##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727258.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9033425 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.570110340208725 31.0 31.0 34.0 30.0 34.0 2 31.790581756089193 31.0 31.0 34.0 30.0 34.0 3 31.964723789703243 31.0 31.0 34.0 30.0 34.0 4 35.6721973116509 37.0 35.0 37.0 35.0 37.0 5 35.47337228127759 37.0 35.0 37.0 33.0 37.0 6 35.47898001035045 37.0 35.0 37.0 33.0 37.0 7 35.37874693153483 37.0 35.0 37.0 33.0 37.0 8 35.33558534000116 37.0 35.0 37.0 33.0 37.0 9 36.883107680641615 39.0 37.0 39.0 33.0 39.0 10 36.67427415404456 39.0 35.0 39.0 32.0 39.0 11 36.73213559641 39.0 35.0 39.0 32.0 39.0 12 36.56200444460435 38.0 35.0 39.0 32.0 39.0 13 36.54817679894392 38.0 35.0 39.0 32.0 39.0 14 37.55722032341 39.0 36.0 41.0 32.0 41.0 15 37.47678737577386 39.0 36.0 41.0 32.0 41.0 16 37.39772013383628 39.0 36.0 41.0 32.0 41.0 17 37.71083437345193 39.0 37.0 41.0 32.0 41.0 18 37.73601275263812 39.0 37.0 41.0 32.0 41.0 19 37.81381790406186 40.0 37.0 41.0 32.0 41.0 20 37.775534085908724 40.0 37.0 41.0 32.0 41.0 21 37.72372029435126 40.0 37.0 41.0 32.0 41.0 22 37.65757915740708 40.0 37.0 41.0 32.0 41.0 23 37.53450568306041 39.0 37.0 41.0 32.0 41.0 24 37.407064430157995 39.0 36.0 41.0 31.0 41.0 25 37.32719505613873 39.0 36.0 41.0 31.0 41.0 26 37.03564129884291 39.0 36.0 41.0 31.0 41.0 27 36.84736177031414 39.0 36.0 41.0 30.0 41.0 28 36.64249041753266 39.0 36.0 41.0 30.0 41.0 29 36.47090809964106 39.0 36.0 40.0 30.0 41.0 30 36.32353509327857 39.0 35.0 40.0 29.0 41.0 31 36.1715139053017 39.0 35.0 40.0 28.0 41.0 32 36.02903516661731 39.0 35.0 40.0 27.0 41.0 33 35.85294547749054 38.0 35.0 40.0 27.0 41.0 34 35.72008501758746 38.0 35.0 40.0 26.0 41.0 35 35.55341822177081 38.0 34.0 40.0 26.0 41.0 36 35.46202774695091 38.0 34.0 40.0 25.0 41.0 37 35.38065229965379 38.0 34.0 40.0 25.0 41.0 38 35.262952645314485 38.0 34.0 40.0 25.0 41.0 39 35.12314188693657 38.0 34.0 40.0 24.0 41.0 40 35.02524568477626 38.0 34.0 40.0 24.0 41.0 41 34.81241644226858 38.0 33.0 40.0 23.0 41.0 42 34.63192299709136 38.0 33.0 40.0 23.0 41.0 43 34.344687424758604 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 18.0 11 35.0 12 64.0 13 84.0 14 121.0 15 237.0 16 455.0 17 851.0 18 1608.0 19 3354.0 20 6235.0 21 11691.0 22 20099.0 23 32534.0 24 48513.0 25 67229.0 26 91403.0 27 118345.0 28 153442.0 29 192546.0 30 239020.0 31 296061.0 32 361031.0 33 442497.0 34 544265.0 35 678028.0 36 865895.0 37 1141872.0 38 1773949.0 39 1941940.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.67825879995683 20.307745954607473 12.331557521095265 26.682437724340435 2 19.60901872766974 22.282168723380114 33.36795290822695 24.740859640723205 3 19.111477651057047 24.541333990153234 29.67332988318384 26.673858475605876 4 14.832148382258115 16.11293612334192 34.18186346817514 34.873052026224826 5 13.54451938218339 38.41960275310859 34.27642339422755 13.759454470480465 6 35.09661064324993 37.09807741803358 14.434281570943469 13.37103036777302 7 29.436144098168743 31.231675693327837 20.7996081220578 18.53257208644562 8 27.387131680398074 35.43207587376881 18.843705460553444 18.33708698527967 9 27.698375754489575 13.99183587620421 17.650060746616038 40.65972762269018 10 16.193215751500674 27.1300420383188 33.34720773128686 23.329534478893667 11 37.887800031549496 21.691108300561527 20.43378895601613 19.98730271187285 12 21.67192399339121 25.13020255329512 29.36009320938625 23.837780243927416 13 30.580892629318335 19.788120231252265 24.203145540036033 25.427841599393364 14 22.82695655302391 20.28964650727714 23.968904374586604 32.91449256511235 15 25.27568447183654 28.186474122495063 20.960831578277343 25.577009827391052 16 25.584338166310122 26.223021722104296 22.993571098448264 25.199069013137322 17 24.558282157653384 26.423565812524043 23.963889665326274 25.0542623644963 18 25.04721077553641 25.49185939995074 24.648557994337697 24.812371830175156 19 25.675875982808293 25.369115258055498 24.40759733987939 24.547411419256814 20 25.34455093167874 24.88348549968589 24.342217929522857 25.429745639112518 21 25.646418717153242 25.271976022383534 24.369527615494675 24.71207764496855 22 25.808051763312367 24.686339898764864 24.18716046239383 25.31844787552894 23 25.034159247461513 24.734616161644116 24.42586283718523 25.805361753709143 24 25.187201974887707 25.10175265749148 24.247580513481875 25.463464854138934 25 25.62485436033398 24.62710433750211 24.18979512200522 25.55824618015869 26 25.53802129314186 25.145523431035294 24.228030896365443 25.088424379457404 27 25.921707436548154 25.061612843412107 23.847776452452973 25.168903267586767 28 25.41865350074861 25.132892562898345 24.203566199973984 25.244887736379056 29 25.355964099995294 25.283621660665805 24.345118269095057 25.015295970243844 30 25.54217254252955 25.239341667197102 24.188555282188094 25.02993050808525 31 25.70699374821842 24.789678333522446 24.239499414673837 25.263828503585295 32 25.30610482734954 25.00319646202852 23.952753246968896 25.737945463653045 33 25.163633948363994 24.660668572551387 24.260045331643312 25.91565214744131 34 25.799516794571275 24.780003154949533 24.527430072204066 24.89304997827513 35 25.870420134113033 24.634886546354235 24.45995843215613 25.034734887376604 36 25.319632365354227 24.92949241289987 24.537271300752483 25.21360392099342 37 25.617304621447566 24.56440386675043 24.67613336027033 25.142158151531675 38 25.381414026241433 24.29720731616192 24.799043552141075 25.522335105455575 39 25.49840176898574 24.460290532107145 24.674273600544645 25.367034098362474 40 25.662304164810134 24.17379897436465 25.035288387294962 25.12860847353025 41 24.860260643111555 24.582558664072597 25.275186321910013 25.28199437090583 42 25.357137519822214 24.457832992469633 25.273780432117388 24.911249055590766 43 24.952230189546047 23.853178611656155 25.231648018331914 25.96294318046588 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 212.0 1 230.0 2 248.0 3 275.0 4 302.0 5 302.0 6 415.5 7 529.0 8 714.0 9 899.0 10 1352.0 11 1805.0 12 1805.0 13 3566.0 14 5327.0 15 8276.5 16 11226.0 17 11973.5 18 12721.0 19 12721.0 20 17698.0 21 22675.0 22 27361.0 23 32047.0 24 42074.5 25 52102.0 26 52102.0 27 67378.5 28 82655.0 29 99290.0 30 115925.0 31 143181.5 32 170438.0 33 170438.0 34 206648.0 35 242858.0 36 291527.5 37 340197.0 38 393306.0 39 446415.0 40 446415.0 41 489900.0 42 533385.0 43 577938.5 44 622492.0 45 673384.5 46 724277.0 47 724277.0 48 779071.5 49 833866.0 50 840266.5 51 846667.0 52 825957.5 53 805248.0 54 805248.0 55 774935.0 56 744622.0 57 699679.5 58 654737.0 59 600610.5 60 546484.0 61 546484.0 62 471170.5 63 395857.0 64 340184.0 65 284511.0 66 236457.0 67 188403.0 68 188403.0 69 152264.5 70 116126.0 71 97894.0 72 79662.0 73 63884.0 74 48106.0 75 48106.0 76 37298.5 77 26491.0 78 22147.5 79 17804.0 80 13895.5 81 9987.0 82 9987.0 83 8166.5 84 6346.0 85 5074.0 86 3802.0 87 3403.0 88 3004.0 89 3004.0 90 2109.0 91 1214.0 92 976.0 93 738.0 94 710.0 95 682.0 96 682.0 97 417.5 98 153.0 99 166.5 100 180.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9033425.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.489426063983714 #Duplication Level Percentage of deduplicated Percentage of total 1 79.65011678584442 39.41838565660716 2 9.827711236058539 9.727355771902022 3 3.6199278687885457 5.374444578580947 4 1.872544324182067 3.70684575532563 5 1.1181665035618988 2.766870925262489 6 0.7595421183775052 2.2553582105955066 7 0.500156549984566 1.732672242061485 8 0.3803589284097707 1.5058996052249138 9 0.2875527270186102 1.2807737480955963 >10 1.7590434989667905 16.41321285509995 >50 0.1475257942788656 5.024119972941574 >100 0.07017749635162424 6.144551734038896 >500 0.0035550712478177966 1.2126275699755336 >1k 0.0035086405373914416 3.1208221787269586 >5k 1.1245639167881497E-4 0.31605919556133677 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.106999836717524E-5 0.0 3 0.0 0.0 0.0 1.106999836717524E-5 0.0 4 0.0 0.0 0.0 2.213999673435048E-5 0.0 5 0.0 0.0 0.0 3.320999510152572E-5 0.0 6 1.106999836717524E-5 0.0 0.0 3.320999510152572E-5 1.106999836717524E-5 7 1.106999836717524E-5 0.0 0.0 3.320999510152572E-5 2.213999673435048E-5 8 1.106999836717524E-5 0.0 0.0 4.427999346870096E-5 3.320999510152572E-5 9 1.106999836717524E-5 0.0 0.0 5.53499918358762E-5 5.53499918358762E-5 10 1.106999836717524E-5 0.0 0.0 7.748998857022669E-5 5.53499918358762E-5 11 1.106999836717524E-5 0.0 0.0 7.748998857022669E-5 5.53499918358762E-5 12 1.106999836717524E-5 0.0 0.0 8.855998693740192E-5 5.53499918358762E-5 13 1.106999836717524E-5 0.0 0.0 8.855998693740192E-5 5.53499918358762E-5 14 1.106999836717524E-5 0.0 0.0 8.855998693740192E-5 9.962998530457716E-5 15 2.213999673435048E-5 1.106999836717524E-5 0.0 8.855998693740192E-5 1.106999836717524E-4 16 4.427999346870096E-5 1.106999836717524E-5 0.0 1.106999836717524E-4 2.1032996897632958E-4 17 4.427999346870096E-5 1.106999836717524E-5 0.0 1.2176998203892765E-4 2.1032996897632958E-4 18 4.427999346870096E-5 1.106999836717524E-5 0.0 1.2176998203892765E-4 2.5460996244503056E-4 19 4.427999346870096E-5 1.106999836717524E-5 0.0 1.5497997714045337E-4 2.76749959179381E-4 20 4.427999346870096E-5 1.106999836717524E-5 0.0 1.5497997714045337E-4 2.76749959179381E-4 21 4.427999346870096E-5 1.106999836717524E-5 0.0 1.6604997550762862E-4 3.0995995428090674E-4 22 4.427999346870096E-5 1.106999836717524E-5 0.0 2.213999673435048E-4 3.2102995264808197E-4 23 4.427999346870096E-5 1.106999836717524E-5 0.0 3.2102995264808197E-4 4.870799281557106E-4 24 4.427999346870096E-5 1.106999836717524E-5 0.0 5.202899232572363E-4 5.202899232572363E-4 25 5.53499918358762E-5 1.106999836717524E-5 0.0 6.199199085618135E-4 5.313599216244116E-4 26 5.53499918358762E-5 1.106999836717524E-5 0.0 9.077398661083698E-4 5.424299199915868E-4 27 5.53499918358762E-5 1.106999836717524E-5 0.0 0.0028228495836296864 5.424299199915868E-4 28 5.53499918358762E-5 1.106999836717524E-5 0.0 0.006498089041531867 5.424299199915868E-4 29 5.53499918358762E-5 1.106999836717524E-5 0.0 0.012785848114087403 5.424299199915868E-4 30 5.53499918358762E-5 1.106999836717524E-5 0.0 0.024232226425746604 5.424299199915868E-4 31 5.53499918358762E-5 1.106999836717524E-5 0.0 0.08264860780933035 5.53499918358762E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 1375 0.0 15.876364 5 CCGATAA 1100 0.0 15.640909 9 CGATAAC 1130 0.0 15.553097 10 AACGAAC 1135 0.0 15.15859 14 CGAACGA 1135 0.0 14.995595 16 ACGAACG 1195 0.0 14.707113 15 TAGTACT 895 0.0 14.675978 4 AAGACGG 2145 0.0 14.230769 5 TATACCG 475 0.0 14.021052 5 TAACGAA 1245 0.0 13.819277 13 CAAGACG 2360 0.0 13.79661 4 GGTATCA 5135 0.0 13.618305 1 GATAACG 1265 0.0 13.454546 11 ATAACGA 1280 0.0 13.441407 12 TCGTTAC 785 0.0 13.197453 23 TTATACT 1390 0.0 13.176259 4 TAGAGTG 1475 0.0 13.169492 5 TTAGAGT 1475 0.0 13.169492 4 ATTCCGA 1430 0.0 13.066434 6 ATACCGT 2125 0.0 12.884706 6 >>END_MODULE