##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727249.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5354687 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49406211791651 31.0 31.0 34.0 30.0 34.0 2 31.7034241217087 31.0 31.0 34.0 30.0 34.0 3 31.87623235494437 31.0 31.0 34.0 30.0 34.0 4 35.595399133506774 37.0 35.0 37.0 33.0 37.0 5 35.39433266594294 37.0 35.0 37.0 33.0 37.0 6 35.401493121820195 37.0 35.0 37.0 33.0 37.0 7 35.30040840855871 37.0 35.0 37.0 32.0 37.0 8 35.261946029711915 37.0 35.0 37.0 32.0 37.0 9 36.782815316749605 39.0 37.0 39.0 32.0 39.0 10 36.59032470058474 39.0 35.0 39.0 32.0 39.0 11 36.6444522340895 39.0 35.0 39.0 32.0 39.0 12 36.4753715763405 38.0 35.0 39.0 32.0 39.0 13 36.467417423277965 38.0 35.0 39.0 32.0 39.0 14 37.42883757724775 39.0 36.0 41.0 32.0 41.0 15 37.36498828036074 39.0 36.0 41.0 32.0 41.0 16 37.26214324011843 39.0 36.0 41.0 31.0 41.0 17 37.584565260303734 39.0 36.0 41.0 32.0 41.0 18 37.61371224872714 39.0 36.0 41.0 32.0 41.0 19 37.68638372326898 40.0 37.0 41.0 32.0 41.0 20 37.63896956068581 40.0 37.0 41.0 32.0 41.0 21 37.58453425942543 39.0 37.0 41.0 32.0 41.0 22 37.51531900930904 39.0 37.0 41.0 32.0 41.0 23 37.384694941086195 39.0 36.0 41.0 31.0 41.0 24 37.24250362346109 39.0 36.0 41.0 31.0 41.0 25 37.14746669599923 39.0 36.0 41.0 31.0 41.0 26 36.843047595499044 39.0 36.0 41.0 30.0 41.0 27 36.651044402782084 39.0 36.0 41.0 30.0 41.0 28 36.40931001195775 39.0 35.0 40.0 29.0 41.0 29 36.223888529805755 39.0 35.0 40.0 29.0 41.0 30 36.0797592837826 39.0 35.0 40.0 27.0 41.0 31 35.91823144844881 39.0 35.0 40.0 27.0 41.0 32 35.746210189316386 38.0 35.0 40.0 27.0 41.0 33 35.56940433679877 38.0 34.0 40.0 26.0 41.0 34 35.431554449401055 38.0 34.0 40.0 25.0 41.0 35 35.245044388215405 38.0 34.0 40.0 25.0 41.0 36 35.12456246275459 38.0 34.0 40.0 24.0 41.0 37 35.04751370154782 38.0 34.0 40.0 24.0 41.0 38 34.91485515399873 38.0 34.0 40.0 24.0 41.0 39 34.75113876870861 38.0 33.0 40.0 23.0 41.0 40 34.65288241871094 38.0 33.0 40.0 23.0 41.0 41 34.4184009261419 38.0 33.0 40.0 22.0 41.0 42 34.239184475208354 38.0 33.0 40.0 21.0 41.0 43 33.97084572823771 38.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 10.0 11 22.0 12 48.0 13 62.0 14 107.0 15 196.0 16 354.0 17 688.0 18 1235.0 19 2460.0 20 4664.0 21 8129.0 22 13603.0 23 22062.0 24 32327.0 25 45025.0 26 60315.0 27 78471.0 28 100225.0 29 124395.0 30 152531.0 31 187278.0 32 227718.0 33 272657.0 34 333201.0 35 407341.0 36 514241.0 37 665805.0 38 1020369.0 39 1079145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.045218889544806 19.833895053062857 12.17115024650367 26.949735810888665 2 20.153278800422882 22.18323872151631 32.70217288144013 24.96130959662068 3 19.503885101033916 24.307769996640328 29.575921057570685 26.612423844755074 4 14.96569267260626 15.79401373040105 33.90730401235404 35.33298958463865 5 13.710269152986907 38.750799066313306 33.592420994915294 13.946510785784492 6 35.576663958136116 36.720278888383206 14.323619662549838 13.379437490930842 7 29.59444688363671 31.45205312654129 20.391500007376713 18.561999982445286 8 27.903610425782123 34.97520956873856 18.77353428874554 18.34764571673377 9 28.50663353432236 13.511956908032161 17.0993001084844 40.88210944916108 10 16.292866417775677 26.9206211306095 32.67457089461999 24.111941556994836 11 38.571199399703474 21.29412979694238 19.936590131225223 20.19808067212892 12 22.118006150499554 24.884573085224215 28.54710275315812 24.45031801111811 13 30.85534224502758 19.215651633792973 23.835622885147163 26.093383236032285 14 23.07352418544725 20.14870336959004 23.292397856307943 33.48537458865476 15 25.93412089259372 27.870928776976132 20.485006873417625 25.709943457012518 16 25.95471966895544 25.794336811843532 22.766876943507622 25.484066575693408 17 25.049213894294848 25.786157062028085 23.20624903005535 25.958380013621714 18 25.412596478561678 25.051454921641547 24.2596812848258 25.27626731497098 19 26.563625474280755 24.736048997821907 23.674997250072693 25.02532827782464 20 25.625251298535286 24.07630922218236 23.698752139947675 26.599687339334682 21 26.37050494267919 24.78710707087081 24.12587327700013 24.71651470944987 22 26.36337100562554 24.000823951054468 23.427102275072286 26.208702768247704 23 25.33251710137306 24.059800320728364 24.27561125421523 26.332071323683344 24 25.383836627612403 24.326146420883237 24.05160189568503 26.23841505581932 25 26.127073347144286 23.82923595720908 23.580108417167988 26.463582278478647 26 25.92775263988353 24.62321327091574 23.855904182634767 25.59312990656597 27 26.804386512227513 24.413060931479283 23.213158864374332 25.569393691918872 28 25.58283985599905 25.186271391773225 23.299849272235708 25.931039479992013 29 25.768098116659292 25.104978124771808 23.884720059267703 25.242203699301193 30 26.529673909978307 24.58819721862361 23.47399577230191 25.408133099096176 31 26.53531382880082 24.28459403882991 23.570584050944525 25.609508081424742 32 25.820538156571992 24.56739301475511 23.157954890734043 26.454113937938857 33 25.599255381313608 23.776385062282817 23.710984414215062 26.913375142188517 34 26.493182514682935 24.3172756876359 24.107889032542893 25.08165276513828 35 26.777736962029714 24.022524565861648 23.812745730982968 25.38699274112567 36 25.876956020025073 24.44557450323427 24.113398224770187 25.56407125197047 37 26.1497450738017 24.383217917312443 24.33494245321902 25.13209455566684 38 26.411366341300624 23.39849182594613 24.29465998666215 25.895481846091094 39 26.000679404790606 24.071416312475407 24.274640142364998 25.653264140368986 40 26.719320849192492 23.444246134274515 24.388503006805067 25.447930009727926 41 25.213985429960704 24.454519937393165 24.651058035698444 25.680436596947683 42 26.263029006177206 24.094648295969492 24.711453722691914 24.930868975161385 43 25.347233180949697 23.51834943853861 24.425367906658224 26.70904947385347 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 74.0 1 100.5 2 127.0 3 139.0 4 151.0 5 151.0 6 229.5 7 308.0 8 370.0 9 432.0 10 646.0 11 860.0 12 860.0 13 1865.0 14 2870.0 15 4494.5 16 6119.0 17 6176.5 18 6234.0 19 6234.0 20 8287.0 21 10340.0 22 11886.0 23 13432.0 24 18100.5 25 22769.0 26 22769.0 27 29616.0 28 36463.0 29 44802.5 30 53142.0 31 65607.0 32 78072.0 33 78072.0 34 97524.0 35 116976.0 36 146034.5 37 175093.0 38 207466.0 39 239839.0 40 239839.0 41 264263.5 42 288688.0 43 314355.0 44 340022.0 45 379768.0 46 419514.0 47 419514.0 48 462764.0 49 506014.0 50 517539.0 51 529064.0 52 518234.5 53 507405.0 54 507405.0 55 486522.5 56 465640.0 57 440984.5 58 416329.0 59 382917.5 60 349506.0 61 349506.0 62 299335.0 63 249164.0 64 215431.0 65 181698.0 66 152348.5 67 122999.0 68 122999.0 69 99644.5 70 76290.0 71 65795.0 72 55300.0 73 44189.5 74 33079.0 75 33079.0 76 25608.5 77 18138.0 78 15455.5 79 12773.0 80 9828.0 81 6883.0 82 6883.0 83 5797.0 84 4711.0 85 3884.0 86 3057.0 87 2836.5 88 2616.0 89 2616.0 90 1821.5 91 1027.0 92 838.0 93 649.0 94 614.5 95 580.0 96 580.0 97 347.5 98 115.0 99 120.0 100 125.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5354687.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.66623408213983 #Duplication Level Percentage of deduplicated Percentage of total 1 81.16780040350017 41.93634575579643 2 9.625667194135904 9.946439488979994 3 3.301002731560369 5.11651139503743 4 1.6323085582850758 3.373409442665477 5 0.9610270419390983 2.482632405404593 6 0.6334141242377596 1.9635673448281012 7 0.4317391417534129 1.5614434892177786 8 0.31800478740164906 1.3144087828107769 9 0.26036487325285923 1.2106865239424005 >10 1.505372715149653 14.296303247925765 >50 0.09862999110091099 3.450140846470108 >100 0.05208042095741151 5.339488763990414 >500 0.006511047481488009 2.3776836410693747 >1k 0.006004624372340496 5.411624214409453 >5k 7.234487195526138E-5 0.21931465745194312 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6414 0.1197829116809255 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.602568366741137E-5 2 0.0 0.0 0.0 0.0 5.602568366741137E-5 3 0.0 0.0 0.0 0.0 5.602568366741137E-5 4 0.0 0.0 0.0 0.0 5.602568366741137E-5 5 0.0 0.0 0.0 1.8675227889137123E-5 5.602568366741137E-5 6 0.0 0.0 0.0 1.8675227889137123E-5 1.6807705100223413E-4 7 0.0 0.0 0.0 3.7350455778274246E-5 1.6807705100223413E-4 8 0.0 0.0 0.0 3.7350455778274246E-5 1.8675227889137125E-4 9 0.0 0.0 0.0 1.1205136733482274E-4 2.6145319044791973E-4 10 0.0 0.0 0.0 1.3072659522395986E-4 2.6145319044791973E-4 11 0.0 0.0 0.0 1.4940182311309698E-4 2.801284183370569E-4 12 0.0 0.0 0.0 2.0542750678050837E-4 3.174788741153311E-4 13 0.0 0.0 0.0 2.427779625587826E-4 3.174788741153311E-4 14 0.0 0.0 0.0 2.427779625587826E-4 3.921797856718796E-4 15 1.8675227889137123E-5 0.0 0.0 2.427779625587826E-4 3.921797856718796E-4 16 1.8675227889137123E-5 0.0 0.0 2.427779625587826E-4 4.2953024145015383E-4 17 1.8675227889137123E-5 0.0 0.0 2.427779625587826E-4 4.2953024145015383E-4 18 1.8675227889137123E-5 0.0 0.0 2.6145319044791973E-4 5.042311530067023E-4 19 1.8675227889137123E-5 0.0 0.0 2.6145319044791973E-4 5.229063808958395E-4 20 1.8675227889137123E-5 0.0 0.0 3.735045577827425E-4 5.229063808958395E-4 21 1.8675227889137123E-5 1.8675227889137123E-5 0.0 5.042311530067023E-4 5.789320645632509E-4 22 1.8675227889137123E-5 1.8675227889137123E-5 1.8675227889137123E-5 5.976072924523879E-4 5.789320645632509E-4 23 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 7.283338876763479E-4 6.723082040089365E-4 24 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 9.150861665677191E-4 7.096586597872107E-4 25 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 9.711118502351304E-4 7.096586597872107E-4 26 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.001213889812793913 7.47009115565485E-4 27 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.002651882360257472 7.843595713437592E-4 28 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.005621243594630274 7.843595713437592E-4 29 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.010925008315145217 8.030347992328963E-4 30 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.019963818613487585 8.030347992328963E-4 31 3.7350455778274246E-5 1.8675227889137123E-5 1.8675227889137123E-5 0.07272133740029996 8.217100271220335E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1445 0.0 17.66782 5 CAAGACG 1515 0.0 17.09571 4 GGTATCA 3090 0.0 16.34466 1 GTACTAG 285 0.0 15.578947 1 TAATCCC 1350 0.0 15.211111 5 TTAGAGT 845 0.0 14.887573 4 TATACTG 735 0.0 14.850341 5 ATTAGAG 885 0.0 14.841807 3 AACGTAT 75 0.004107014 14.8 27 TAGAGTG 890 0.0 14.758427 5 CGCAAGA 1670 0.0 14.622754 2 GTATTAG 1395 0.0 14.587813 1 GACGGAC 1710 0.0 14.497076 7 CACTCTA 1150 0.0 14.478261 9 TATCTAG 1150 0.0 14.478261 1 TTTAATC 1795 0.0 14.325906 3 ATACCGT 1280 0.0 14.308594 6 CGAACGA 835 0.0 14.179641 16 ATTATAC 575 0.0 14.156522 3 TCGTTAC 1065 0.0 14.070422 23 >>END_MODULE