##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727253.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4032814 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.474424310171507 31.0 31.0 34.0 30.0 34.0 2 31.68488851705038 31.0 31.0 34.0 30.0 34.0 3 31.858474008471504 31.0 31.0 34.0 30.0 34.0 4 35.57889577848123 37.0 35.0 37.0 33.0 37.0 5 35.37218155858415 37.0 35.0 37.0 33.0 37.0 6 35.383270589717256 37.0 35.0 37.0 33.0 37.0 7 35.27623639473578 37.0 35.0 37.0 32.0 37.0 8 35.23895746245674 37.0 35.0 37.0 32.0 37.0 9 36.762473300281144 39.0 35.0 39.0 32.0 39.0 10 36.54748867664117 38.0 35.0 39.0 32.0 39.0 11 36.61254573109496 38.0 35.0 39.0 32.0 39.0 12 36.43463001269089 38.0 35.0 39.0 32.0 39.0 13 36.4270544091545 38.0 35.0 39.0 32.0 39.0 14 37.387264327092694 39.0 36.0 41.0 32.0 41.0 15 37.31279573022708 39.0 36.0 41.0 32.0 41.0 16 37.20987404824522 39.0 36.0 40.0 31.0 41.0 17 37.538835165718034 39.0 36.0 41.0 32.0 41.0 18 37.56451152966638 39.0 36.0 41.0 32.0 41.0 19 37.632859586383105 39.0 37.0 41.0 32.0 41.0 20 37.59055413911973 39.0 37.0 41.0 32.0 41.0 21 37.535844698019794 39.0 37.0 41.0 32.0 41.0 22 37.4698798407266 39.0 36.0 41.0 32.0 41.0 23 37.335133730442315 39.0 36.0 41.0 31.0 41.0 24 37.19758684630633 39.0 36.0 41.0 31.0 41.0 25 37.105149158875165 39.0 36.0 41.0 31.0 41.0 26 36.79306186697428 39.0 36.0 41.0 30.0 41.0 27 36.59353419225385 39.0 36.0 40.0 30.0 41.0 28 36.3604505439626 39.0 35.0 40.0 29.0 41.0 29 36.16741610200718 39.0 35.0 40.0 28.0 41.0 30 36.02321902274689 39.0 35.0 40.0 27.0 41.0 31 35.85171272466322 38.0 35.0 40.0 27.0 41.0 32 35.68451582443426 38.0 35.0 40.0 26.0 41.0 33 35.505420532660324 38.0 34.0 40.0 26.0 41.0 34 35.36250543665044 38.0 34.0 40.0 25.0 41.0 35 35.18092503150405 38.0 34.0 40.0 25.0 41.0 36 35.06837235736634 38.0 34.0 40.0 24.0 41.0 37 34.98245865046094 38.0 34.0 40.0 24.0 41.0 38 34.853356490034 38.0 33.0 40.0 24.0 41.0 39 34.691557061644794 38.0 33.0 40.0 23.0 41.0 40 34.59339260377493 38.0 33.0 40.0 23.0 41.0 41 34.359968498423186 38.0 33.0 40.0 22.0 41.0 42 34.17779148753203 38.0 33.0 40.0 21.0 41.0 43 33.89402784259329 38.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 12.0 11 16.0 12 30.0 13 47.0 14 71.0 15 132.0 16 242.0 17 517.0 18 949.0 19 1783.0 20 3521.0 21 6186.0 22 10737.0 23 17047.0 24 25118.0 25 34482.0 26 46135.0 27 60512.0 28 77701.0 29 95232.0 30 117612.0 31 143332.0 32 172751.0 33 208092.0 34 252746.0 35 309251.0 36 388068.0 37 502496.0 38 766639.0 39 791354.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.02988632751226 19.822064692296742 12.175319764313453 26.97272921587755 2 20.227017660621094 22.307351640814577 32.42557182156182 25.040058877002508 3 19.63192450730433 24.34287819869699 29.371401706103978 26.653795587894706 4 15.19264216004011 15.877325361397773 33.50040443224012 35.429628046322 5 13.763813555497476 38.6400910133718 33.62128776581315 13.974807665317568 6 35.774002966662984 36.38637933710803 14.262671176999483 13.576946519229502 7 29.646643757931805 31.217755145662558 20.4026270490035 18.732974047402138 8 27.91118062970422 34.752879750962975 18.794519162054087 18.541420457278715 9 28.422039796529177 13.549620686696684 17.113137377523486 40.91520213925065 10 16.477948152332342 26.885594029379984 32.74200099483884 23.894456823448838 11 38.51298373790609 21.329597645713392 19.7674626203936 20.389955995986924 12 22.091869349789008 25.000334753846822 28.523557000149275 24.384238896214903 13 31.022531661514762 19.266943627948127 23.694546785445596 26.01597792509151 14 23.226635297338287 20.14407309635406 23.232536883674772 33.396754722632885 15 26.14283723474477 27.715337231025284 20.419463927669366 25.72236160656058 16 26.03849322086265 25.681422450923847 22.798224763155453 25.481859565058045 17 25.119531919895138 25.784848991299867 23.27503822392999 25.820580864874998 18 25.646831220086025 24.892395235684063 24.175848427425613 25.284925116804295 19 26.406201724155885 24.909132928024945 23.720434416266162 24.964230931553004 20 25.691489862909624 24.162061528252977 23.81862887799933 26.32781973083807 21 26.202522605803292 24.902785003226036 23.99825531254355 24.896437078427123 22 26.287029354688812 24.130371497420906 23.40556742760762 26.177031720282663 23 25.23466244661916 24.144753514543442 24.153035572679524 26.467548466157876 24 25.47355271034072 24.61888894454344 23.824976802798243 26.082581542317595 25 26.150821733905904 23.891605216605576 23.47403078842714 26.483542261061384 26 26.025400625964895 24.660819963430004 23.707688973505846 25.606090437099255 27 26.780530914641737 24.40782044497961 23.190333102394504 25.621315537984145 28 25.672743647487835 25.04705151291381 23.35808197452201 25.922122865076346 29 25.820655254618735 24.95894925974766 23.82510078570447 25.39529469992913 30 26.34981429840305 24.76446967303724 23.541899031296758 25.34381699726295 31 26.53432565945268 24.28108511823258 23.40016177289605 25.784427449418697 32 25.649434861116827 24.60225043852754 23.259862716207593 26.488451984148043 33 25.531700693362 23.949108488514472 23.79933713779014 26.719853680333383 34 26.392042876264565 24.301244738785375 24.07328976739319 25.233422617556872 35 26.557634445823687 24.140786061544123 23.877074419995566 25.424505072636627 36 25.883489791495467 24.454710780115324 24.036590827149478 25.62520860123973 37 26.09453349447805 24.24503088910126 24.288276126793846 25.372159489626846 38 26.16961754249018 23.566422850148804 24.241013842939445 26.022945764421568 39 26.043675706343016 23.91848471067597 24.14857218805529 25.889267394925724 40 26.524704585929328 23.53961774582215 24.42455813732049 25.511119530928035 41 25.23215799191334 24.303823583234934 24.689807166906284 25.774211257945446 42 26.240783730665484 24.00990970572905 24.716141136189272 25.033165427416193 43 25.42090956835599 23.326987061639837 24.492004838308933 26.760098531695238 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 63.0 1 73.0 2 83.0 3 103.5 4 124.0 5 124.0 6 182.0 7 240.0 8 282.5 9 325.0 10 491.0 11 657.0 12 657.0 13 1341.0 14 2025.0 15 3131.0 16 4237.0 17 4197.0 18 4157.0 19 4157.0 20 5530.5 21 6904.0 22 8264.5 23 9625.0 24 12775.5 25 15926.0 26 15926.0 27 20806.0 28 25686.0 29 31736.5 30 37787.0 31 47275.5 32 56764.0 33 56764.0 34 71191.0 35 85618.0 36 106733.5 37 127849.0 38 153413.5 39 178978.0 40 178978.0 41 198630.0 42 218282.0 43 238722.5 44 259163.0 45 288869.5 46 318576.0 47 318576.0 48 356497.5 49 394419.0 50 400217.5 51 406016.0 52 392143.0 53 378270.0 54 378270.0 55 363207.0 56 348144.0 57 329873.5 58 311603.0 59 286427.5 60 261252.0 61 261252.0 62 224920.5 63 188589.0 64 163036.5 65 137484.0 66 115609.5 67 93735.0 68 93735.0 69 76135.5 70 58536.0 71 49947.0 72 41358.0 73 32852.5 74 24347.0 75 24347.0 76 18802.0 77 13257.0 78 11183.5 79 9110.0 80 6970.5 81 4831.0 82 4831.0 83 3994.0 84 3157.0 85 2640.5 86 2124.0 87 1950.0 88 1776.0 89 1776.0 90 1221.5 91 667.0 92 567.5 93 468.0 94 446.5 95 425.0 96 425.0 97 247.5 98 70.0 99 88.5 100 107.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4032814.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.87566191864454 #Duplication Level Percentage of deduplicated Percentage of total 1 82.35934357734779 45.195234939920255 2 9.01170167261233 9.890461885959153 3 3.2120356337371536 5.287877445227975 4 1.4973805178147246 3.286789882366628 5 0.9077035977927941 2.490541787740733 6 0.5877800725617307 1.9352892326648334 7 0.403397446256931 1.5495691315747946 8 0.30175424912634535 1.3247171326057412 9 0.23513245939554192 1.1612744413100253 >10 1.3513477783217764 13.47201791862758 >50 0.07540263092574957 2.8278735908106976 >100 0.04602602984130035 5.122019494537429 >500 0.007284312051584901 2.900163348105683 >1k 0.0037100222144740625 3.556169768548586 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4470 0.11084071816850466 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.4796581245750486E-5 2 0.0 0.0 0.0 0.0 2.4796581245750486E-5 3 0.0 0.0 0.0 0.0 2.4796581245750486E-5 4 0.0 0.0 0.0 2.4796581245750486E-5 4.959316249150097E-5 5 0.0 0.0 0.0 2.4796581245750486E-5 4.959316249150097E-5 6 0.0 0.0 0.0 2.4796581245750486E-5 1.2398290622875243E-4 7 0.0 0.0 0.0 2.4796581245750486E-5 1.2398290622875243E-4 8 0.0 0.0 0.0 2.4796581245750486E-5 1.487794874745029E-4 9 0.0 0.0 0.0 4.959316249150097E-5 3.223555561947563E-4 10 0.0 0.0 0.0 7.438974373725145E-5 3.223555561947563E-4 11 0.0 0.0 0.0 7.438974373725145E-5 3.471521374405068E-4 12 0.0 0.0 0.0 9.918632498300194E-5 3.471521374405068E-4 13 0.0 0.0 0.0 9.918632498300194E-5 3.471521374405068E-4 14 0.0 0.0 0.0 9.918632498300194E-5 3.967452999320078E-4 15 0.0 0.0 0.0 1.2398290622875243E-4 3.967452999320078E-4 16 0.0 0.0 0.0 1.2398290622875243E-4 5.207282061607602E-4 17 0.0 0.0 0.0 1.487794874745029E-4 5.207282061607602E-4 18 0.0 0.0 0.0 1.487794874745029E-4 5.703213686522612E-4 19 0.0 0.0 0.0 2.2316923121175436E-4 5.703213686522612E-4 20 0.0 0.0 0.0 2.7276239370325534E-4 5.703213686522612E-4 21 0.0 0.0 0.0 3.471521374405068E-4 6.199145311437622E-4 22 0.0 0.0 0.0 4.7113504366925926E-4 6.199145311437622E-4 23 0.0 0.0 0.0 7.934905998640156E-4 7.191008561267641E-4 24 0.0 0.0 0.0 0.0010910495748130214 7.438974373725146E-4 25 0.0 0.0 0.0 0.0012398290622875243 8.182871811097661E-4 26 0.0 0.0 0.0 0.0017109641059567834 8.182871811097661E-4 27 0.0 0.0 0.0 0.003620300861879571 8.182871811097661E-4 28 0.0 0.0 0.0 0.007538160698708148 8.182871811097661E-4 29 0.0 0.0 0.0 0.01428283079755228 8.182871811097661E-4 30 0.0 0.0 0.0 0.024945360733224987 8.182871811097661E-4 31 0.0 0.0 0.0 0.07969621212384206 8.430837623555165E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1185 0.0 18.265823 5 CAAGACG 1220 0.0 17.590162 4 CGCTATA 65 0.0015808635 17.076923 14 TTAGAGT 620 0.0 17.008064 4 ACGGACC 1225 0.0 16.008163 8 GACGGAC 1290 0.0 15.775193 7 CGGACCA 1325 0.0 15.079245 9 TTATCTA 740 0.0 14.75 4 GCGCAAG 1440 0.0 14.517361 1 AGACGGA 1440 0.0 14.517361 6 TAAACGC 640 0.0 14.453125 28 GTATTAG 935 0.0 14.44385 1 TAGAGTG 615 0.0 14.439025 5 ATTAGAG 590 0.0 14.423729 3 TATACCG 180 3.3378456E-9 14.388888 5 AGGTTAT 770 0.0 14.175324 1 CGCTTCG 630 0.0 14.095238 32 CGAACGA 670 0.0 14.082089 16 GCGAAAG 1430 0.0 13.972027 18 CGCAAGA 1460 0.0 13.938357 2 >>END_MODULE