##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727254.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3313225 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46975077152925 31.0 31.0 34.0 30.0 34.0 2 31.687737476325935 31.0 31.0 34.0 30.0 34.0 3 31.86200212783617 31.0 31.0 34.0 30.0 34.0 4 35.58463128824635 37.0 35.0 37.0 33.0 37.0 5 35.380734178934425 37.0 35.0 37.0 33.0 37.0 6 35.385604358291395 37.0 35.0 37.0 33.0 37.0 7 35.27453583743935 37.0 35.0 37.0 32.0 37.0 8 35.233184586015135 37.0 35.0 37.0 32.0 37.0 9 36.750951716228144 39.0 35.0 39.0 32.0 39.0 10 36.55404688785096 38.0 35.0 39.0 32.0 39.0 11 36.59563627583397 38.0 35.0 39.0 32.0 39.0 12 36.42842577850885 38.0 35.0 39.0 32.0 39.0 13 36.40658210655781 38.0 35.0 39.0 32.0 39.0 14 37.38181952629236 39.0 36.0 41.0 32.0 41.0 15 37.299756883399105 39.0 36.0 41.0 32.0 41.0 16 37.20655282994665 39.0 36.0 40.0 31.0 41.0 17 37.52860581457643 39.0 36.0 41.0 32.0 41.0 18 37.55740917082299 39.0 36.0 41.0 32.0 41.0 19 37.617172090636764 39.0 37.0 41.0 32.0 41.0 20 37.57495974465966 39.0 37.0 41.0 32.0 41.0 21 37.513938534207604 39.0 36.0 41.0 32.0 41.0 22 37.445015958771286 39.0 36.0 41.0 32.0 41.0 23 37.312380837401626 39.0 36.0 41.0 31.0 41.0 24 37.17009892174543 39.0 36.0 41.0 31.0 41.0 25 37.086448098152104 39.0 36.0 41.0 31.0 41.0 26 36.76889435519773 39.0 36.0 41.0 30.0 41.0 27 36.574459929524856 39.0 36.0 40.0 30.0 41.0 28 36.355849663092606 39.0 35.0 40.0 29.0 41.0 29 36.1620819594202 39.0 35.0 40.0 28.0 41.0 30 36.009687540085565 39.0 35.0 40.0 27.0 41.0 31 35.851557319530066 38.0 35.0 40.0 27.0 41.0 32 35.68627877672057 38.0 35.0 40.0 26.0 41.0 33 35.50973417138891 38.0 34.0 40.0 26.0 41.0 34 35.37497604297927 38.0 34.0 40.0 25.0 41.0 35 35.20232401964853 38.0 34.0 40.0 25.0 41.0 36 35.09654188894506 38.0 34.0 40.0 24.0 41.0 37 35.00744531385583 38.0 34.0 40.0 24.0 41.0 38 34.891186985489966 38.0 33.0 40.0 24.0 41.0 39 34.7479857238793 38.0 33.0 40.0 23.0 41.0 40 34.6454134566774 38.0 33.0 40.0 23.0 41.0 41 34.41994220132952 38.0 33.0 40.0 22.0 41.0 42 34.23246172535822 38.0 33.0 40.0 21.0 41.0 43 33.95311788363301 38.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 7.0 12 21.0 13 21.0 14 40.0 15 83.0 16 172.0 17 354.0 18 673.0 19 1420.0 20 2663.0 21 5042.0 22 8739.0 23 13770.0 24 20697.0 25 28614.0 26 38258.0 27 50140.0 28 63220.0 29 78322.0 30 97311.0 31 118154.0 32 142242.0 33 170624.0 34 207385.0 35 254115.0 36 317617.0 37 412259.0 38 626154.0 39 655107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.0708901447985 19.627704125134876 12.036671219129397 27.264734510937227 2 20.52640554142867 22.016192682356316 31.99891344535913 25.45848833085589 3 19.858264983513045 23.844079409035004 28.938753027639237 27.35890257981272 4 15.486844388775287 15.764881648544845 32.76955232439692 35.97872163828294 5 14.067954938164476 38.12687034535838 33.493922084977626 14.31125263149952 6 36.477480400516114 35.789962951504954 13.92024387115273 13.812312776826206 7 30.15575458956153 30.620196334387188 20.054388096190266 19.16966097986101 8 28.21906148842895 34.33062952259505 18.48326026756408 18.967048721411917 9 28.178134596956138 13.447924605180752 16.92716311146994 41.44677768639317 10 16.69940918591403 26.60066853292487 32.69219567038157 24.007726610779528 11 38.7743361830241 21.020576628511495 19.584875763040543 20.62021142542387 12 22.275396328350777 24.619064506636285 28.446755049838146 24.658784115174793 13 31.400342566532608 19.086056636660658 23.433090116125527 26.080510680681208 14 23.486874570848645 19.827086901734713 22.891231353137805 33.79480717427884 15 26.273313765289107 27.314414203683725 20.246346082744154 26.165925948283018 16 26.443631205245644 25.31467075130726 22.416014608123504 25.825683435323587 17 25.532072225701548 25.558662632329526 23.027805235080624 25.881459906888303 18 25.884991209471135 24.50733047106671 23.905137743437287 25.70254057602487 19 26.465483026356495 24.703453583743933 23.52505489364592 25.30600849625365 20 26.051294433671117 23.895388933742804 23.61016834051415 26.44314829207192 21 26.338386315447938 24.5646160462993 23.726701325747573 25.370296312505186 22 26.552618672139683 23.904021006723056 23.17283009756355 26.370530223573706 23 25.749775520829406 23.961216035735575 23.60114390058025 26.687864542854772 24 25.854326222939882 24.455930400138836 23.396720717729703 26.29302265919157 25 26.50330116427348 23.709980457107502 23.140686189437783 26.646032189181234 26 26.314723569935637 24.36574636494654 23.38199186593123 25.937538199186594 27 26.887700050554976 24.159150072814253 22.96068030393348 25.992469572697296 28 26.15738442152284 24.48396954628798 23.228878207788483 26.129767824400695 29 26.13378204015725 24.487380120577384 23.532781504425447 25.846056334839922 30 26.367994929411676 24.53361905696112 23.362916795569273 25.735469218057933 31 26.681979038550054 23.94223151159369 23.19489319318791 26.18089625666835 32 25.96545661704231 24.233458337420487 23.091730866451872 26.70935417908533 33 25.893351643791167 23.817247545820162 23.463302371556413 26.826098438832258 34 26.568373714432315 24.009114986153975 23.775535920440056 25.646975378973657 35 26.670208029940618 23.90335700110919 23.714326675670986 25.712108293279208 36 26.11657825834346 24.125255604433747 23.749488791132507 26.00867734609029 37 26.346414746961045 23.822891593538017 23.92535973258683 25.90533392691411 38 26.111869854899684 23.467678772193256 24.028884244203155 26.391567128703908 39 26.234891985904973 23.576153143840216 23.959706932067697 26.22924793818711 40 26.46210263414045 23.366900829252465 24.222381516498277 25.948615020108807 41 25.479283779399225 23.81703627130666 24.60934587901516 26.094334070278958 42 26.14292720838458 23.604856295603227 24.651902602449276 25.60031389356292 43 25.58685268884546 22.864037305042668 24.538538734918394 27.010571271193474 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 51.5 2 60.0 3 74.5 4 89.0 5 89.0 6 122.0 7 155.0 8 189.0 9 223.0 10 300.0 11 377.0 12 377.0 13 763.0 14 1149.0 15 1808.0 16 2467.0 17 2455.5 18 2444.0 19 2444.0 20 3317.0 21 4190.0 22 5021.0 23 5852.0 24 7965.5 25 10079.0 26 10079.0 27 13322.5 28 16566.0 29 20809.5 30 25053.0 31 32126.0 32 39199.0 33 39199.0 34 49777.5 35 60356.0 36 76723.5 37 93091.0 38 113390.0 39 133689.0 40 133689.0 41 151846.5 42 170004.0 43 189372.0 44 208740.0 45 234854.0 46 260968.0 47 260968.0 48 290963.5 49 320959.0 50 329072.5 51 337186.0 52 328974.5 53 320763.0 54 320763.0 55 310409.0 56 300055.0 57 284512.5 58 268970.0 59 247634.5 60 226299.0 61 226299.0 62 196608.5 63 166918.0 64 144544.0 65 122170.0 66 102396.0 67 82622.0 68 82622.0 69 66552.0 70 50482.0 71 42359.0 72 34236.0 73 27043.5 74 19851.0 75 19851.0 76 15312.0 77 10773.0 78 8996.0 79 7219.0 80 5512.0 81 3805.0 82 3805.0 83 3112.0 84 2419.0 85 1953.5 86 1488.0 87 1324.5 88 1161.0 89 1161.0 90 794.5 91 428.0 92 361.0 93 294.0 94 268.5 95 243.0 96 243.0 97 138.0 98 33.0 99 45.0 100 57.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3313225.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.31669653166863 #Duplication Level Percentage of deduplicated Percentage of total 1 82.60884530074495 47.34866116934358 2 9.00611838528429 10.324019088352424 3 3.0875092451492394 5.308974913288207 4 1.4533765729751358 3.3321097591780964 5 0.8719969182919254 2.498999137114427 6 0.5751086588643022 1.9777997083716088 7 0.40546669860605805 1.6268008202390685 8 0.30713718347360086 1.408327099099825 9 0.23495806093500565 1.2120317888652925 >10 1.3329447600573174 13.748658165525592 >50 0.06830597788288438 2.683124571643389 >100 0.04084654292806919 4.63670257591947 >500 0.005328251255712802 2.0428691164367385 >1k 0.002057443551499653 1.8509220866223597 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.036414671505859E-5 2 0.0 0.0 0.0 0.0 6.036414671505859E-5 3 0.0 0.0 0.0 0.0 6.036414671505859E-5 4 0.0 0.0 0.0 0.0 6.036414671505859E-5 5 0.0 0.0 0.0 0.0 6.036414671505859E-5 6 0.0 0.0 0.0 0.0 9.054622007258789E-5 7 0.0 0.0 0.0 0.0 9.054622007258789E-5 8 0.0 0.0 0.0 0.0 9.054622007258789E-5 9 0.0 0.0 0.0 0.0 2.1127451350270508E-4 10 0.0 0.0 0.0 0.0 2.1127451350270508E-4 11 0.0 0.0 0.0 0.0 2.1127451350270508E-4 12 0.0 0.0 0.0 0.0 2.1127451350270508E-4 13 0.0 3.0182073357529297E-5 0.0 0.0 2.4145658686023437E-4 14 0.0 3.0182073357529297E-5 0.0 0.0 3.3200280693282223E-4 15 0.0 3.0182073357529297E-5 0.0 0.0 3.6218488029035156E-4 16 3.0182073357529297E-5 3.0182073357529297E-5 0.0 3.0182073357529297E-5 5.13095247077998E-4 17 3.0182073357529297E-5 3.0182073357529297E-5 0.0 3.0182073357529297E-5 5.432773204355273E-4 18 3.0182073357529297E-5 3.0182073357529297E-5 0.0 3.0182073357529297E-5 6.036414671505859E-4 19 3.0182073357529297E-5 3.0182073357529297E-5 0.0 3.0182073357529297E-5 6.036414671505859E-4 20 3.0182073357529297E-5 3.0182073357529297E-5 0.0 6.036414671505859E-5 6.036414671505859E-4 21 3.0182073357529297E-5 3.0182073357529297E-5 0.0 1.5091036678764648E-4 6.338235405081152E-4 22 3.0182073357529297E-5 3.0182073357529297E-5 0.0 3.0182073357529297E-4 6.338235405081152E-4 23 3.0182073357529297E-5 3.0182073357529297E-5 0.0 4.527311003629394E-4 7.847339072957617E-4 24 3.0182073357529297E-5 3.0182073357529297E-5 0.0 6.338235405081152E-4 7.847339072957617E-4 25 3.0182073357529297E-5 3.0182073357529297E-5 0.0 8.149159806532909E-4 7.847339072957617E-4 26 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.0014487395211614062 8.450980540108203E-4 27 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.003923669536478809 8.450980540108203E-4 28 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.008330252246678086 8.450980540108203E-4 29 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.01578522436598782 8.450980540108203E-4 30 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.029065336643300712 8.450980540108203E-4 31 3.0182073357529297E-5 3.0182073357529297E-5 0.0 0.09296078594119023 8.450980540108203E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 75 2.0687468E-4 17.266666 3 TAGTACT 270 0.0 16.444445 4 ATTAGAG 400 0.0 15.724999 3 TTAGAGT 440 0.0 15.136364 4 GTATTAC 185 3.0559022E-10 15.0 1 TAGAGTG 520 0.0 14.9423065 5 AAGACGG 790 0.0 14.753164 5 AATTAAC 435 0.0 14.459769 2 CAAGACG 820 0.0 14.439024 4 TCTTATA 975 0.0 14.420514 37 CTTAGCG 130 4.449759E-6 14.230768 3 GCGATTC 210 1.364242E-10 14.095239 13 CTAGTAC 265 0.0 13.962264 3 GTCTTAG 385 0.0 13.935066 1 CGCTTCG 465 0.0 13.924731 32 TAGACCG 160 1.7864295E-7 13.875001 5 AACGCTT 480 0.0 13.875001 30 GTTAGAC 310 0.0 13.725806 3 GTAAACG 445 0.0 13.719102 27 CGAGCCG 715 0.0 13.454546 15 >>END_MODULE