##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727255.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6634594 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.519631042984695 31.0 31.0 34.0 30.0 34.0 2 31.728327008404733 31.0 31.0 34.0 30.0 34.0 3 31.90835701476232 31.0 31.0 34.0 30.0 34.0 4 35.616543679990066 37.0 35.0 37.0 33.0 37.0 5 35.41483955159879 37.0 35.0 37.0 33.0 37.0 6 35.43066448376494 37.0 35.0 37.0 33.0 37.0 7 35.32877912348518 37.0 35.0 37.0 33.0 37.0 8 35.29438817205695 37.0 35.0 37.0 32.0 37.0 9 36.83476110218651 39.0 37.0 39.0 33.0 39.0 10 36.628482164846865 39.0 35.0 39.0 32.0 39.0 11 36.688220560293516 39.0 35.0 39.0 32.0 39.0 12 36.520827348289885 38.0 35.0 39.0 32.0 39.0 13 36.510270108464816 38.0 35.0 39.0 32.0 39.0 14 37.50294366166189 39.0 36.0 41.0 32.0 41.0 15 37.42912060632497 39.0 36.0 41.0 32.0 41.0 16 37.35357596862747 39.0 36.0 41.0 32.0 41.0 17 37.66017995976845 39.0 37.0 41.0 32.0 41.0 18 37.69533644409891 39.0 37.0 41.0 32.0 41.0 19 37.772366176438226 40.0 37.0 41.0 32.0 41.0 20 37.7388200393272 40.0 37.0 41.0 32.0 41.0 21 37.691792293545014 40.0 37.0 41.0 32.0 41.0 22 37.62876793968101 40.0 37.0 41.0 32.0 41.0 23 37.512454115504276 39.0 37.0 41.0 32.0 41.0 24 37.3997438275801 39.0 36.0 41.0 31.0 41.0 25 37.32383338000788 39.0 36.0 41.0 31.0 41.0 26 37.04273931456846 39.0 36.0 41.0 31.0 41.0 27 36.8538936971878 39.0 36.0 41.0 30.0 41.0 28 36.665965845084116 39.0 36.0 40.0 30.0 41.0 29 36.49956169134087 39.0 36.0 40.0 30.0 41.0 30 36.36348448752101 39.0 35.0 40.0 29.0 41.0 31 36.20619046169215 39.0 35.0 40.0 29.0 41.0 32 36.06299782624227 39.0 35.0 40.0 28.0 41.0 33 35.898459498802794 38.0 35.0 40.0 27.0 41.0 34 35.774074494987936 38.0 35.0 40.0 27.0 41.0 35 35.61185236052123 38.0 35.0 40.0 26.0 41.0 36 35.52588070950536 38.0 34.0 40.0 26.0 41.0 37 35.44730182434675 38.0 34.0 40.0 25.0 41.0 38 35.33822597132545 38.0 34.0 40.0 25.0 41.0 39 35.21007525102516 38.0 34.0 40.0 25.0 41.0 40 35.1144296094079 38.0 34.0 40.0 24.0 41.0 41 34.91513708299257 38.0 34.0 40.0 24.0 41.0 42 34.73542736752241 38.0 33.0 40.0 23.0 41.0 43 34.46092797841134 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 18.0 11 26.0 12 55.0 13 66.0 14 102.0 15 197.0 16 368.0 17 585.0 18 1183.0 19 2247.0 20 4316.0 21 8203.0 22 14146.0 23 22959.0 24 34411.0 25 48550.0 26 65873.0 27 86304.0 28 113004.0 29 142389.0 30 177475.0 31 221456.0 32 268800.0 33 326924.0 34 402616.0 35 497342.0 36 633878.0 37 833787.0 38 1302735.0 39 1424574.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.72347154927641 20.306186030373524 12.279048273338203 26.691294147011856 2 19.38233145841328 22.367095861479992 33.60585440495681 24.64471827514992 3 19.196954629024777 24.71991503926239 29.656645154172207 26.42648517754063 4 14.711525678888565 16.068714980901618 34.41134453743515 34.80841480277467 5 13.366650619465185 38.56339965942151 34.393996075720686 13.67595364539262 6 34.94245465510022 37.23034144968027 14.504519794278291 13.322684100941217 7 29.228585803441774 31.30636177586752 20.905996659328363 18.559055761362337 8 27.323510677518474 35.665136404729516 18.886536237183467 18.124816680568546 9 27.755956129342657 13.825849780710017 17.67032014317681 40.74787394677052 10 15.8705265160159 27.320616755147338 33.55896381903701 23.249892909799755 11 37.784663236363826 21.72096740207464 20.506062616642403 19.988306744919132 12 21.619077218590917 25.270167247611536 29.59781713847147 23.512938395326074 13 30.564975038412296 19.923208564080937 24.333154372370036 25.178662025136727 14 22.690732846651958 20.26339516781283 24.260173267572966 32.78569871796225 15 25.247437898988245 28.18791926077165 21.13968089079754 25.424961949442576 16 25.292971958796574 26.438106084562218 23.220833105989605 25.048088850651602 17 24.39777023281304 26.54453309426319 24.22598880956393 24.831707863359835 18 24.89633879631519 25.594512640863933 24.8894205131467 24.619728049674176 19 25.544939147745893 25.56323717773838 24.68630333672264 24.20552033779309 20 25.156143691686335 25.032142132585655 24.644446969927625 25.167267205800385 21 25.40140361264005 25.42880544009174 24.694608291027304 24.47518265624091 22 25.44440549037364 24.936627621825842 24.32796942812175 25.29099745967877 23 24.716493578959014 24.94790186106339 24.756933129593158 25.578671430384436 24 24.915089001678172 25.38744646620426 24.52431904650081 25.173145485616754 25 25.375328166275136 24.82986901685318 24.42544336548702 25.369359451384664 26 25.26416838769637 25.283069318182843 24.543536499746633 24.909225794374155 27 25.639489017715327 25.287500636813647 24.081277618494816 24.99173272697621 28 25.044275505027137 25.310124477850493 24.497520119543108 25.14807989757926 29 25.17290432541916 25.474218919801274 24.563899463931026 24.788977290848543 30 25.348484021780383 25.418239608934623 24.488235451935715 24.745040917349275 31 25.517205725022514 24.929860063780843 24.4309900500317 25.12194416116495 32 24.86970566699334 25.290469921746528 24.337329458290892 25.50249495296924 33 24.87190625379639 24.877799606125105 24.687991458105802 25.562302681972703 34 25.35350316839282 24.93665776685054 24.871243063253004 24.838596001503635 35 25.5779931673287 24.973057884174978 24.661267893709848 24.78768105478647 36 25.153807452272137 25.139413202978204 24.73987104561334 24.966908299136314 37 25.293258336531217 24.809144312372393 24.93270876861493 24.96488858248146 38 25.09597422238648 24.556589295441437 25.1574700727731 25.189966409398977 39 25.148170332653365 24.671728217280513 25.000052753793224 25.180048696272898 40 25.390958361581735 24.479840062556953 25.288450205091678 24.840751370769638 41 24.58340329491149 24.801427186049366 25.492803327528406 25.122366191510736 42 25.135388842180852 24.728084340955906 25.436869234198806 24.699657582664443 43 24.66429746869213 24.198285531865253 25.4349550251304 25.702461974312218 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 208.0 1 248.5 2 289.0 3 348.5 4 408.0 5 408.0 6 600.0 7 792.0 8 1029.5 9 1267.0 10 1845.5 11 2424.0 12 2424.0 13 4885.0 14 7346.0 15 11362.0 16 15378.0 17 15149.5 18 14921.0 19 14921.0 20 19315.0 21 23709.0 22 26501.0 23 29293.0 24 37819.0 25 46345.0 26 46345.0 27 58171.0 28 69997.0 29 83362.5 30 96728.0 31 115390.5 32 134053.0 33 134053.0 34 160437.0 35 186821.0 36 221412.0 37 256003.0 38 293334.0 39 330665.0 40 330665.0 41 360037.0 42 389409.0 43 419677.5 44 449946.0 45 486455.0 46 522964.0 47 522964.0 48 563996.5 49 605029.0 50 614115.0 51 623201.0 52 601350.0 53 579499.0 54 579499.0 55 559124.5 56 538750.0 57 505981.0 58 473212.0 59 431291.5 60 389371.0 61 389371.0 62 336102.5 63 282834.0 64 241783.5 65 200733.0 66 167364.0 67 133995.0 68 133995.0 69 109541.5 70 85088.0 71 71963.0 72 58838.0 73 46481.0 74 34124.0 75 34124.0 76 26746.0 77 19368.0 78 16079.0 79 12790.0 80 9977.0 81 7164.0 82 7164.0 83 5820.5 84 4477.0 85 3606.0 86 2735.0 87 2491.5 88 2248.0 89 2248.0 90 1567.5 91 887.0 92 722.5 93 558.0 94 530.5 95 503.0 96 503.0 97 296.0 98 89.0 99 112.0 100 135.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6634594.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.88823307658534 #Duplication Level Percentage of deduplicated Percentage of total 1 81.57876629532659 45.592931048134965 2 9.457550105375406 10.571315292454099 3 3.308059591215271 5.5464481639521805 4 1.614500587555212 3.6092634055827864 5 0.9651996828050778 2.697165241902822 6 0.6157692847259186 2.0648554383698623 7 0.4300241766574971 1.6823303989520633 8 0.30271677663648094 1.3534644615081817 9 0.2263754284814179 1.1386550438803222 >10 1.3610703306987506 13.98736021288224 >50 0.09163437626829275 3.485201528081725 >100 0.042129046771736775 4.310073857252702 >500 0.003901444811634362 1.5785284204323833 >1k 0.002275780051141324 2.2789601685745335 >5k 2.7092619556056954E-5 0.10344731803913257 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6832 0.10297540437289757 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.5072512349662993E-5 0.0 0.0 0.0 3.0145024699325986E-5 7 1.5072512349662993E-5 0.0 0.0 0.0 4.5217537048988984E-5 8 1.5072512349662993E-5 0.0 0.0 0.0 6.029004939865197E-5 9 1.5072512349662993E-5 0.0 0.0 0.0 9.043507409797797E-5 10 1.5072512349662993E-5 0.0 0.0 1.5072512349662993E-5 9.043507409797797E-5 11 1.5072512349662993E-5 0.0 0.0 1.5072512349662993E-5 1.0550758644764096E-4 12 1.5072512349662993E-5 0.0 0.0 1.5072512349662993E-5 1.0550758644764096E-4 13 1.5072512349662993E-5 0.0 0.0 1.5072512349662993E-5 1.0550758644764096E-4 14 1.5072512349662993E-5 0.0 0.0 1.5072512349662993E-5 1.8087014819595594E-4 15 1.5072512349662993E-5 1.5072512349662993E-5 0.0 3.0145024699325986E-5 1.959426605456189E-4 16 3.0145024699325986E-5 1.5072512349662993E-5 0.0 4.5217537048988984E-5 2.411601975946079E-4 17 3.0145024699325986E-5 1.5072512349662993E-5 0.0 4.5217537048988984E-5 2.562327099442709E-4 18 3.0145024699325986E-5 1.5072512349662993E-5 0.0 4.5217537048988984E-5 2.7130522229393386E-4 19 3.0145024699325986E-5 3.0145024699325986E-5 0.0 6.029004939865197E-5 2.7130522229393386E-4 20 3.0145024699325986E-5 3.0145024699325986E-5 0.0 7.536256174831497E-5 2.7130522229393386E-4 21 3.0145024699325986E-5 3.0145024699325986E-5 0.0 1.6579763584629293E-4 2.7130522229393386E-4 22 3.0145024699325986E-5 3.0145024699325986E-5 0.0 2.7130522229393386E-4 2.7130522229393386E-4 23 3.0145024699325986E-5 3.0145024699325986E-5 0.0 5.576829569375307E-4 3.4666778404224887E-4 24 3.0145024699325986E-5 3.0145024699325986E-5 0.0 8.742057162804536E-4 3.4666778404224887E-4 25 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.0010249308397770837 3.768128087415748E-4 26 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.0014318886732179845 3.918853210912378E-4 27 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.0042052309455559754 3.918853210912378E-4 28 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.009450465243238696 3.918853210912378E-4 29 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.017092229004517834 3.918853210912378E-4 30 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.03085343277976015 3.918853210912378E-4 31 3.0145024699325986E-5 4.5217537048988984E-5 0.0 0.09878524593969126 3.918853210912378E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGACG 1665 0.0 16.444445 4 AAGACGG 1650 0.0 15.248486 5 TATACTG 1195 0.0 14.861925 5 TAACGAA 675 0.0 14.251851 13 CGCTTCG 1000 0.0 14.245 32 TATACCG 325 0.0 14.230769 5 GTATTAG 1305 0.0 13.89272 1 CGCAAGA 1795 0.0 13.810585 2 GACGGAC 1760 0.0 13.664773 7 CGATAAC 665 0.0 13.631578 10 ACGGACC 1730 0.0 13.580924 8 AACGCTT 1000 0.0 13.505 30 ATAACGA 700 0.0 13.478572 12 TAGTACT 770 0.0 13.454545 4 TTATACT 1270 0.0 13.401575 4 GCGCAAG 1845 0.0 13.336043 1 GTAAACG 1055 0.0 13.327015 27 TCGTTAC 745 0.0 13.161074 23 CCGATAA 695 0.0 13.043165 9 CGAACGT 385 0.0 12.974026 4 >>END_MODULE