##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727251.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4645255 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48668307767819 31.0 31.0 34.0 30.0 34.0 2 31.70089133965735 31.0 31.0 34.0 30.0 34.0 3 31.872336394880367 31.0 31.0 34.0 30.0 34.0 4 35.593569782498484 37.0 35.0 37.0 33.0 37.0 5 35.38558033950773 37.0 35.0 37.0 33.0 37.0 6 35.394910074904395 37.0 35.0 37.0 33.0 37.0 7 35.290283525877484 37.0 35.0 37.0 32.0 37.0 8 35.249845487492074 37.0 35.0 37.0 32.0 37.0 9 36.77414070917528 39.0 35.0 39.0 32.0 39.0 10 36.57628332567319 38.0 35.0 39.0 32.0 39.0 11 36.626354634998506 39.0 35.0 39.0 32.0 39.0 12 36.459903708192556 38.0 35.0 39.0 32.0 39.0 13 36.44135897814006 38.0 35.0 39.0 32.0 39.0 14 37.41512941700725 39.0 36.0 41.0 32.0 41.0 15 37.33899086271905 39.0 36.0 41.0 32.0 41.0 16 37.24416657427848 39.0 36.0 41.0 31.0 41.0 17 37.568234036667526 39.0 36.0 41.0 32.0 41.0 18 37.59962693113726 39.0 36.0 41.0 32.0 41.0 19 37.672329075583576 40.0 37.0 41.0 32.0 41.0 20 37.632827907187014 39.0 37.0 41.0 32.0 41.0 21 37.58325323367608 39.0 37.0 41.0 32.0 41.0 22 37.515931633462536 39.0 37.0 41.0 32.0 41.0 23 37.391189288854974 39.0 36.0 41.0 31.0 41.0 24 37.26388432927794 39.0 36.0 41.0 31.0 41.0 25 37.176612263481765 39.0 36.0 41.0 31.0 41.0 26 36.87956742955984 39.0 36.0 41.0 30.0 41.0 27 36.68941166846599 39.0 36.0 40.0 30.0 41.0 28 36.47571145179328 39.0 36.0 40.0 30.0 41.0 29 36.30108056500666 39.0 35.0 40.0 29.0 41.0 30 36.15880484494393 39.0 35.0 40.0 28.0 41.0 31 35.99834390146504 39.0 35.0 40.0 27.0 41.0 32 35.84806151653677 38.0 35.0 40.0 27.0 41.0 33 35.674812254655556 38.0 35.0 40.0 26.0 41.0 34 35.54707782457583 38.0 34.0 40.0 26.0 41.0 35 35.38628213090562 38.0 34.0 40.0 25.0 41.0 36 35.28141361453785 38.0 34.0 40.0 25.0 41.0 37 35.2037317649946 38.0 34.0 40.0 25.0 41.0 38 35.08512729656391 38.0 34.0 40.0 24.0 41.0 39 34.93761634183699 38.0 34.0 40.0 24.0 41.0 40 34.84993288850666 38.0 33.0 40.0 24.0 41.0 41 34.631345103767174 38.0 33.0 40.0 23.0 41.0 42 34.45533237680171 38.0 33.0 40.0 23.0 41.0 43 34.179077359585214 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 16.0 12 24.0 13 45.0 14 78.0 15 147.0 16 254.0 17 470.0 18 939.0 19 1853.0 20 3482.0 21 6564.0 22 11191.0 23 17900.0 24 26863.0 25 37163.0 26 50031.0 27 65837.0 28 84703.0 29 105882.0 30 131305.0 31 160964.0 32 195537.0 33 235916.0 34 289190.0 35 353850.0 36 446552.0 37 580400.0 38 891310.0 39 946781.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.841460802474785 19.986287082194625 12.243956467405988 26.928295647924607 2 20.049728163470036 22.190321091091878 32.786983707030075 24.972967038408008 3 19.469673893037086 24.324972471909508 29.423121012732345 26.782232622321057 4 15.181685397249451 15.890796091926063 33.56190349076638 35.3656150200581 5 13.743314414386292 38.52505406054135 33.697288953997145 14.034342571075214 6 35.65987227827105 36.471539237350804 14.25441660360949 13.614171880768655 7 29.644163775723833 31.1585908631496 20.44479797126315 18.75244738986342 8 27.795180243065236 35.06233780492137 18.711566964569222 18.430914987444176 9 28.25834103832836 13.620996048656101 17.179616619539722 40.941046293475814 10 16.344140418556137 27.007257943858843 32.943056947358116 23.70554469022691 11 38.29447468438224 21.386511612387263 19.990549496206345 20.328464207024158 12 21.975392093652555 24.863629660804413 28.83615646503798 24.324821780505054 13 30.973778619257715 19.430472600535385 23.83128590357257 25.76446287663433 14 23.117310029266424 20.068306260904944 23.467086306349167 33.347297403479466 15 25.937736464413685 27.75748586460808 20.584252102414183 25.72052556856405 16 25.833737867996483 25.884951418167574 22.821244474200018 25.460066239635932 17 25.106070603228453 25.895542871166384 23.43001622085332 25.568370304751838 18 25.40146881064656 25.14639131759182 24.277461624819306 25.17467824694231 19 26.221294632910357 24.986507737465434 23.958254175497363 24.833943454126846 20 25.545120773778834 24.328330737494497 24.00481781947385 26.12173066925282 21 25.962794292240147 24.97253649153814 24.200501371829965 24.864167844391748 22 26.132085321473202 24.223341883276593 23.630414261434517 26.01415853381569 23 25.215128125366636 24.367941049522575 24.272338117067846 26.14459270804294 24 25.41081167772275 24.679786147369736 23.954852855225386 25.95454931968213 25 26.020810482955188 24.088171693480767 23.65125272993625 26.2397650936278 26 25.867729543372754 24.653113768781264 23.970072687075305 25.509084000770677 27 26.542073578307328 24.614859679393273 23.312240124600265 25.530826617699137 28 25.543958297230184 25.080496119158152 23.583936726832004 25.791608856779657 29 25.70799665465082 25.006011510670568 24.00927397957701 25.276717855101605 30 26.18456898491041 24.855707598398798 23.644277870644345 25.31544554604645 31 26.259225812145942 24.38421572120368 23.77884529482235 25.577713171828027 32 25.605160534782268 24.697524678408396 23.490615692787586 26.20669909402175 33 25.47718047771328 24.150148915398617 23.89203606691129 26.480634539976815 34 26.154280012615022 24.437431314319667 24.238023531539174 25.170265141526137 35 26.333710420633526 24.33244246010176 23.983376585354304 25.350470533910407 36 25.750685376798476 24.51770677820701 24.225559199656423 25.50604864533809 37 25.863596293422 24.334487557733645 24.48931221213905 25.3126039367053 38 26.012414818992713 23.768103150419083 24.38966213910754 25.82981989148066 39 25.781706278772642 24.142076161588548 24.41691575597034 25.659301803668477 40 26.263423644127183 23.762419931736794 24.57608893376144 25.398067490374586 41 25.096232607251917 24.424514908223554 24.815429938722417 25.663822545802113 42 25.840153016357554 24.21098518811131 24.86354355143044 25.0853182441007 43 25.158597321352648 23.61489304677569 24.758705388616985 26.467804243254676 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 100.0 1 114.5 2 129.0 3 145.0 4 161.0 5 161.0 6 231.0 7 301.0 8 387.0 9 473.0 10 678.5 11 884.0 12 884.0 13 1857.0 14 2830.0 15 4461.0 16 6092.0 17 6004.0 18 5916.0 19 5916.0 20 7879.0 21 9842.0 22 11281.0 23 12720.0 24 16761.5 25 20803.0 26 20803.0 27 27094.0 28 33385.0 29 40748.0 30 48111.0 31 59375.0 32 70639.0 33 70639.0 34 87414.5 35 104190.0 36 128511.5 37 152833.0 38 180193.5 39 207554.0 40 207554.0 41 230915.5 42 254277.0 43 278078.5 44 301880.0 45 335729.0 46 369578.0 47 369578.0 48 406895.0 49 444212.0 50 452617.0 51 461022.0 52 448266.5 53 435511.0 54 435511.0 55 418645.5 56 401780.0 57 378567.0 58 355354.0 59 326094.0 60 296834.0 61 296834.0 62 255723.5 63 214613.0 64 184751.0 65 154889.0 66 129303.5 67 103718.0 68 103718.0 69 84034.0 70 64350.0 71 54644.0 72 44938.0 73 35577.0 74 26216.0 75 26216.0 76 20391.5 77 14567.0 78 12319.5 79 10072.0 80 7778.5 81 5485.0 82 5485.0 83 4489.5 84 3494.0 85 2781.5 86 2069.0 87 1907.5 88 1746.0 89 1746.0 90 1220.5 91 695.0 92 555.5 93 416.0 94 411.0 95 406.0 96 406.0 97 241.5 98 77.0 99 85.0 100 93.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4645255.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.8243766598264 #Duplication Level Percentage of deduplicated Percentage of total 1 80.87794433423804 42.72326994984263 2 9.4281297269125 9.960701517842642 3 3.450373232272825 5.467914457156872 4 1.6790369161177388 3.5477631393102707 5 1.0392499177555905 2.744886454960746 6 0.6740942431192655 2.1365164921651605 7 0.4766791929681636 1.7626196864676642 8 0.3375010488232598 1.4262626020901068 9 0.265574627345499 1.2625932731572505 >10 1.6166533597759456 15.755510676453275 >50 0.0977609003925961 3.526584045738501 >100 0.04805733815824838 4.849573072512443 >500 0.006208514849353969 2.3390516999955384 >1k 0.002736647271191205 2.4967529323069964 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.610937397408754E-5 2 0.0 0.0 0.0 0.0 8.610937397408754E-5 3 0.0 0.0 0.0 0.0 8.610937397408754E-5 4 0.0 0.0 0.0 0.0 1.0763671746760942E-4 5 0.0 2.1527343493521884E-5 0.0 0.0 1.0763671746760942E-4 6 0.0 2.1527343493521884E-5 0.0 0.0 1.7221874794817507E-4 7 0.0 2.1527343493521884E-5 0.0 0.0 1.7221874794817507E-4 8 0.0 2.1527343493521884E-5 0.0 0.0 1.7221874794817507E-4 9 0.0 2.1527343493521884E-5 0.0 2.1527343493521884E-5 2.3680077842874072E-4 10 0.0 2.1527343493521884E-5 0.0 4.305468698704377E-5 2.3680077842874072E-4 11 0.0 2.1527343493521884E-5 0.0 6.458203048056565E-5 2.3680077842874072E-4 12 0.0 2.1527343493521884E-5 0.0 6.458203048056565E-5 2.3680077842874072E-4 13 0.0 2.1527343493521884E-5 0.0 8.610937397408754E-5 2.583281219222626E-4 14 0.0 2.1527343493521884E-5 0.0 1.0763671746760942E-4 3.6596483938987204E-4 15 0.0 2.1527343493521884E-5 0.0 1.506914044546532E-4 3.874921828833939E-4 16 0.0 2.1527343493521884E-5 0.0 1.7221874794817507E-4 4.520742133639596E-4 17 0.0 2.1527343493521884E-5 0.0 2.1527343493521885E-4 4.520742133639596E-4 18 0.0 2.1527343493521884E-5 0.0 2.3680077842874072E-4 5.381835873380471E-4 19 0.0 2.1527343493521884E-5 0.0 2.583281219222626E-4 5.381835873380471E-4 20 0.0 2.1527343493521884E-5 0.0 2.798554654157845E-4 5.381835873380471E-4 21 0.0 2.1527343493521884E-5 0.0 3.2291015240282824E-4 5.59710930831569E-4 22 0.0 2.1527343493521884E-5 0.0 4.7360155685748144E-4 5.59710930831569E-4 23 0.0 2.1527343493521884E-5 0.0 6.673476482991784E-4 7.104023352862221E-4 24 0.0 2.1527343493521884E-5 0.0 0.001097894518169616 7.319296787797441E-4 25 0.0 2.1527343493521884E-5 0.0 0.0011840038921437036 7.319296787797441E-4 26 0.0 2.1527343493521884E-5 0.0 0.0015499687315335756 7.534570222732659E-4 27 0.0 2.1527343493521884E-5 0.0 0.003961031202808027 7.534570222732659E-4 28 0.0 2.1527343493521884E-5 0.0 0.008546355366928188 7.534570222732659E-4 29 0.0 2.1527343493521884E-5 0.0 0.01621008965062198 7.749843657667878E-4 30 0.0 2.1527343493521884E-5 0.0 0.027339726236772794 7.749843657667878E-4 31 0.0 2.1527343493521884E-5 0.0 0.0879391981710369 7.749843657667878E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 320 0.0 19.078125 4 TAACGTA 80 3.385336E-4 16.1875 4 TATACTG 590 0.0 15.991526 5 TCTTATA 1075 0.0 15.316279 37 TCGTTAC 880 0.0 14.926136 23 TATCTAG 915 0.0 14.759563 1 TTAGAGT 560 0.0 14.535715 4 TAATACT 655 0.0 14.404579 4 TCGAACG 400 0.0 14.337501 3 AAGACGG 1020 0.0 13.965686 5 TAGATCG 120 3.3046097E-5 13.874999 5 TAGAGTG 655 0.0 13.839694 5 CTCTTAC 790 0.0 13.582278 1 TACGGAT 1460 0.0 13.55822 27 GTATTAG 975 0.0 13.471795 1 CAAGACG 1105 0.0 13.226245 4 TAGACAG 940 0.0 13.186171 5 CGTTACG 740 0.0 13.0 24 GTTACGG 1110 0.0 13.0 25 CTCTATA 285 0.0 12.982456 2 >>END_MODULE