14 22.67719866883743 20.429654991813035 24.385455623099453 32.50769071625008 15 25.686423800635016 28.30381148262844 21.22648868129728 24.78327603543927 16 24.93012887599518 26.736200744235806 23.588976065354082 24.744694314414932 17 24.355112124632004 26.273481031119793 24.0793926081523 25.2920142360959 18 24.331627598791105 26.372153316676716 24.997432544893186 24.298786539638993 19 25.799895065174216 25.644654893960844 24.833860958560063 23.721589082304874 20 24.79032139319154 24.949960253371938 24.804915348535523 25.454803004900995 21 24.992884747825585 25.542404013990065 25.50866830623449 23.95604293194986 22 25.650749687571935 24.67206003092129 24.254389602692147 25.422800678814628 23 24.816117094591384 25.237328840209234 25.078976037396313 24.86757802780307 24 24.577898265406827 24.960956975789504 25.03370309035858 25.427441668445088 25 25.33190065300029 24.573667323052952 24.557955056954633 25.536476966992126 26 24.918591636713025 25.10760479270712 24.983658684102377 24.99014488647748 27 25.866341362493905 25.329570838928774 24.14744181755319 24.65664598102413 28 24.642629819569876 26.211023375490544 23.882924047129343 25.263422757810233 29 25.062797808483694 25.87666709845887 24.777088049265316 24.283447043792115 30 26.200362146299277 25.10113722884459 24.06750123713127 24.630999387724863 31 25.47804523007846 24.997413906380615 24.854419237927136 24.67012162561379 32 25.03806450230046 25.483506314262094 24.293176347354777 25.185252836082668 33 24.886682503189515 24.606508382205067 24.576034414149614 25.930774700455807 34 25.403267517639023 25.17110620504041 25.239397715104744 24.18622856221582 35 25.48333856764895 24.86340300098691 24.813861834570154 24.83939659679399 36 25.076273453073348 24.97448853591688 25.195373548409343 24.75386446260043 37 24.915889052390064 25.135077960238462 25.55546961130314 24.393563376068336 38 25.697215499414284 24.175008177647392 24.960584205538062 25.167192117400262 39 24.56470219850575 24.94656804408381 25.73986041617935 24.748869341231092 40 25.722936646763845 23.956434340713873 25.58353921123679 24.737089801285496 41 24.396135490803292 24.84776528893888 25.68072041578794 25.07537880446989 42 24.64583564373229 24.820198928844682 25.75574042889081 24.778224998532217 43 24.179555974714994 24.22421385083785 25.535955088640105 26.06027508580705 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 370.0 1 395.0 2 420.0 3 450.0 4 480.0 5 480.0 6 660.5 7 841.0 8 1026.0 9 1211.0 10 1763.5 11 2316.0 12 2316.0 13 4312.5 14 6309.0 15 9367.5 16 12426.0 17 12857.5 18 13289.0 19 13289.0 20 17118.5 21 20948.0 22 23514.5 23 26081.0 24 33228.0 25 40375.0 26 40375.0 27 50033.5 28 59692.0 29 70426.5 30 81161.0 31 96541.0 32 111921.0 33 111921.0 34 131439.0 35 150957.0 36 176229.5 37 201502.0 38 227649.5 39 253797.0 40 253797.0 41 279447.0 42 305097.0 43 330524.0 44 355951.0 45 391051.5 46 426152.0 47 426152.0 48 464140.0 49 502128.0 50 511208.5 51 520289.0 52 510013.0 53 499737.0 54 499737.0 55 472464.5 56 445192.0 57 415144.5 58 385097.0 59 347267.0 60 309437.0 61 309437.0 62 263839.5 63 218242.0 64 186555.5 65 154869.0 66 127660.0 67 100451.0 68 100451.0 69 80826.0 70 61201.0 71 50434.5 72 39668.0 73 31633.5 74 23599.0 75 23599.0 76 18571.5 77 13544.0 78 11013.5 79 8483.0 80 6704.0 81 4925.0 82 4925.0 83 3939.5 84 2954.0 85 2338.0 86 1722.0 87 1443.0 88 1164.0 89 1164.0 90 865.0 91 566.0 92 429.5 93 293.0 94 263.0 95 233.0 96 233.0 97 145.5 98 58.0 99 72.5 100 87.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5365235.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.12893968134512 #Duplication Level Percentage of deduplicated Percentage of total 1 80.86928642253007 44.58238013261082 2 9.69830351013717 10.693143784434596 3 3.433183973564941 5.678033765808673 4 1.6735628387076893 3.6904697915222764 5 0.9652397807186771 2.660632282463737 6 0.666896444340257 2.2059176312242537 7 0.4595144131392331 1.7732779655263038 8 0.3307637925141297 1.4587725733027528 9 0.2526988659688331 1.2537918485586104 >10 1.5071939900409193 15.116517460525678 >50 0.09540181227011633 3.5954907473441904 >100 0.0430352722368277 4.571058439203072 >500 0.0033244928543660897 1.2051865510018749 >1k 0.0015604677645668465 1.41557318690057 >5k 3.3923212272131364E-5 0.09975383957270348 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.591553771642808E-5 2 0.0 0.0 0.0 1.8638512572142693E-5 5.591553771642808E-5 3 0.0 0.0 0.0 1.8638512572142693E-5 5.591553771642808E-5 4 0.0 0.0 0.0 1.8638512572142693E-5 5.591553771642808E-5 5 0.0 0.0 0.0 1.8638512572142693E-5 5.591553771642808E-5 6 0.0 0.0 0.0 1.8638512572142693E-5 1.8638512572142693E-4 7 0.0 0.0 0.0 1.8638512572142693E-5 1.8638512572142693E-4 8 0.0 0.0 0.0 1.8638512572142693E-5 2.42300663437855E-4 9 0.0 0.0 0.0 1.8638512572142693E-5 3.1685471372642577E-4 10 0.0 0.0 0.0 1.8638512572142693E-5 3.1685471372642577E-4 11 0.0 0.0 0.0 1.8638512572142693E-5 3.1685471372642577E-4 12 0.0 0.0 0.0 1.8638512572142693E-5 3.1685471372642577E-4 13 0.0 0.0 0.0 1.8638512572142693E-5 3.541317388707112E-4 14 0.0 0.0 0.0 3.7277025144285385E-5 4.4732430173142465E-4 15 0.0 0.0 0.0 5.591553771642808E-5 5.032398394478528E-4 16 1.8638512572142693E-5 0.0 0.0 9.319256286071347E-5 5.964324023085662E-4 17 1.8638512572142693E-5 0.0 0.0 1.1183107543285616E-4 5.964324023085662E-4 18 1.8638512572142693E-5 0.0 0.0 1.3046958800499886E-4 6.150709148807088E-4 19 1.8638512572142693E-5 0.0 0.0 1.3046958800499886E-4 6.150709148807088E-4 20 1.8638512572142693E-5 0.0 0.0 1.6774661314928422E-4 6.337094274528515E-4 21 1.8638512572142693E-5 0.0 0.0 2.2366215086571233E-4 6.523479400249942E-4 22 1.8638512572142693E-5 0.0 0.0 2.795776885821404E-4 6.523479400249942E-4 23 1.8638512572142693E-5 0.0 0.0 3.9140876401499655E-4 8.760100908907065E-4 24 1.8638512572142693E-5 0.0 0.0 8.200945531742785E-4 8.946486034628493E-4 25 1.8638512572142693E-5 0.0 0.0 9.878411663235627E-4 9.505641411792773E-4 26 1.8638512572142693E-5 0.0 0.0 0.0013792499303385592 0.001025118191467848 27 1.8638512572142693E-5 0.0 0.0 0.00464098963046353 0.0010623952166121334 28 1.8638512572142693E-5 0.0 0.0 0.010884891342131333 0.0010623952166121334 29 1.8638512572142693E-5 0.0 0.0 0.020315978703635534 0.0010810337291842762 30 1.8638512572142693E-5 0.0 0.0 0.03738885621971824 0.0010810337291842762 31 1.8638512572142693E-5 0.0 0.0 0.13199794603591455 0.0010996722417564188 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3385 0.0 19.838997 1 TTCGCGA 90 4.4508502E-5 16.444445 22 TACTTAC 1665 0.0 15.333333 31 TACGGAT 3135 0.0 14.929825 27 CGTTACG 1610 0.0 14.822982 24 TCGTTAC 1750 0.0 14.694286 23 GTTACGG 2820 0.0 14.3670225 25 ACGGATG 3280 0.0 14.213414 28 TATACTG 990 0.0 14.01515 5 GTATCAA 4910 0.0 13.639511 2 ATTATAC 750 0.0 13.566668 3 GTACTTA 1940 0.0 13.541237 30 TTACGGA 3505 0.0 13.459344 26 TAATCCC 1490 0.0 13.409395 5 CGGATGG 3505 0.0 13.300999 29 TCTTATA 2170 0.0 13.129032 37 TTATACT 960 0.0 13.104166 4 TAATACG 170 3.7388054E-7 13.058824 4 CGAACGT 255 1.6370905E-11 13.058824 4 GGGCGTC 2010 0.0 12.977612 11 >>END_MODULE