##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727257.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7580497 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.575366496418376 31.0 31.0 34.0 30.0 34.0 2 31.79256069885655 31.0 31.0 34.0 30.0 34.0 3 31.96795262896351 31.0 31.0 34.0 30.0 34.0 4 35.672180729047184 37.0 35.0 37.0 35.0 37.0 5 35.47224885122967 37.0 35.0 37.0 33.0 37.0 6 35.483102756982824 37.0 35.0 37.0 33.0 37.0 7 35.389052723060246 37.0 35.0 37.0 33.0 37.0 8 35.347698970133486 37.0 35.0 37.0 33.0 37.0 9 36.89616841745337 39.0 37.0 39.0 33.0 39.0 10 36.69050564890402 39.0 35.0 39.0 32.0 39.0 11 36.76112186311794 39.0 35.0 39.0 32.0 39.0 12 36.59139341391468 38.0 35.0 39.0 32.0 39.0 13 36.584782237892846 38.0 35.0 39.0 32.0 39.0 14 37.58681192011553 39.0 36.0 41.0 32.0 41.0 15 37.51975787339537 39.0 36.0 41.0 32.0 41.0 16 37.43453285450809 39.0 36.0 41.0 32.0 41.0 17 37.74842586178716 39.0 37.0 41.0 32.0 41.0 18 37.76985532742774 40.0 37.0 41.0 32.0 41.0 19 37.85598648742952 40.0 37.0 41.0 32.0 41.0 20 37.82090593796159 40.0 37.0 41.0 32.0 41.0 21 37.77809462888779 40.0 37.0 41.0 32.0 41.0 22 37.7189225191963 40.0 37.0 41.0 32.0 41.0 23 37.608072003722185 40.0 37.0 41.0 32.0 41.0 24 37.50291478250041 39.0 37.0 41.0 32.0 41.0 25 37.41786785220019 39.0 36.0 41.0 31.0 41.0 26 37.153154206116035 39.0 36.0 41.0 31.0 41.0 27 36.97830603982826 39.0 36.0 41.0 30.0 41.0 28 36.79061755449544 39.0 36.0 41.0 30.0 41.0 29 36.63330016488365 39.0 36.0 40.0 30.0 41.0 30 36.498888925092906 39.0 36.0 40.0 30.0 41.0 31 36.34955029993416 39.0 35.0 40.0 29.0 41.0 32 36.20457088763441 39.0 35.0 40.0 29.0 41.0 33 36.04602468677186 39.0 35.0 40.0 28.0 41.0 34 35.922123971554896 38.0 35.0 40.0 27.0 41.0 35 35.76788408464511 38.0 35.0 40.0 27.0 41.0 36 35.68068492079081 38.0 35.0 40.0 26.0 41.0 37 35.6155217791129 38.0 35.0 40.0 26.0 41.0 38 35.51603107289667 38.0 34.0 40.0 26.0 41.0 39 35.370612771167906 38.0 34.0 40.0 25.0 41.0 40 35.29659664795066 38.0 34.0 40.0 25.0 41.0 41 35.09148780086583 38.0 34.0 40.0 24.0 41.0 42 34.93009007193064 38.0 34.0 40.0 24.0 41.0 43 34.65308171746523 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 21.0 12 42.0 13 55.0 14 85.0 15 143.0 16 339.0 17 594.0 18 1122.0 19 2209.0 20 4611.0 21 8453.0 22 14815.0 23 24122.0 24 36373.0 25 50944.0 26 69370.0 27 92330.0 28 120412.0 29 152346.0 30 193064.0 31 240905.0 32 298157.0 33 364425.0 34 453975.0 35 568856.0 36 728339.0 37 966985.0 38 1517478.0 39 1669919.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.68931100427848 20.069554806235 12.440081435293754 26.801052754192767 2 19.392488381698456 22.0955565314517 33.87768638388749 24.634268702962352 3 19.20338468572707 24.453185589282604 29.785276611810545 26.558153113179785 4 14.97949276940549 16.079750443803356 34.1166548842378 34.82410190255336 5 13.526975869787957 38.51709195320571 34.214498073147446 13.741434103858891 6 35.1505712620162 36.854008384938346 14.52809756405154 13.467322788993913 7 29.206172101908358 31.400685205732554 20.791064227055298 18.60207846530379 8 27.23011433155372 35.92433319345684 18.858380921462008 17.987171553527425 9 28.022595352257245 13.916541356061481 17.516991300174645 40.54387199150663 10 15.952977753305623 27.334883187738217 33.536877595228916 23.175261463727246 11 37.79782512940774 21.654582806378 20.376816981788927 20.170775082425337 12 21.61529778324561 24.95056722534156 29.561940331880614 23.872194659532216 13 30.71210238589897 19.92151701926668 24.032395237409894 25.333985357424453 14 22.705054826880083 20.239504085286228 24.212871530718896 32.84256955711479 15 25.506823629110336 28.091522231325992 21.087588320396407 25.314065819167265 16 25.242869959581803 26.418122716755903 23.354801142985743 24.984206180676544 17 24.574958607595253 26.23573362010433 24.028609205966312 25.160698566334105 18 24.754669779567223 25.850429068173238 24.81098534832215 24.58391580393739 19 25.706810516513627 25.510965837728055 24.6148372593512 24.16738638640712 20 25.13184821522916 24.94125385182528 24.544709931288146 25.38218800165741 21 25.276654024135887 25.353627868990646 24.956648620796233 24.413069486077234 22 25.589351199532167 24.723563639692753 24.241022719222762 25.446062441552314 23 24.845376233246977 24.93909040528609 24.78879682954825 25.426736531918685 24 24.88216801616042 25.114698943881912 24.626168970187575 25.376964069770096 25 25.452539589422702 24.606196664941628 24.33348367527881 25.607780070356867 26 25.26261800512552 25.111189939129318 24.602028072829526 25.02416398291563 27 25.853990839914587 25.155566976677125 24.02302909690486 24.96741308650343 28 25.053884989335135 25.575301988774612 24.116255174297937 25.254557847592313 29 25.290004072292362 25.460599746955904 24.508894337666778 24.740501843084957 30 25.731188865321098 25.238793709700037 24.170776665435 24.859240759543866 31 25.702866184103762 24.816974401546496 24.44826506758066 25.031894346769086 32 25.120107560229886 25.2720632961137 24.197318460781663 25.410510682874747 33 25.0406140916618 24.69427796093053 24.437223575182472 25.827884372225196 34 25.55344326368047 24.910345588158666 24.808069972193117 24.72814117596775 35 25.616763650193384 24.89872365888411 24.633899334041025 24.85061335688148 36 25.309237639695652 24.970869324267262 24.73296935543936 24.986923680597723 37 25.258475796507803 24.906981692625166 25.03579910393738 24.798743406929653 38 25.610932897935317 24.348918019491332 24.82706608814699 25.213082994426355 39 25.10488428397241 24.749142437494534 25.04965043848708 25.096322840045975 40 25.71037228825498 24.20894039005622 25.208756101347973 24.87193122034083 41 24.72729690414758 24.765091259847473 25.257591949446056 25.25001988655889 42 25.11359083711794 24.770038165043793 25.302523040375846 24.81384795746242 43 24.77308545864473 24.159458146345813 25.214666004089175 25.852790390920276 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 202.0 1 245.5 2 289.0 3 331.5 4 374.0 5 374.0 6 502.5 7 631.0 8 814.5 9 998.0 10 1463.0 11 1928.0 12 1928.0 13 3777.5 14 5627.0 15 8980.0 16 12333.0 17 12880.0 18 13427.0 19 13427.0 20 17760.0 21 22093.0 22 26012.0 23 29931.0 24 38681.5 25 47432.0 26 47432.0 27 61173.0 28 74914.0 29 90101.0 30 105288.0 31 127465.5 32 149643.0 33 149643.0 34 179009.0 35 208375.0 36 247390.5 37 286406.0 38 326328.0 39 366250.0 40 366250.0 41 402485.5 42 438721.0 43 477854.5 44 516988.0 45 562758.5 46 608529.0 47 608529.0 48 659255.5 49 709982.0 50 722175.0 51 734368.0 52 711354.5 53 688341.0 54 688341.0 55 655804.5 56 623268.0 57 583462.5 58 543657.0 59 494656.0 60 445655.0 61 445655.0 62 382584.0 63 319513.0 64 272640.5 65 225768.0 66 187524.5 67 149281.0 68 149281.0 69 121265.5 70 93250.0 71 78073.0 72 62896.0 73 50465.0 74 38034.0 75 38034.0 76 29876.5 77 21719.0 78 17979.5 79 14240.0 80 11173.5 81 8107.0 82 8107.0 83 6533.0 84 4959.0 85 3902.0 86 2845.0 87 2507.5 88 2170.0 89 2170.0 90 1530.5 91 891.0 92 708.5 93 526.0 94 493.0 95 460.0 96 460.0 97 268.0 98 76.0 99 94.0 100 112.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7580497.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.09309306445752 #Duplication Level Percentage of deduplicated Percentage of total 1 79.90936822637127 41.62726155738364 2 9.949910554761269 10.366432330244141 3 3.5918383445284934 5.613299074620294 4 1.7783413550683576 3.7055720683979785 5 1.0558685430146268 2.7501729137547057 6 0.7018018883158614 2.1935418648510114 7 0.5096377344421497 1.8584024150617933 8 0.3707826088547783 1.5452170359803457 9 0.2896685722092068 1.3580758700948468 >10 1.6607618872845002 16.05987045495008 >50 0.1218995401734212 4.343190877263417 >100 0.05367647019903111 5.001127065709354 >500 0.004355754237672222 1.5962493470848211 >1k 0.002063050777659068 1.909475616728409 >5k 2.546976182263992E-5 0.07211150787517756 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.276698876076331E-5 2 0.0 0.0 0.0 0.0 5.276698876076331E-5 3 0.0 0.0 0.0 0.0 5.276698876076331E-5 4 0.0 0.0 0.0 1.3191747190190828E-5 5.276698876076331E-5 5 0.0 0.0 0.0 2.6383494380381656E-5 5.276698876076331E-5 6 0.0 0.0 0.0 2.6383494380381656E-5 1.319174719019083E-4 7 0.0 0.0 0.0 3.9575241570572485E-5 1.451092190920991E-4 8 0.0 0.0 0.0 3.9575241570572485E-5 1.846844606626716E-4 9 0.0 0.0 0.0 7.915048314114497E-5 4.089441628959157E-4 10 0.0 0.0 0.0 9.23422303313358E-5 4.089441628959157E-4 11 0.0 0.0 0.0 9.23422303313358E-5 4.221359100861065E-4 12 0.0 0.0 0.0 9.23422303313358E-5 4.221359100861065E-4 13 0.0 0.0 0.0 9.23422303313358E-5 4.221359100861065E-4 14 0.0 0.0 0.0 9.23422303313358E-5 4.749028988468698E-4 15 0.0 0.0 0.0 9.23422303313358E-5 4.880946460370606E-4 16 3.9575241570572485E-5 0.0 0.0 1.1872572471171745E-4 5.936286235585873E-4 17 3.9575241570572485E-5 0.0 0.0 1.451092190920991E-4 6.068203707487781E-4 18 3.9575241570572485E-5 0.0 0.0 1.451092190920991E-4 6.85970853889923E-4 19 3.9575241570572485E-5 0.0 0.0 1.5830096628228994E-4 7.255460954604955E-4 20 3.9575241570572485E-5 1.3191747190190828E-5 0.0 1.5830096628228994E-4 7.255460954604955E-4 21 3.9575241570572485E-5 1.3191747190190828E-5 0.0 2.2425970223324408E-4 7.65121337031068E-4 22 3.9575241570572485E-5 1.3191747190190828E-5 0.0 3.0341018537438907E-4 7.783130842212589E-4 23 3.9575241570572485E-5 1.3191747190190828E-5 0.0 4.353276572762973E-4 9.761892920741212E-4 24 3.9575241570572485E-5 1.3191747190190828E-5 0.0 5.672451291782056E-4 9.761892920741212E-4 25 3.9575241570572485E-5 1.3191747190190828E-5 0.0 6.991626010801139E-4 9.761892920741212E-4 26 3.9575241570572485E-5 1.3191747190190828E-5 0.0 9.893810392643122E-4 9.761892920741212E-4 27 3.9575241570572485E-5 1.3191747190190828E-5 0.0 0.003218786314406562 9.893810392643122E-4 28 3.9575241570572485E-5 1.3191747190190828E-5 0.0 0.006318846904101407 9.893810392643122E-4 29 3.9575241570572485E-5 1.3191747190190828E-5 0.0 0.011872572471171745 0.0010025727864545028 30 5.276698876076331E-5 1.3191747190190828E-5 0.0 0.022214902268281354 0.0010025727864545028 31 5.276698876076331E-5 1.3191747190190828E-5 0.0 0.07999475496131718 0.0010289562808348846 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 1015 0.0 14.945813 8 ACCGTCC 695 0.0 14.906475 8 TAATACT 1015 0.0 14.763547 4 TACCGTC 1120 0.0 14.700892 7 AAGACGG 1555 0.0 14.51447 5 TAGTACT 650 0.0 14.230769 4 TTAGAGT 1100 0.0 14.127274 4 ATACCGT 1285 0.0 14.10895 6 TATACCG 395 0.0 14.050632 5 CAAGACG 1635 0.0 13.351682 4 TTAGTAC 435 0.0 13.1839075 3 ACGGACC 1560 0.0 13.163462 8 CGTCGTA 1155 0.0 12.974026 10 GTAATAC 685 0.0 12.693431 3 CCGTCGT 1110 0.0 12.666667 9 GTATTAG 1125 0.0 12.662222 1 CCTATAC 760 0.0 12.657895 3 GACGGAC 1685 0.0 12.626114 7 ATTATAC 870 0.0 12.545977 3 CGCAAGA 1835 0.0 12.501363 2 >>END_MODULE